EWM27323.1, cds3346 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM27323.1 vs. NCBI_GenBank
Match: gi|585109523|gb|EWM27323.1| (hypothetical protein Naga_100192g11 [Nannochloropsis gaditana]) HSP 1 Score: 1127.85 bits (2916), Expect = 0.000e+0 Identity = 553/553 (100.00%), Postives = 553/553 (100.00%), Query Frame = 0
Query: 1 MYGPVPAPSHAEQSRSEDSNKVMKFKRQQALTPTPQSPFTDFRHRGNEEEEEEEEEIVTFRIDGQHVPASNTTSTPGENELHKLKDADDISRAETYQRVPLTCTQAPAQSSVPIPTTDAVAFGGHPSYSCAKKPQEKAMHNMEAVMEATAAKSVGETNPLGPASLPSGPCAPFDGSDMKDHDGLSLPKETAGIDKDVKEDQEMDELNGRLSEGLSLKYDFGGEHCPKYSQREVDLLVGKRVEEAKTALVAAQAMAHTEEMASWEAKLKKAEEDGQRWKAQCHGLEHDLSAELKSVEGAFAARLKETQDEVVSKEIQLRAVTAQLADMQQRIAVAEREGEESRQKLEEAGRKEARLVREMAEKLEAEKARRVKDVMDMKDRVAQRAQEQFAVAQEHFNQLASTLEGKEAEVSQYKGEMRRAQEEAGEALRQKDDAVAKARDLEAEAAALRVTAGRMEEEKERQARSAEEKMRKLRTALEKMEDEKSIAIKDREQAYESLSRTAVSLQEHKRKAEEFEEKYNTLFPKAMEHASMCEELLVMVESLNQKLESQEGK 553
MYGPVPAPSHAEQSRSEDSNKVMKFKRQQALTPTPQSPFTDFRHRGNEEEEEEEEEIVTFRIDGQHVPASNTTSTPGENELHKLKDADDISRAETYQRVPLTCTQAPAQSSVPIPTTDAVAFGGHPSYSCAKKPQEKAMHNMEAVMEATAAKSVGETNPLGPASLPSGPCAPFDGSDMKDHDGLSLPKETAGIDKDVKEDQEMDELNGRLSEGLSLKYDFGGEHCPKYSQREVDLLVGKRVEEAKTALVAAQAMAHTEEMASWEAKLKKAEEDGQRWKAQCHGLEHDLSAELKSVEGAFAARLKETQDEVVSKEIQLRAVTAQLADMQQRIAVAEREGEESRQKLEEAGRKEARLVREMAEKLEAEKARRVKDVMDMKDRVAQRAQEQFAVAQEHFNQLASTLEGKEAEVSQYKGEMRRAQEEAGEALRQKDDAVAKARDLEAEAAALRVTAGRMEEEKERQARSAEEKMRKLRTALEKMEDEKSIAIKDREQAYESLSRTAVSLQEHKRKAEEFEEKYNTLFPKAMEHASMCEELLVMVESLNQKLESQEGK
Sbjct: 1 MYGPVPAPSHAEQSRSEDSNKVMKFKRQQALTPTPQSPFTDFRHRGNEEEEEEEEEIVTFRIDGQHVPASNTTSTPGENELHKLKDADDISRAETYQRVPLTCTQAPAQSSVPIPTTDAVAFGGHPSYSCAKKPQEKAMHNMEAVMEATAAKSVGETNPLGPASLPSGPCAPFDGSDMKDHDGLSLPKETAGIDKDVKEDQEMDELNGRLSEGLSLKYDFGGEHCPKYSQREVDLLVGKRVEEAKTALVAAQAMAHTEEMASWEAKLKKAEEDGQRWKAQCHGLEHDLSAELKSVEGAFAARLKETQDEVVSKEIQLRAVTAQLADMQQRIAVAEREGEESRQKLEEAGRKEARLVREMAEKLEAEKARRVKDVMDMKDRVAQRAQEQFAVAQEHFNQLASTLEGKEAEVSQYKGEMRRAQEEAGEALRQKDDAVAKARDLEAEAAALRVTAGRMEEEKERQARSAEEKMRKLRTALEKMEDEKSIAIKDREQAYESLSRTAVSLQEHKRKAEEFEEKYNTLFPKAMEHASMCEELLVMVESLNQKLESQEGK 553
BLAST of EWM27323.1 vs. NCBI_GenBank
Match: gi|553188544|ref|XP_005854816.1| (hypothetical protein NGA_2042120, partial [Nannochloropsis gaditana CCMP526] >gi|553190887|ref|XP_005855285.1| hypothetical protein NGA_2042110, partial [Nannochloropsis gaditana CCMP526] >gi|422293776|gb|EKU21076.1| hypothetical protein NGA_2042110, partial [Nannochloropsis gaditana CCMP526] >gi|422294244|gb|EKU21544.1| hypothetical protein NGA_2042120, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 322.398 bits (825), Expect = 1.979e-105 Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0
Query: 246 TALVAAQAMAHTEEMASWEAKLKKAEEDGQRWKAQCHGLEHDLSAELKSVEGAFAARLKETQDEVVSKEIQLRAVTAQLADMQQRIAVAEREGEESRQKLEEAGRKEARLVREMAEKLEAEKARRVKDVMDMKDRVAQRAQEQFAVAQEHFNQLASTLEGKEAE 409
TALVAAQAMAHTEEMASWEAKLKKAEEDGQRWKAQCHGLEHDLSAELKSVEGAFAARLKETQDEVVSKEIQLRAVTAQLADMQQRIAVAEREGEESRQKLEEAGRKEARLVREMAEKLEAEKARRVKDVMDMKDRVAQRAQEQFAVAQEHFNQLASTLEGKEAE
Sbjct: 1 TALVAAQAMAHTEEMASWEAKLKKAEEDGQRWKAQCHGLEHDLSAELKSVEGAFAARLKETQDEVVSKEIQLRAVTAQLADMQQRIAVAEREGEESRQKLEEAGRKEARLVREMAEKLEAEKARRVKDVMDMKDRVAQRAQEQFAVAQEHFNQLASTLEGKEAE 164
BLAST of EWM27323.1 vs. NCBI_GenBank
Match: gi|298708937|emb|CBJ30891.1| (expressed unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 64.3142 bits (155), Expect = 4.195e-7 Identity = 90/331 (27.19%), Postives = 150/331 (45.32%), Query Frame = 0
Query: 214 LSLKYDFGGE-HCPKYSQREVDLLVGKRVEEAKTAL---VAAQAMAHTEEMASWEAKLKKAEEDGQRWKA---QCHGLEHDLSAELKSVEGAFAARLKETQDEVVSKEIQLRAVTAQLADMQQRIAVAEREGEESRQKLEEAGRKEARLVREMAE-----------KLE-AEKARRVKDVMDMKDRVAQRAQEQFAVAQEHFNQLASTLEGKEAE---VSQYKGEMRRAQEEAGEALRQKDDAVAKARDLEAEAAALRVTAGRMEEEKERQARSAEEKMRKLRTALEKMEDEKSIAIKDREQAYESLSRTAVSLQEHKRKAEEFEEKYNTL 522
L + +G E H K+SQ EVD + +R+ E ++A V+ H ++ + KL+++ DG R K LE ++ A L G AA K + ++ KE L AVTAQL ++ +A E +Q++ E E R R +AE KLE +E+ +R ++ MK+ + AQ+QFA A + L + LE EA+ + + E E AG+ + V ++ + EAAA +A R E +++A + +E M E+ A R+ + ++L+R A+ + K + E K L
Sbjct: 680 LGMAEAYGHEDHRAKFSQAEVDAKIKERLAEEQSAFEKTVSGLKSTHEADLQAAADKLQQSSSDGNRAKIAARDAEALEREI-AMLSERYGEAAAEAKHSGKILLEKEALLDAVTAQLMGLKSDLATTRAEHAAEKQRMTETADSE-RRARSLAESRLQQLEVAYNKLEDSEREKRAAGILKMKNDMKALAQQQFAGANKQHAALRARLERSEAQTRLLEEAAKEFNAKLETAGQKSTELSGQVEALQNEKVEAAA---SASRREHVLQQEATALRNDAESRLDEMEAMARERDAANSGRDVSQDALARMAIRNTQLKESVADLEGKVKEL 1005 The following BLAST results are available for this feature:
BLAST of EWM27323.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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