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Properties
| Property Name | Value |
|---|
| Product | ataxin 10 |
| Orig transcript id | gnl|cribi|Naga_100393g3.8505.mrna |
| Orig protein id | gnl|cribi|Naga_100393g3.8505 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:191310..193590 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3352 ID=rna3352|Name=rna3352|organism=Nannochloropsis gaditana|type=mRNA|length=3270bp
TAGGTCTCTTTTTCTTGAACTTATACAACCGGAACAGTGACCTGCAAAGT
ACAAGGATCGGCATCGTTGGCCCTAACAAAAAGTGTGATAAAACGGTGCA
AACCTTCTCCGTTCCTCTTCTTTGGGACACTATCGACTGTCTAGGGTGCC
CTTATCTTAGTAGAACTCATGCTGGCCCATACAGAGCAGCAACGACGCCA
AGCGGGGCCGGGGTCCATCAGGAGAAAGATGGGAACAGCGGCCGCTGTCT
TTGCACTGGCTGCTGTGGCGATAGCCCCAATAACTGCCTCGACCTCTGGA
ATGATGACGGCACCGATTCAAATGCAGGCCCGTCGTCCTCTCCCACCGCA
CAAGTTGCGGATGCTTTTCGGGGAGGACCACGAAGGGTATCGTCGTTTTC
TTGAGGAGTCGGCACCCCCTTCCAGGGCTATCGCCGCCGACGGCAGCACT
GGCAGCCCTCCCGAAGCAGACCTACCCTTACACGCCGGATACGGCACACA
CTACGCATTTGTGTTCGTGGGAACGCCCGCACAGCGTGTCTCGGTCATTT
TGGACACGGGTAGTCACTGGACGGCTTTTCCGTGCACGGGGTGTCAGATG
TGTGGGGACGACCACACGGACCCCGTGTTCGACGTCCTCAAGTCCGACAC
TTTCCACGCGTTGGACTGCTCGGAATGCAAGTTTTCCGGGCACTGCAAGG
ACAACAAATGCTCCATCTCCCTCGCTTACGCGGAAGGGAGCCGATGGGAT
GCCTACGAGGTCCGGGACACGTTGTTCTTGGGGGGGGAAAGCCCCCAGGC
ACCCGTCCGGGGGGGACAGGACCTGAGCATGCCCTTCGTCTTTGGGTGCC
AGACGTACGAGACGGGCCTGTTCCGCACGCAGTTGGAGAACGGGATCATG
GGCCTCTCTTTTCAAGATTTGACCATCGTGCCCAGACTCCGGGAGGCTGG
GAAGATTGACGCCACGGTCTTCTCCCTCTGTTTCACCGAGGACGGGGGCT
CCATGCGCATAGGCGGGTACGAAACAGAGCACCACACCAAACCTCTGCAG
TGGGTGCCTCTGACCAAGCCGACCGGGTGGTACACGGTCACCCTGAAGGA
CATCAAAATCGGCAACACTAGCATCGGCGTTGACCCCAACTTGTTCAACG
CGGGGCAGGGGACCATTGTGGACAGCGGAACGACCGACACCTACCTGCCC
CGGAGCGTGGCCTCCGCCTTCCAACGCGTCTTCCAAGACGTGGCGGGGAT
CGCCTACAGCTCCCGTTCCATGCGCTTGTCCCCCTCGGAAATGGAGGCCC
TGCCCCCCCTGGTCTTCGTCCTTGACAACGGCGTGGAGGTTCCCATGCCC
CGGGAAAATTACTTGGAATGCTTGGAGAACGGGGCCTCGTGCGCCGGCTC
GGTCTTCTTGGACAACGGGTCCGGGGCGGTGCTGGGTGCGAATTTCATGC
GCGGGCAGGACGTGGTCTTCAATCTGGACGATAAACAAATCGGCTTCGCG
CCGGCTTCCTGTGCCTACGTGGAAGGCGAGAGCAGCCCGGCGCCGGTCGT
ATCGACCGCGGCGGCGAGCGCTGGGGAAGGCGGGAAGGAGGATCTGGACT
GTGAAATGGCCGTGGGCGACCCTGTGGGGGAGTGCTCGGCGGTCTGCCCG
GAGGACGGGAAGGAGGCGGGGGTCCTTGAGGGGGAACAGAAGATGGAGAT
GAAAATTTCCCGCCCTGCCTCGGGTAACGGGAAAGCGTGCCCGCCATTGC
CATTGAAGGAGAAGACCGTGCCCTGCCAGGTCACATGCAACGGCACTGTG
GCCCCCGCGGGGAAAGGAAGCGCCGCCGCCCCCGTCACCACCTGCTCCAA
CGCGGTCGTCTGGGGACCCTGCGATGCTTCCTGCCAACAGACAGGGGAGG
CCATGGAGAAAAAGGAAGAACAAGGCGTGGTGTCCTGCCAAAAGACGACA
CGGACCCGTCCGTGCGCCACCGGCTTGGCTTGCCCGGCGGCCCAGGAGGG
AAGCGTCATGGACGTGGTTTTCGTTTTGGAGGGGGACGGTTTGGGGGAAG
AGGGGGGCCTGTCCGAGGAGGAAGAAGCCTTCTTGCTCTCCCACCTGAGC
GAGATTTTGATGTTGTCGGGTGGGAACATGGAGGTGGTGCCGTCCGAGAG
GAAAGCGGCGGCCGGTGAGACGATTGTCAAGGTCCGAGTCCACTTGACGG
AGGAGCAGGCGGAGCTCAAGCAGAACAAACTGACAGGGGTGGAGGACCCG
CTGGCGGTGCAAGAAGAGGAAGACGAAGGGCTGAAAGCCGGCATGTCCGC
CCAGGCGAAGAGCCTCCACGCACGCGTGCAGGAGCCGACGTTTGCGGCAG
GTTTGATGGACGGTCTGAAAGCTTCATCCGGCGCGTTGGGTGGTTTGAAA
GCCTTGAGGGTGGACAATATTGTCGTGGAGGACGTGGGCGGCGGGACCTG
GAAGGACGCGGCAGAGGATGGTGGGGAAAATGCCCATCCGATGATTTGGA
AGTTACTGGGTGGTGTGGGGGCCTTGTTCGTGGGATTGATGATGTTTGTC
CACATGCGGCGAACGGGAGGACCGGGTGGAAGAGCGGGAGGGATGGGGGT
GAGTCCGCGGGTGGCGGCGGCGGCGGCCATGGACCGTGTGCGGCGTGGCA
CGGAGAGCATGCAGGCGGGGTTGGTCGGAGGGGGAGGGGGAGGGGGAGGG
AATGGAGGGGGGGGGGGGGCGGGAAACCCAACCCCAGGGCGTACGAACTC
GTAGAGCATGGGCAAGCGAAGAAGGTGATGGGGGGGGAGGATGAGGAGGA
GGAGGAGGACATCGAGATGCTTTAACCTTGGTTTGGCGCGCAAGGAGATA
GAGGATGTCAGCTGCCCGTCTAGAGACTGGGCGGGGGCCAGAAAGCACGC
ACATAGACGCGGATGAGGAGATACACCCACACACCCACACGCCACCACCC
CCTCTGCAACCGTTTCGCACGTTCATTCACACACTGTCACACACACATGC
ACACATTCCTGTCGTACTCATGCCCGCACGAGCATAGATTCGATAGGAAG
GCATATAAAGCTATTGAAATACTAGGAAGATTGCTACGTATAGTGCACCT
TGTAGTTTTTAAAAAAGTATATTTTATTGAAAATGGCTGTGAGGCTTCAT
GTGGAAAGGCTTAGCAACGCAACATGAAGGCACAGTTCCAAAAAAGTACT
TTTAAAACTGAAGAGAAATAGATCTGATGCTTGTCAAAGAAAGAGAGAAA
GACTTTTGAAGTATAATTCA back to topprotein sequence of rna3352 >rna3352-protein ID=rna3352-protein|Name=rna3352|organism=Nannochloropsis gaditana|type=polypeptide|length=596bp
MTNALGLHATQIHASMSWLREYREEEPEEVEEGHAKAHSGLLQLATAGKV
TMELREARDACRIGGQATQTQLFPLYGKVKNILSRILFFYTSFNAVDDRF
GVAEADTREVRRMALTALQFLANVTAGNAETSERLFKDARQGAIMDWLEG
FGQDRKLLTCTCVVVHNYLACASQKKAAVKDFLEEAALVTKLLRLVLPPS
TPSYPSSSVSSSCRAMGISAPRHHDRHRGPAGQAEGEEEDPVFEWIYLIL
LKVLEAQEGLRAFNKSGLDRYALHKEMLTSIRSVSAKAPGPRRAPPPIFT
AEQLVLLHLAEHTLTDRFLETQGQQRDDAPLLLRDGGVWVLELVHRVKEY
LHARRFSARPSTASGAKASKGKEGQYEQARQPEWLLLDEAVATVMRLIGT
LLAREERLEGGREKGKEDGRELRDLLLEHDVISLILQLLQGEGGKANGEI
PPMDRARSHGGPASTAGPDGTQPSPSLPTPEGRKTRLIQVLGNLCHGHGR
AQEMVREQQGLPLVLNHCNVDSENPFLREWAVVCVRFLCDDPENRRVIAS
LQGQEVVQSPVMQEMGVDARLVAAEQGRLRLHVKRRSVEGGDKAGP back to topmRNA from alignment at CM002461.1:191310..193590+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3352 ID=rna3352|Name=rna3352|organism=Nannochloropsis gaditana|type=mRNA|length=2281bp|location=Sequence derived from alignment at CM002461.1:191310..193590+ (Nannochloropsis gaditana)
tgaAAGTTATACTGCGTCTCAACCTTACCTTACTGTGattctttttttaa
aatgacCAACGCGTTGGGTTTACATGCAACCCAGATCCATGCATCCATGA
GCTGGTTGCGAGAATAtcgggaagaagagcccGAAGAAGTTGAAGAGGGG
CATGCAAAAGCACACTCAGGGTTGTTGCAGTTGGCCACGGCAGGGAAAGT
AACGATGGAATTGCGGGAAGCGCGCGACGCATGCAGGATAGGAGGCCAGG
TATGTATTTGACAAGACCAAGGATTTACAGTTAATGGGCAGGTCATTGTA
CAACTTTAGGAGGGATGGCTTGTTGAAATTGGTATCTCCCCAAATCACCC
CCTACGGCACACAGGCAACCCAGACACAATTATTCCCTCTCTATGGAAAA
GTGAAAAATATTCTGTCGCGTATACTGTTCTTTTATACAAGCTTCAACGC
AGTCGATGATCGCTTTGGGGTCGCCGAAGCGGACACCAGAGAGGTTCGGC
GCATGGCCTTAACAGCCCTGCAATTTTTGGCTAACGTGACTGCCGGGAAC
GCAGAGACCTCAGAACGGCTTTTCAAAGACGCACGCCAAGGGGCGATCAT
GGATTGGCTGGAGGGTTTTGGACAGGATCGAAAGTTGTTGACGTGCACGT
GTGTGGTCGTACACAATTATCTTGCCTGTGCGTCTCAAAAGAAAGCCGCG
GTCAAGGATTTTTTAGAGGAAGCCGCCTTGGTCACCAAACTCCTCCGGCT
CGTCTTACCACCATCGACACCTTCGTATCCTTCATCCTCCGTGTCCTCAT
CCTGCCGCGCCATGGGTATTTCGGCGCCGCGCCATCATGACAGGCATCGG
GGCCCTGCAGGGCAAgccgagggggaagaagaggacccGGTGTTTGAATG
GATCTATTTGATCCTGCTTAAGGTGCTAGAAGCACAGGAAGGACTCAGAG
CCTTTAATAAAAGTGGATTGGATAGATATGCGCTGCATAAAGAGATGTTG
ACGTCGATACGGTCCGTCTCGGCGAAGGCGCCCGGCCCACGCCGGGCTCC
CCCACCCATCTTCACTGCAGAGCAGCTAGTGCTGCTTCACCTTGCAGAGC
ACACCTTGACAGACAGGTTTTTAGAAACACAAGGACAGCAAAGAGACGAT
GCACCCTTGTTGTTGCGGGACGGCGGCGTGTGGGTCCTCGAACTTGTGCA
CCGGGTCAAGGAATATCTCCACGCGAGAAGATTCTCGGCCCGACCAAGCA
CGGCCTCGGGTGCAAAGGCAAGCAAGGGTAAAGAGGGACAGTATGAACAA
GCGAGGCAACCCGAATGGCTCCTGCTGGACGAGGCTGTCGCCACGGTCAT
GCGCCTGATCGGTACCCTCCTtgccagggaggaaaggctggagggagggc
gggagaaagggaaggaggacgggcgcgaACTTAGGGATCTATTGCTTGAG
CACGACGTCATCAGTCTCATCCTGCAACTActgcaaggggaaggggggaa
agcgaacGGAGAGATCCCTCCCATGGACCGCGCGCGGAGCCACGGGGGCC
CCGCAAGCACAGCCGGCCCCGACGGCACTCAGCcatcgccctctcttccc
acccCAGAAGGTCGAAAAACCCGCTTGATTCAGGTATTGGGCAATCTCTG
ccacggccatggccgcgcGCAGGAGATGGTGCGGGAGCAACAGGGGTTGC
CTCTAGTGTTGAACCACTGCAATGTGGATTCCGAGAACCCTTTCCTGAGG
GAGTGGGCAGTGGTGTGCGTCCGTTTCCTGTGCGACGACCCGGAAAATCG
ACGCGTGATTGCCTCGCTCCAAGGGCAAGAGGTTGTACAGAGCCCAGTCA
TGCAAGAGATGGGGGTGGATGCCCGGCTGGTAGCGGCCGAGCAGGGACGG
CTCAGGCTCCatgtcaagaggaggagtgtcgaggggggggataaAGCAGG
ACCTTGAAGCCCTCCGCAATTTTGATGAGAGGCCAACCAGTGACGCAAAA
AGAAATAAGGGGCACAGTCTCTTCCTGCTCTGCCAGCCCGAGACCCGACG
CGAGGACCCTCTAGAAGGTCAAAGGGAGAAGCGGTACGTTGGTTGACTTG
ACCGTGACAAGGTTCGCGTCCTTCGGCCTTCTCAGCCTCTCCTGTCTCCA
CCGTCGccgccctttctctttcagcaACGCCAGTGCTCCTCTGTACAtaa
ccctctccctcgcaaATTCTCAGGCTCACCCTCCGTCACCATGGTacacc
cccccaaaaaataacACAATGGCTGCTTATC back to topCoding sequence (CDS) from alignment at CM002461.1:191310..193590+ >rna3352 ID=rna3352|Name=rna3352|organism=Nannochloropsis gaditana|type=CDS|length=3582bp|location=Sequence derived from alignment at CM002461.1:191310..193590+ (Nannochloropsis gaditana)
atgacCAACGCGTTGGGTTTACATGCAACCCAGATCCATGCATCCATGAG
CTGGTTGCGAGAATAtcgggaagaagagcccGAAGAAGTTGAAGAGGGGC
ATGCAAAAGCACACTCAGGGTTGTTGCAGTTGGCCACGGCAGGGAAAGTA
ACGATGGAATTGCGGGAAGCGCGCGACGCATGCAGGATAGGAGGCCAGGC
AACCCAGACACAATTATTCCCTCTCTATGGAAAAGTGAAAAATATTCTGT
CGCGTATACTGTTCTTTTATACAAGCTTCAACGCAGTCGATGATCGCTTT
GGGGTCGCCGAAGCGGACACCAGAGAGGTTCGGCGCATGGCCTTAACAGC
CCTGCAATTTTTGGCTAACGTGACTGCCGGGAACGCAGAGACCTCAGAAC
GGCTTTTCAAAGACGCACGCCAAGGGGCGATCATGGATTGGCTGGAGGGT
TTTGGACAGGATCGAAAGTTGTTGACGTGCACGTGTGTGGTCGTACACAA
TTATCTTGCCTGTGCGTCTCAAAAGAAAGCCGCGGTCAAGGATTTTTTAG
AGGAAGCCGCCTTGGTCACCAAACTCCTCCGGCTCGTCTTACCACCATCG
ACACCTTCGTATCCTTCATCCTCCGTGTCCTCATCCTGCCGCGCCATGGG
TATTTCGGCGCCGCGCCATCATGACAGGCATCGGGGCCCTGCAGGGCAAg
ccgagggggaagaagaggacccGGTGTTTGAATGGATCTATTTGATCCTG
CTTAAGGTGCTAGAAGCACAGGAAGGACTCAGAGCCTTTAATAAAAGTGG
ATTGGATAGATATGCGCTGCATAAAGAGATGTTGACGTCGATACGGTCCG
TCTCGGCGAAGGCGCCCGGCCCACGCCGGGCTCCCCCACCCATCTTCACT
GCAGAGCAGCTAGTGCTGCTTCACCTTGCAGAGCACACCTTGACAGACAG
GTTTTTAGAAACACAAGGACAGCAAAGAGACGATGCACCCTTGTTGTTGC
GGGACGGCGGCGTGTGGGTCCTCGAACTTGTGCACCGGGTCAAGGAATAT
CTCCACGCGAGAAGATTCTCGGCCCGACCAAGCACGGCCTCGGGTGCAAA
GGCAAGCAAGGGTAAAGAGGGACAGTATGAACAAGCGAGGCAACCCGAAT
GGCTCCTGCTGGACGAGGCTGTCGCCACGGTCATGCGCCTGATCGGTACC
CTCCTtgccagggaggaaaggctggagggagggcgggagaaagggaagga
ggacgggcgcgaACTTAGGGATCTATTGCTTGAGCACGACGTCATCAGTC
TCATCCTGCAACTActgcaaggggaaggggggaaagcgaacGGAGAGATC
CCTCCCATGGACCGCGCGCGGAGCCACGGGGGCCCCGCAAGCACAGCCGG
CCCCGACGGCACTCAGCcatcgccctctcttcccacccCAGAAGGTCGAA
AAACCCGCTTGATTCAGGTATTGGGCAATCTCTGccacggccatggccgc
gcGCAGGAGATGGTGCGGGAGCAACAGGGGTTGCCTCTAGTGTTGAACCA
CTGCAATGTGGATTCCGAGAACCCTTTCCTGAGGGAGTGGGCAGTGGTGT
GCGTCCGTTTCCTGTGCGACGACCCGGAAAATCGACGCGTGATTGCCTCG
CTCCAAGGGCAAGAGGTTGTACAGAGCCCAGTCATGCAAGAGATGGGGGT
GGATGCCCGGCTGGTAGCGGCCGAGCAGGGACGGCTCAGGCTCCatgtca
agaggaggagtgtcgaggggggggataaAGCAGGACCTTGAatgacCAAC
GCGTTGGGTTTACATGCAACCCAGATCCATGCATCCATGAGCTGGTTGCG
AGAATAtcgggaagaagagcccGAAGAAGTTGAAGAGGGGCATGCAAAAG
CACACTCAGGGTTGTTGCAGTTGGCCACGGCAGGGAAAGTAACGATGGAA
TTGCGGGAAGCGCGCGACGCATGCAGGATAGGAGGCCAGGCAACCCAGAC
ACAATTATTCCCTCTCTATGGAAAAGTGAAAAATATTCTGTCGCGTATAC
TGTTCTTTTATACAAGCTTCAACGCAGTCGATGATCGCTTTGGGGTCGCC
GAAGCGGACACCAGAGAGGTTCGGCGCATGGCCTTAACAGCCCTGCAATT
TTTGGCTAACGTGACTGCCGGGAACGCAGAGACCTCAGAACGGCTTTTCA
AAGACGCACGCCAAGGGGCGATCATGGATTGGCTGGAGGGTTTTGGACAG
GATCGAAAGTTGTTGACGTGCACGTGTGTGGTCGTACACAATTATCTTGC
CTGTGCGTCTCAAAAGAAAGCCGCGGTCAAGGATTTTTTAGAGGAAGCCG
CCTTGGTCACCAAACTCCTCCGGCTCGTCTTACCACCATCGACACCTTCG
TATCCTTCATCCTCCGTGTCCTCATCCTGCCGCGCCATGGGTATTTCGGC
GCCGCGCCATCATGACAGGCATCGGGGCCCTGCAGGGCAAgccgaggggg
aagaagaggacccGGTGTTTGAATGGATCTATTTGATCCTGCTTAAGGTG
CTAGAAGCACAGGAAGGACTCAGAGCCTTTAATAAAAGTGGATTGGATAG
ATATGCGCTGCATAAAGAGATGTTGACGTCGATACGGTCCGTCTCGGCGA
AGGCGCCCGGCCCACGCCGGGCTCCCCCACCCATCTTCACTGCAGAGCAG
CTAGTGCTGCTTCACCTTGCAGAGCACACCTTGACAGACAGGTTTTTAGA
AACACAAGGACAGCAAAGAGACGATGCACCCTTGTTGTTGCGGGACGGCG
GCGTGTGGGTCCTCGAACTTGTGCACCGGGTCAAGGAATATCTCCACGCG
AGAAGATTCTCGGCCCGACCAAGCACGGCCTCGGGTGCAAAGGCAAGCAA
GGGTAAAGAGGGACAGTATGAACAAGCGAGGCAACCCGAATGGCTCCTGC
TGGACGAGGCTGTCGCCACGGTCATGCGCCTGATCGGTACCCTCCTtgcc
agggaggaaaggctggagggagggcgggagaaagggaaggaggacgggcg
cgaACTTAGGGATCTATTGCTTGAGCACGACGTCATCAGTCTCATCCTGC
AACTActgcaaggggaaggggggaaagcgaacGGAGAGATCCCTCCCATG
GACCGCGCGCGGAGCCACGGGGGCCCCGCAAGCACAGCCGGCCCCGACGG
CACTCAGCcatcgccctctcttcccacccCAGAAGGTCGAAAAACCCGCT
TGATTCAGGTATTGGGCAATCTCTGccacggccatggccgcgcGCAGGAG
ATGGTGCGGGAGCAACAGGGGTTGCCTCTAGTGTTGAACCACTGCAATGT
GGATTCCGAGAACCCTTTCCTGAGGGAGTGGGCAGTGGTGTGCGTCCGTT
TCCTGTGCGACGACCCGGAAAATCGACGCGTGATTGCCTCGCTCCAAGGG
CAAGAGGTTGTACAGAGCCCAGTCATGCAAGAGATGGGGGTGGATGCCCG
GCTGGTAGCGGCCGAGCAGGGACGGCTCAGGCTCCatgtcaagaggagga
gtgtcgaggggggggataaAGCAGGACCTTGA back to top
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