EWM27324.1, cds3350 (CDS) Nannochloropsis gaditana

Overview
NameEWM27324.1
Unique Namecds3350
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:213401..213538 -
Alignment locationCM002461.1:213023..213293 -
Alignment locationCM002461.1:212842..212966 -

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Properties
Property NameValue
Protein idEWM27324.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100192g7.10352.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:213401..213538 -
CM002461.1supercontigCM002461.1:213023..213293 -
CM002461.1supercontigCM002461.1:212842..212966 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM27324.1 vs. NCBI_GenBank
Match: gi|585109524|gb|EWM27324.1| (hypothetical protein Naga_100192g7 [Nannochloropsis gaditana])

HSP 1 Score: 356.681 bits (914), Expect = 1.900e-124
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0 
Query:    1 MLPKPDLFRCTGSCTGSLLSIDGLLKLEKLFFTRHTARTTFALPTRKKVTKSLIENKLPLPRPGSRPLSSEEEKLTGITMLFSETRSLDPFGTCAYPHRPCRARLMTYRTPAFLSFIPSPRQAIQGVKSSRFLFKRGDKANPCSQEPQVLSDDCSFLTNHDGLMKRKNFLLFRREEP 177
            MLPKPDLFRCTGSCTGSLLSIDGLLKLEKLFFTRHTARTTFALPTRKKVTKSLIENKLPLPRPGSRPLSSEEEKLTGITMLFSETRSLDPFGTCAYPHRPCRARLMTYRTPAFLSFIPSPRQAIQGVKSSRFLFKRGDKANPCSQEPQVLSDDCSFLTNHDGLMKRKNFLLFRREEP
Sbjct:    1 MLPKPDLFRCTGSCTGSLLSIDGLLKLEKLFFTRHTARTTFALPTRKKVTKSLIENKLPLPRPGSRPLSSEEEKLTGITMLFSETRSLDPFGTCAYPHRPCRARLMTYRTPAFLSFIPSPRQAIQGVKSSRFLFKRGDKANPCSQEPQVLSDDCSFLTNHDGLMKRKNFLLFRREEP 177
The following BLAST results are available for this feature:
BLAST of EWM27324.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585109524|gb|EWM27324.1|1.900e-124100.00hypothetical protein Naga_100192g7 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3359rna3359Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications