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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100192g11.10351.mrna |
| Orig protein id | gnl|cribi|Naga_100192g11.10351 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:199795..201946 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3355 ID=rna3355|Name=rna3355|organism=Nannochloropsis gaditana|type=mRNA|length=2115bp
CGGATCCAGGTCCGTCTTTTCAATTTGAAACGGGTGAGCAAGATGCGGAA
TTTGAATCCAGAGGATGTGGACCACCTGGTTGCCTTGCGAGGCATGGTAA
TTCGCTGCAGCACCATTATTCCCGAGCTCCATTTGGGGTGTTTCCGCTGC
TTTATGTGCGGTTTTGAGGTGCTGGTGGAGAACGACCGGGGCCGGATCGA
GGAGCCTGTCCGCTGCGAGCATTGCCAGGCCAAGGAGGCGATGGAGCTGT
TGACGAACCGGTGCGCCTACACGAACAAACAGATCATCCGGATGCAGGAA
ACCCCCGACGAAATCCCCGAGGGCGAAACTCCGAACAGCCTGACCCTCTT
TGCCTTCGACGAGCTCACGGACGCGGTGCGTCCGGGGGATCGGGTGGAGG
TGACGGGGATCTTGCGGGCGGCTCCCCGCCGGGTCCACCCCCGCTTGACC
ACGCTCCGCTCCGTGTACAAAACCCACGTGGAAGCCCTGCATTTCAGTCA
CGTCGACAAGGACATGAAGGTGGAGGCGGGCCCGGGGGAAGGCACAGGTC
GGTCGGGACTAGCCGGGGGGGACGGCGAAGGGGTGGGGGTGGGGACGACG
GGGTGCGATACTACCCGGATGCGCGGCTTGCACTTGCCGGCGTCGCGGGT
GGCCGAGATCAAGGCCCTGTCCCAAGACCCTTGGATCTACGAAAAATTGT
CCCGGGCAGTGGCCCCTTCGATTTGGGGGATGGAGGACGTGAAGAAAGGG
GTCCTGTGTTTGTTGTTTGGAGGAACGGACAAGAAGGCAGGGGCGCGGAA
AGAGAGGCGTGGGTGGGAGCGGAGGGCGGGAAGGAGGGAGAGGGAGGGAG
GGAGGGCGGGAGGGAGGGCGGGAGGGAGGGCGGGCTTGGCCCCGGAAGGG
ACCGGCCCTGGCATGAACGGCGATAGACGGGAAGGGGAAGAGGAGGAAGA
AGAAGAGGCAGAGGACCCCGGCGCCGTGAGCTGCCGGGGGGACATCAACA
TCCTCCTCTGCGGAGATCCGGGGACGAGCAAATCGCAGATCCTCCTCTAC
GTGCACAACCTGGCCCCCCGGGGCATCTACACCTCGGGGAAAGGCTCCTC
GGCGGTGGGCCTGACCGCCTCCGTCATCCGGGACGTGGAGACGAAGGAGC
TGGTCTTGGAGTCGGGGGCATTGGTGTTGAGCGACCAAGGGGTCTGCTGC
ATCGACGAGTTCGACAAGATGAGCGAAACCACCCGGGCTATCCTCCACGA
GGCCATGGAGCAACAGACCGTCTCCATCGCCAAGGCAGGGATCATCTGCA
CCCTGAATGCCCGCACGTCCATCTTGGCCTCCGCCAATCCGGTCGACTCC
CGGTACAACCCCCGCTTGTCCGTGGTGGAAAACATCCAGTTGCCACCCAC
CCTCTTGTCCCGCTTCGACCTCATCTACTTGGTCCTGGACAGCCCGGACG
AGGACAAGGACCGGCGTCTGGCGCGGCATTTGATCTCGCTCTATTACGAG
GAACCTGCCGTCGAGGCCCCGGATGTCGACCACGCCCTGCTCAAGGACTA
TATTGCCTACGCGCGCGCCCACGTCTTCCCCGTTCTCTCCGAAGAAGCAG
GGGAACAACTCATTCAGGGGTACCTGGGGCTGCGGGGAAGCGGGGGCGAA
GGGAAGACCATCACGGCCACGCCACGCCAGCTGGAATCTTTGATCCGTCT
GTCCGAGGCCCTGGCCAAAATCCGGTTGGCCTCGGTGGTGGAGCGGTCGG
ACGTGGTGGAAGCCATGCGGTTGATGGCGGAGGCCACTTTGAAGGCGGCC
ACTGACCCGGAGACGGGGAAATTGGACCTGGGGAACATCGACGGGACAAG
CCGGGACCGGGAGGCGAGGCAGTTGCTGACGGCGGCCGTGAAGGAATTTC
TGGAACCGCGGAAAGGTCTTCGGATGAGCGTGAGCGAGATCCGGCAAGGG
GTGCAGGCGCAGAGCACGGTCGAAGTCAAGCAGGGATTGCTGGTGGACGT
TTTGAGGAAGGAGCTGGAGCCCGAGGGCGTGGTCAAGTACCTCCCGGCGA
CCCACACGGTCTTGATCCAATAGAAGGAGATGGGGAAAGCCAGCATCGGT
CCACTCCCTGGTGGG back to topprotein sequence of rna3355 >rna3355-protein ID=rna3355-protein|Name=rna3355|organism=Nannochloropsis gaditana|type=polypeptide|length=553bp
MYGPVPAPSHAEQSRSEDSNKVMKFKRQQALTPTPQSPFTDFRHRGNEEE
EEEEEEIVTFRIDGQHVPASNTTSTPGENELHKLKDADDISRAETYQRVP
LTCTQAPAQSSVPIPTTDAVAFGGHPSYSCAKKPQEKAMHNMEAVMEATA
AKSVGETNPLGPASLPSGPCAPFDGSDMKDHDGLSLPKETAGIDKDVKED
QEMDELNGRLSEGLSLKYDFGGEHCPKYSQREVDLLVGKRVEEAKTALVA
AQAMAHTEEMASWEAKLKKAEEDGQRWKAQCHGLEHDLSAELKSVEGAFA
ARLKETQDEVVSKEIQLRAVTAQLADMQQRIAVAEREGEESRQKLEEAGR
KEARLVREMAEKLEAEKARRVKDVMDMKDRVAQRAQEQFAVAQEHFNQLA
STLEGKEAEVSQYKGEMRRAQEEAGEALRQKDDAVAKARDLEAEAAALRV
TAGRMEEEKERQARSAEEKMRKLRTALEKMEDEKSIAIKDREQAYESLSR
TAVSLQEHKRKAEEFEEKYNTLFPKAMEHASMCEELLVMVESLNQKLESQ
EGK back to topmRNA from alignment at CM002461.1:199795..201946+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3355 ID=rna3355|Name=rna3355|organism=Nannochloropsis gaditana|type=mRNA|length=2152bp|location=Sequence derived from alignment at CM002461.1:199795..201946+ (Nannochloropsis gaditana)
CTttattttctccctccgtcaACAGAGCTAGCGCAACGACCACTTTCAAG
TCACTATGTATGgccctgtccccgccccctcccatgccgAACAAAGCAGA
TCTGAGGACTCGAACAAAGTCATGAAGTTCAAACGCCAGCAGGCCTTGAC
ACCCACGCCGCAATCCCCGTTCACTGACTTCCGCCATcggggaaacgagg
aggaggaggaggaggaggaggagatcgttACATTTCGTATTGACGGACAA
CACGTTCCAGCGAGTAACACAACAAGCACGCCGGGGGAAAACGAGCTGCA
CAAATTAAAGGATGCAGACGACATATCGCGCGCAGAGACGTACCAGCGAG
TACCTCTGACATGCACACAGGCTCCGGCACAGTCCTCGGTCCCTATTCCC
ACCACCGACGCTGTCGCGTTCGGGGGCCATCCCTCTTACTCCTGCGCGAA
AAAGCCTCAAGAAAAGGCCATGCACAATATGGAAGCGGTCATGGAGGCAA
CTGCAGCCAAGAGTGTTGGCGAAACGAATCCTTTGGGCCCAGCGTCTCTC
CCCTCAGGTCCCTGCGCCCCCTTTGATGGCAGCGACATGAAAGACCACGA
TGGCTTGAGCCTGCCCAAGGAAACGGCAGGCATCGAcaaggacgtgaagg
aggaccaggagatGGACGAGCTGAATGGTCGCTTGTCGGAAGGACTGTCC
CTGAAATACGATTTCGGCGGAGAACATTGCCCCAAGTACTCTCAGAGAGA
AGTGGACTTATTGGTGGGCAaacgcgtggaggaagccaaGACTGCTTTGG
TGGCCGCTCAAGCCATGGCCCACACGGAAGAGATGGCAAGCTGGGAGGCC
AAGCTGAAAaaagccgaggaggacgggcaacGTTGGAAAGCGCAGTGCCA
TGGCCTCGAGCACGACCTCTCCGCCGAATTGAAGAGCGTGGAAGGCGCGT
TCGCCGCCCGTTTGAAAGAGACTCAGGATGAAGTCGTGTCCAAGGAGATC
CAGCTGAGAGCGGTCACGGCCCAGCTGGCGGACATGCAGCAACGCATTGC
TGtggcagagagagagggtgaGGAAAGTCGTCAGAAgctggaagaagcag
ggCGGAAAGAAGCGCGGCTCGTGCGCGAGATGGCCGAGAAATTGGAAGCA
GAGAAAGCTCGACGGGTCAAAGATGTGATGGACATGAAGGACCGGGTGGC
CCAACGGGCCCAGGAGCAGTTCGCGGTTGCTCAGGAGCACTTTAATCAAT
TAGCCAGCAccttggaagggaaggaggccgaaGTGTCCCAATACAAGGGG
GAGATGCGGCGCGCtcaggaagaagcgggggaggcatTGCGGCAAAAGGA
CGACGCCGTGGCGAAGGCAAGAgatttggaggcggaggcggcagctTTGA
GGGTCACGGCGGGCcgaatggaggaagagaaggagcgacaGGCGAGGTCG
GCAGAagagaagatgagaaagcTGCGGACCGCActggaaaaaatggagga
tgAAAAATCCATTGCCATCAAGGACAGGGAGCAAGCCTACGAGTCCTTGT
CACGCACAGCCGTCTCGCTGCAAGAGCACAAacggaaagcggaggagtTT
GAAGAGAAGTACAATACTTTGTTTCCGAAGGCCATGGAGCATGCCAGCAT
GTGCGAGGAGCTTCTGGTCATGGTGGAATCTCTGAATCAAAAGCTAGAGA
gccaggaggggaaatgagaCAAGTCTTGCAGCTTGGTGCGTGGTACCCGA
GTGAAAAACAGGTCCGATGGCGTGGAAACCGGACTGGCTGAACTCGTGGA
CGCTTTGCGGTGTGTGGACGATTACGATTGGTGGCATGTATTTGAAAGAG
TTTCAAGAGAACGGTAAAGGCAAATAGAACTGTGGATTGACACAAAGAAC
ATATGGCGAAAATATGAATATTGTACGCTATTGCACGTTCGATTCGAAAT
GGAGATTTTGGGATCTAAAAGCTTGTTAAAGCTCTGCTTTCAaagctctt
ctttccttgtGGGGATTGCCAAAATTTGACGGATAGAGAAATGGAACTTT
TCGCTCGAAACACACATTTCTCGTTGAGCCTTTCAGGGAGGCAGGTATCC
TTACGACGGTCTTCTAAAAACAACGACTGGGAGTCCCATTACATATTATT
TC back to topCoding sequence (CDS) from alignment at CM002461.1:199795..201946+ >rna3355 ID=rna3355|Name=rna3355|organism=Nannochloropsis gaditana|type=CDS|length=1662bp|location=Sequence derived from alignment at CM002461.1:199795..201946+ (Nannochloropsis gaditana)
ATGTATGgccctgtccccgccccctcccatgccgAACAAAGCAGATCTGA
GGACTCGAACAAAGTCATGAAGTTCAAACGCCAGCAGGCCTTGACACCCA
CGCCGCAATCCCCGTTCACTGACTTCCGCCATcggggaaacgaggaggag
gaggaggaggaggaggagatcgttACATTTCGTATTGACGGACAACACGT
TCCAGCGAGTAACACAACAAGCACGCCGGGGGAAAACGAGCTGCACAAAT
TAAAGGATGCAGACGACATATCGCGCGCAGAGACGTACCAGCGAGTACCT
CTGACATGCACACAGGCTCCGGCACAGTCCTCGGTCCCTATTCCCACCAC
CGACGCTGTCGCGTTCGGGGGCCATCCCTCTTACTCCTGCGCGAAAAAGC
CTCAAGAAAAGGCCATGCACAATATGGAAGCGGTCATGGAGGCAACTGCA
GCCAAGAGTGTTGGCGAAACGAATCCTTTGGGCCCAGCGTCTCTCCCCTC
AGGTCCCTGCGCCCCCTTTGATGGCAGCGACATGAAAGACCACGATGGCT
TGAGCCTGCCCAAGGAAACGGCAGGCATCGAcaaggacgtgaaggaggac
caggagatGGACGAGCTGAATGGTCGCTTGTCGGAAGGACTGTCCCTGAA
ATACGATTTCGGCGGAGAACATTGCCCCAAGTACTCTCAGAGAGAAGTGG
ACTTATTGGTGGGCAaacgcgtggaggaagccaaGACTGCTTTGGTGGCC
GCTCAAGCCATGGCCCACACGGAAGAGATGGCAAGCTGGGAGGCCAAGCT
GAAAaaagccgaggaggacgggcaacGTTGGAAAGCGCAGTGCCATGGCC
TCGAGCACGACCTCTCCGCCGAATTGAAGAGCGTGGAAGGCGCGTTCGCC
GCCCGTTTGAAAGAGACTCAGGATGAAGTCGTGTCCAAGGAGATCCAGCT
GAGAGCGGTCACGGCCCAGCTGGCGGACATGCAGCAACGCATTGCTGtgg
cagagagagagggtgaGGAAAGTCGTCAGAAgctggaagaagcagggCGG
AAAGAAGCGCGGCTCGTGCGCGAGATGGCCGAGAAATTGGAAGCAGAGAA
AGCTCGACGGGTCAAAGATGTGATGGACATGAAGGACCGGGTGGCCCAAC
GGGCCCAGGAGCAGTTCGCGGTTGCTCAGGAGCACTTTAATCAATTAGCC
AGCAccttggaagggaaggaggccgaaGTGTCCCAATACAAGGGGGAGAT
GCGGCGCGCtcaggaagaagcgggggaggcatTGCGGCAAAAGGACGACG
CCGTGGCGAAGGCAAGAgatttggaggcggaggcggcagctTTGAGGGTC
ACGGCGGGCcgaatggaggaagagaaggagcgacaGGCGAGGTCGGCAGA
agagaagatgagaaagcTGCGGACCGCActggaaaaaatggaggatgAAA
AATCCATTGCCATCAAGGACAGGGAGCAAGCCTACGAGTCCTTGTCACGC
ACAGCCGTCTCGCTGCAAGAGCACAAacggaaagcggaggagtTTGAAGA
GAAGTACAATACTTTGTTTCCGAAGGCCATGGAGCATGCCAGCATGTGCG
AGGAGCTTCTGGTCATGGTGGAATCTCTGAATCAAAAGCTAGAGAgccag
gaggggaaatga back to top
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