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Properties
| Property Name | Value |
|---|
| Product | atp-dependent clp protease adaptor protein |
| Orig transcript id | gnl|cribi|Naga_100192g8.10355.mrna |
| Orig protein id | gnl|cribi|Naga_100192g8.10355 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:210712..211677 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3358 ID=rna3358|Name=rna3358|organism=Nannochloropsis gaditana|type=mRNA|length=4532bp
TCACAACAGTGGTCGAAACCTTGGCTTAAAAGATGAGTCTTGCGTCAATA
AACTTGCTGCTGGATAAGTCCTCAGATCCAGATAAGGACGCCCGCTTTAT
GGCTACCAATGATTTATGCAGTGAGTTGTCGAAGGACATCAAGTTGGATG
TGACCATGGAGCGGCGGATTTGTCAGGCCGTCCTTAAGCAGCTGGATGAC
GCCTCAAATGACGTACAGTCAATCGCTGTGAAATGCCTCGGCATCTTGTT
CAGGAAAGTCCAAGAAATGCAGGTGATCGAGATCTGCGACAAACTCTGCA
GCCTCCTCCTGGAGGGGAAGGCCGAGCTGCGTGACATCTATTCGATCGGG
CTGAAGACCCTCATCTCCGACGTTCCCGACAGCATGGGGAAAGCCGTTGC
CTCCCACCTTGGCGCCCGGCTGTTGAGCGGGGTGCAGCAAGAACAGGCTC
TGGACGTGAAAATAGAGTGCCTAGACACTCTGACCGACTTGCTGCGACGC
TTCGGTCGGGAGTTGGACGGGCAGTACCCGGCCATGATGAGCACCGGGCT
TACCCACTTGCAGCAAGGGAAGGTCATGGTCCGAAAACGCGCGAACGCCT
TCGTCGGGGCGTTAGCCGCGGTCGTGCCGGACGCCATGCTGGACGCGATG
ATGGAGGAGCTCCTGAAGGAGATCCAGGGGGCGGAGGGGCGGGGTCCACG
GGAGGTACAAAACCTGATTCAGACGGTGGGCACGGTGGCTCGGACAGTCG
GGCATCGGGTGGGGAAGCACCTGTCCCTGGTCGTCCCGCTCTTGCTCCGC
TTTTTGGGGGGGAGTGGGGAAAAAGTGGGGGAGGAGGAGGAGGAGGAGGA
GGAGCAGGATGACGAGAAGAACGAACTGCGGGAGACGATTTTCGCCGCCT
TGGAGAGTGTGGTGCTTCGGTGCCCACGGGAGGTGACCGTCCACTTGCCT
TTGATCATTGCCGCCGCCCTGAAATTCATGAAATGGGATCCGAATTACAC
GTACGCCGAGGAGGAGGAAGCCGGGGAGGGGGAGGGGGAGGGGGGGGCGG
AGGAAGGGGGGGAGGAGGGAGGGTACGAGGAGGACGAGGAGGACTACGCG
GGTTCGGACGACGACGACAGCTCCTGGAAAGTGAGGCGGGCAGCCCTGAA
GGTGTTGGGGGTGATCATTATGTCCCGGCCCGAACTGCTGGAGAGCCTGT
ACGCCCAATGCGCGGACGAATTGATCGGCCGCTTCAAGGAGCGGGAGGAG
AACGTGCGTTTGGACGTGATTGGGTGTTTCTCGTGCTTGTTGAAGGCGAC
TTTGGCATTGGAAGGGCGGGACCGAAAGAGGAAAGCGCAGGTCACCTGGG
GACTGGCGCGACAGGAGTCGGAGGGGGGAGGATCCGAGGATGCCATGCTG
GTGGTGGAGGAAGGGGACGGGGGGGGGGGGGGGCAGGCCCTGTTGGCAAG
TCGTGTGGGCCCGCTCGTCCGCGCCGCCGACAAGCTCCTTCGGAAAACGG
AACCGTCCACCGCCTCCCTCTCCACGTCCTCATCTTCCTCCATGGCCAAG
ACCAAGTCCGCGGTCCTTAGCCTCTTGCAGACCCTGGTGCGTGTCTTGCA
CGGGGGGCTGGAAGGCCACCTTCGCCTAATGGTGGAGGACGTGATCCGTG
CGCTGGACGAGCGAGCCCAGGGCTTGAAGCTCGACGCCTTGGCCCTCCTC
CAGGCGATTGTGGAGGACCATCCGGCCCCCGCCCTCCACCCGTACCTCCC
CAATATGATCCCCGCGGTGACGGCGTGCGCCCAAGAGGAGTGGTACAAAG
TGGTCTCGCAGGCCCTGAGGGTCCTAGGCCTCTTGATCGCCATCCTCCGT
CCTTTCCCTTCCCCAGAGGAAACGGCGATGGCCCAGGAGGATGCAGCGGG
GACGCATGCCGCCGCCTACGTGCCTGCGCTCTACGCCGCGATCTTCCCTC
GATTGGAGGCCAGCGATATCGATCAGGAGATCAAGGAAGGAGCCATCCTG
GCGGTTGGCAAACTTGTGGCCCATGCCGGGGACTGCTTGCCCAAGAACGA
GTTGGCAGGGGTGCTCGCGTTGCTGATGGAGAAGTTGAAGAACGAGATCA
CGCGCACGCCCACCCTTAGAGCCTTGGCGGGCGTGGCGGCCTCGCCTCTG
GGGATCGACCTCTCTCCCATCCTAGCCGAGGCGGTAGAGGAGCTTGCCAT
GTTCCTGCGCCAGCAGTCCCGGCCTTTGAAACTCGCGACCTTGGAAAGCT
TGATTGGCCTGGTGCGCAGCAATGCCCCGGCCATGACGCCCGCCTTGTTC
GAACTCATCTTGAGGGAGACGGCGCCACTGATCTCAGACGCCGACCTCCA
TCTCTCCCACCTGGCTCTCCTCTTGAGCCTCGAAGTCTTGGAGGCGTCTC
CGCAGGCGACCGGACCCGTCGTACAACAGCACGTCTTTCCCAACGTCCTC
CGTCTGGCGGCCTCTCCTTTGTTGCAGGGCTATGCTCTGCGCTCCCTCCT
TTCCTTGATCGATGCCATGGTCGAAGCCCAGATCCCCGGGATGGGGCCCC
CAACCCTCACCGCCGCCTTTGAAGAGATTGCATTGCACTACCCGGCCACG
GCGTCCCTCTCCCTGTCCTCCTCCTCTCCTTCCCAGCCACCGGCCACAGC
CAGCAGAGGGAACGCCGCTCCCAAGCAAGTCATCAACAACTTGGCGGTGT
GCATGGCGCGTGTGGCGGCCCATCCCCGCACGTCGCCCGTCGAGGTGGCG
GCTTTTAGCGACCGGCTGGTCCTCAACCTCCGGAGTCCCGAAGACCCTGT
CCGGCACCTGGCACTCTCCGCCATGGGGGAGCTGGGTGCTCAGCAGGATT
TATCCACCGCGGTCCCAAAGCTGCAAAGTATCATTCTAGAGTCCTTCCAG
GCGGGTGGGAACGAAGAGATCAAAACGGCCGCCGCCTACGCCTTGGGCCG
CGTGACGGCTGGAAACCCGGACGTGTACCTACCTTTGATCCTGCAACGCC
TGGCACGCGACGGGGCGGGGCCAGGAGGTAAGAAAGGAGAAGGAGGGGCC
GCCGAGACCACCGACAGTCAAGGGAGCCCGGGATCGAAACCGCAACAGTA
TCTGCTGTTGTTGTCTTTGAAAGAGGTCATTTTGACGTACACGCTCCACG
GGAAAGATTTCTCGCCGCACGTCTCCGTCGTCCTCCCTTGCCTCTTGGAA
CATTCTCGGTGTCGGGAAGAAGGAGTGAGGAACATGGTAGCGGAGTGTCT
GGGCGCGCTGGCCAACATTGATCCCACCAACGTCTTCGCCACTTTGGAGG
CATGTGTTCGGGAGGAAAGGAAGGGGGGAAGCGAAGAGGAAGGCAAAGAG
CAGGACAAGTACCTGCAAGGGACGGTGGCCAGCGCCTTGAAATTTTCCCT
GTCCTCGTCACCCTCCACGGCAGCCCGCCGCGTCGAAGTGGGAGGCGGCC
AAGCGGCTGTCTACCTAGCCCGGGAGGAGGCAGGCAAAACCTTGCTGAAA
GAGACCGTCTCTCGGGCCTTAAACATCCAGGTGGACGAGAAAACGGGGAC
GGCGGAAGACCTCGAGGTGATCCGCGCGACGCTGCTCTTGGTCAACGCCG
CCGCCCACCACCAGCCGAAGGTCCTCCTCCCTTTCTTCCAAACTCAAGCC
GTCCCGCTCCTCTTCAAAAGCTTGGACCTGCGCCTGCTCCGGAAAGTCAA
TTTAGGGCCCTTCACGCACACGGTGGACGACGGTTTGCCCCTCCGGAAGG
CCGGCTTGGCGACCGTCGCGACCTTGCTAGACACCCTCCCGTCCGTACTG
GACCTGCCCACCTTCATGCCTCATTTGGCCAAGGGTTTGGAGGATAAGCC
CGACGTGCAATTGCTTGCCCATCAAATCCTCATCAAAGCGGCGCGTACCT
CCCCGTCTTCCCTTCTGGCTTCCTTCGACGCCCTTCTTCCCCCCTTGGAA
TCCTTGGCCGGCAAACAGTTGAGCGACACGACGGTGGGCTCGGAGGCCGA
CCGGGCGCTGGACTCGATTCGAAGCGCCATGCGGGCCTTGATAGCCCTGT
CCACGATTGACGGTGCCTCTTCGCACCCTAAGTTCGTGCAAACGCAGCAA
CGACTCATGTCCAAGGAGCCCTTAAAAAAACTTTGGAACGGCCTGACGGC
CGAGCAAAGTGGGGCCGCTGGTAGAGTGAAGTTGTCGTGAAAGGGCGGGA
TCGACGAGGGTTGGCCCCCGAAAGGGAGCAACATATTAGCGCTGGCTTGC
ACCTCATGGATCAGTAAGAGTGCCATGTAACATGGGCGAGGAGTGTCGCC
CCGGGAGGGAGGAGTGCCATCCGCAGTGCCACCTTGGGGTATCCAATGCT
GGGAGGATGGTGTGACGTAAGACGGAAGCCCCCAGTGGAAGACCCCTCTT
CAACGAGGCTATAAGTCTTGTTTGTGCGGCTCTATAATAATAATGATAGC
AATATAGGCATTTAGGAGCCTGTACCGTACGCGCGCAAGCTACGCGCCAA
CACAAAGAAGAGATCCCAAGCAAGCTCGCCAT back to topprotein sequence of rna3358 >rna3358-protein ID=rna3358-protein|Name=rna3358|organism=Nannochloropsis gaditana|type=polypeptide|length=215bp
MHYPHVHQRRPLLSPFLLGLALILPSLQAFLFPPPHPLRPAPAMSSLRLS
SAVASSPASPTFSTVVEPAKPKVAPGTDLGPSPVILVVEETEARSELDGG
WELILYNDEVNSRHHVARTLTSVCQLTDDRAYEVMMTAHRQGSAGRRHWL
RRHESRLARMKRRAIEAACFQWESCTLEWLLRIGMEGDCRVNEERKALVE
RTSGAKRDSARRTLR back to topmRNA from alignment at CM002461.1:210712..211677- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3358 ID=rna3358|Name=rna3358|organism=Nannochloropsis gaditana|type=mRNA|length=966bp|location=Sequence derived from alignment at CM002461.1:210712..211677- (Nannochloropsis gaditana)
ATGCACTATCCCCACGTACACCAGAGACGACCCCTCCTGTCTCCCTTCCT
TCTCGGCCTTGCCCTCATCCTCCCGTCGTTGCAGGCTTTCCTCTTCCCCC
CCCCCCACCCACTTCGCCCAGCCCCTGCCATGTCGTCGCTCCGCCTCTCT
TCTGCCGTGGCCTCCTCCCCTGCCTCCCCGACCTTTTCGACGGTGGTGGA
GCCCGCTAAGCCCAAGGTCGCGCCTGGGACGGATTTGGGGCCCTCCCCCG
TCATATTGGTCGTGGAGGAGACGGAGGCAAGGTCCGAGTTAGACGGGGGC
TGGGAACTCATCCTCTACAACGACGAGGTGAACAGTCGGCACCACGTGGC
ACGAACCTTGACCTCCGTCTGTCAGCTGACGGACGACCGGGCGTATGAGG
TGATGATGACGGCGCACCGGCAAGGTAGGCGTGTGCTCTCTTTTTGAGCG
TCCTGGCTCCGGCGGGTGGCTCTCACGTTCCCTCCCTTTGTTTTATCCTG
GGGCTGATTGCGTTTGGTTTGGTCATTGGTGATTTGTTTTGATCATTGGT
AAAGAGCGGTGCTCGCTGGTTCTGCCTGCGTATAGCCAGGTATGGACTGT
GGCGTCCTTCCTGCTGTGGCCTTGCCTGGAGCTTTGTCGATGTCACCTCA
ATTTTCATATGATTCATGTCTCTCGCGGATTTCCCCCAGGCTTTGCAGTG
GTGGGCGAGTACAGTAAAGAGGTGGCCGAGGGCTATTGTGAGGGTCTGCG
GGGCGCCGGCATTGGCTGCGACGTCACGAAAGCCGACTCGCCCGAATGAA
AAGAAGGGCAATTGAGGCCGCATGTTTCCAATGGGAGTCCTGTACCTTAG
AGTGGCTGTTGCGGATTGGGATGGAAGGGGATTGTAGAGTAAACGAAGAG
AGAAAGGCTTTGGTGGAGCGGACTTCGGGGGCTAAGAGGGATTCGGCCCG
AAGGACTTTGCGCTGA back to topCoding sequence (CDS) from alignment at CM002461.1:210712..211677- >rna3358 ID=rna3358|Name=rna3358|organism=Nannochloropsis gaditana|type=CDS|length=1296bp|location=Sequence derived from alignment at CM002461.1:210712..211677- (Nannochloropsis gaditana)
GGTCTGCGGGGCGCCGGCATTGGCTGCGACGTCACGAAAGCCGACTCGCC
CGAATGAAAAGAAGGGCAATTGAGGCCGCATGTTTCCAATGGGAGTCCTG
TACCTTAGAGTGGCTGTTGCGGATTGGGATGGAAGGGGATTGTAGAGTAA
ACGAAGAGAGAAAGGCTTTGGTGGAGCGGACTTCGGGGGCTAAGAGGGAT
TCGGCCCGAAGGACTTTGCGCTGAATGCACTATCCCCACGTACACCAGAG
ACGACCCCTCCTGTCTCCCTTCCTTCTCGGCCTTGCCCTCATCCTCCCGT
CGTTGCAGGCTTTCCTCTTCCCCCCCCCCCACCCACTTCGCCCAGCCCCT
GCCATGTCGTCGCTCCGCCTCTCTTCTGCCGTGGCCTCCTCCCCTGCCTC
CCCGACCTTTTCGACGGTGGTGGAGCCCGCTAAGCCCAAGGTCGCGCCTG
GGACGGATTTGGGGCCCTCCCCCGTCATATTGGTCGTGGAGGAGACGGAG
GCAAGGTCCGAGTTAGACGGGGGCTGGGAACTCATCCTCTACAACGACGA
GGTGAACAGTCGGCACCACGTGGCACGAACCTTGACCTCCGTCTGTCAGC
TGACGGACGACCGGGCGTATGAGGTGATGATGACGGCGCACCGGCAAGGG
TCTGCGGGGCGCCGGCATTGGCTGCGACGTCACGAAAGCCGACTCGCCCG
AATGAAAAGAAGGGCAATTGAGGCCGCATGTTTCCAATGGGAGTCCTGTA
CCTTAGAGTGGCTGTTGCGGATTGGGATGGAAGGGGATTGTAGAGTAAAC
GAAGAGAGAAAGGCTTTGGTGGAGCGGACTTCGGGGGCTAAGAGGGATTC
GGCCCGAAGGACTTTGCGCTGAATGCACTATCCCCACGTACACCAGAGAC
GACCCCTCCTGTCTCCCTTCCTTCTCGGCCTTGCCCTCATCCTCCCGTCG
TTGCAGGCTTTCCTCTTCCCCCCCCCCCACCCACTTCGCCCAGCCCCTGC
CATGTCGTCGCTCCGCCTCTCTTCTGCCGTGGCCTCCTCCCCTGCCTCCC
CGACCTTTTCGACGGTGGTGGAGCCCGCTAAGCCCAAGGTCGCGCCTGGG
ACGGATTTGGGGCCCTCCCCCGTCATATTGGTCGTGGAGGAGACGGAGGC
AAGGTCCGAGTTAGACGGGGGCTGGGAACTCATCCTCTACAACGACGAGG
TGAACAGTCGGCACCACGTGGCACGAACCTTGACCTCCGTCTGTCAGCTG
ACGGACGACCGGGCGTATGAGGTGATGATGACGGCGCACCGGCAAG back to top
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