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Properties
| Property Name | Value |
|---|
| Product | Peptidase aspartic |
| Orig transcript id | gnl|cribi|Naga_100892g2.34.mrna |
| Orig protein id | gnl|cribi|Naga_100892g2.34 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:179829..182723 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3349 ID=rna3349|Name=rna3349|organism=Nannochloropsis gaditana|type=mRNA|length=1588bp
GCGCTCTCCTCAAATGTCTTTCACGCCATGCTTCCTGCTTGGTTGACCGC
TCCCCCTGCCCGTGTACCCCCCTATCTGCCAAAGTGGCTGACAGGCCAAG
TCCATGTTTACCCTGCAAAGGTTGTCAGGCCTTTCATTTAAAAATGTACA
GAGTCAGTTTTCCTTGTCGTGCCTTCATGCAAGGGAAGTCGGGCCCAATA
TATCTCTTTCGGCAAGATGATGCCAGGTTGCACCTTCGTCTTCCTCGAAG
CTCCCGCTTATGCTTCAAAGTCTCGACTTTCACAGGGTAATTAGATCCAG
GAAGGCGCAAGCAAAGCTTGGTGCCCAAGGGGCTGTGAGGCGATTTTTCT
GACTCGAGATCGTTGCCATTGCGCAATCGGAGCATAGTTTCTCACGCCCC
GGTCGTGCATTCTTTTATTGTGGAAGTATCATGCCCCGTCGCACTGGGAA
ACGCAGCCTCGTGGCTGGAGCCGATGGAGACTCCAACACCTGCAGCTCCA
CGGCCCGCCTGCAACGAATGATCCAAGACGGAGAGACCTACGAAGCCTTA
CAGACAGCCAGAGCTCTCTTTGCCCGCTTGGACGGTGCCCCTGTCTCTGC
CGCCAACCCCGGGAGGAAAAAAGGCGCCGAGGCACGCGTCATGGTCTTAC
ACGTGGCTCGTACACTCGCAGAGGTGGGCGAGTACCAGTCGGTGCTAGAC
TTGGCGCGGTTGTACATGGCCAACAATGCCTCCCTGAGGAAACAGGCCAT
GCCGACGGGGCACACCGTTCCCCAAGTGGAAGAAATGAGCGCGGAGGAAG
CAGGAACCTGGTCCCCGTCGGGAGATACCAAGGAAGCGGTGGAAGAAGGA
GGGGAGGGAGACGACCCTGCCTGGGAGGCCCACCGATTCCACACGGGGGG
TCGAACGGCCATGCTTTCCTTGGCCCGCCTGCTCCCGCCCGCATCGAAGG
AACGCGTGGCCTTGCTCAAGGGGTTGACCCGGTGGGCCGCCGAGGAGGAG
GAGGCGGAGGAGGGAGGGAAGGAAGTCTTGGAGCTGGGCTTGGAGTTGGC
CAAGGCGTACAGTGCGAGGGGCGAGTGGGCTCGGGCGGCCCAACAACACG
GGGAGCTGGCTCGGCAGTGCACAGGGCCGGATGCGGATACCTTGGCGGCG
TCGTATGTGCAGGTGCTGGAAGCTTGGAGCGCGGAAGGCTATGCGGGTGA
GAAGGATTTGTTCCTCGCCCGTGCGGTTTTGCACGGATTGGGCACCTCTT
CCTATGCCGTCTTGGGGGCCCTCCCCTTTGCCCGGGCTTTGATGACGGCG
GCCCAAGCCTCCTCGGCCTTTGCGCCCTGCTTGGAGACGAGTCCCTTGCT
GCATTACGTGGGCCTGGTGGTGGCTTTGTTGGGAGCGCGGGCCGGGGAGG
GAGGGAGGGAGGGAGGGAGGGAGGGAGGGAAGGAGGGCGAGGTCTTTCAA
CTCCTGTCCTCCCGGTACCAGCCCGCGCTGCGCCGGGACCCGGCGCTGGA
AAAATTGGTGGGCCGCATCGGGGAGGGAGGCTTTGGTCTGTCCCCTGCCT
CTAATCCGATGCAAGCCTTCCTGTCGAGCATGCTAGGC back to topprotein sequence of rna3349 >rna3349-protein ID=rna3349-protein|Name=rna3349|organism=Nannochloropsis gaditana|type=polypeptide|length=902bp
MHLPSAKLPPPFPPPPHFYRFLLLVLVFPWTDAFLGFRPRLFDLISLSHG
AFTSPQPRLSLRRRSCRYSTGRTSGSTGIPFSLQELGVASIRFNRADFPP
TPDTLFPASVDYLLTLPATIGGVPFEFTLDTTASVNLVTKEVVEASLGTS
PKASGKKGFGNEAKGAGGGNGGGGGFGGKQDASSPGKGKKGEKKKKKKKE
DKEWEDAGGSLMEAEGVAFEMTVSSSPPGLLVPVKAVVSEEWTGVGGGCL
GLPFLRSFGAVEIDWRRMQGRLWGGRDGPQVVDGLDNWRESEEGGKGQEG
AEWKIDFAPLRIKMNAQMALEALGQGEEEEDKNEEGTCPEVWVVDVHLDG
SEAGIPAIVDLGCQASILNWKAAEALGYRKPTSPGTAGAVEVQAVEGIEV
AFADKTSLSLGEPHGVRVPARPLAIADLPVFAYAGLEQVPAMVLGLDVLG
SVQDTLVLDWSQRCLTVGGPLLPVKRNLAAVDMPLIRREQAVERAPAGGQ
AYQYGVPAVLGGTEKEVVLMVDTAAGCMAVSQKAWEAYADAQGGREGGPA
EGQVVDMAGIGPGKGLKARRQSVTMHLGGSSVREGYELTTEVAVLEGGRE
GGKDRFDGFLGQSFFGAYAVVDFDWRHAMLRCYSEEKTEGEKATTLDGLL
DFWPPSPQPTSPPPSASPPPSPPQAARLHTGVARDRLGPNALMSVTVVVN
GRKDVPCCGLIDTGVFTSVLNWAAARALGVGKEGEIGVTVPARESGMVVV
GLDGAPTEVTLARFDEVAFEGEAEGGREGGAVVVPTENGGVTLAVADLLG
LQQLGLLETPAMVVGLDLLEGGRGGRLILDLGREGSSWRRKRGRGEGEGL
KFCHLKVPKKMNGHERASDGWTGGGRRGGRHALPDRGWQERRTSSNLSSP
LS back to topmRNA from alignment at CM002461.1:179829..182723- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna3349 ID=rna3349|Name=rna3349|organism=Nannochloropsis gaditana|type=mRNA|length=2895bp|location=Sequence derived from alignment at CM002461.1:179829..182723- (Nannochloropsis gaditana)
CACAGTCGTTGACTTGAACACTCTTAAGGGCGACCTACATGCACCTTCCA
TCCGCAAAATTGCCACCACCTTTTCCTCCACCACCACATTTTTACCGCTT
CCTTCTACTCGTCCTGGTATTCCCTTGGACGGATGCTTTTCTCGGCTTCC
GTCCGCGTCTTTTCGACTTGATTTCTCTGTCACATGGCGCGTTTACCTCC
CCTCAACCCCGCCTGTCGCTGCGCAGGCGATCCTGTCGATACAGCACCGG
CAGAACCAGTGGCAGTACTGGCATACCCTTTTCCCTTCAAGAATTGGGCG
TGGCAAGCATAAGATTCAATCGGGCAGATTTCCCGCCCACCCCCGACACA
CTTTTCCCAGCCTCCGTAGATTACCTCCTCACCTTGCCGGCAACAATTGG
AGGCGTCCCCTTTGAATTCACCCTTGACACAACCGCGTCCGTCAATTTGG
TCACCAAAGAAGTAGTCGAAGCCTCTTTGGGAACATCGCCGAAGGCATCG
GGGAAAAAGGGCTTCGGAAATGAGGCTAAAGGTGCAGGGGGGGGGAATGG
AGGAGGAGGAGGCTTCGGTGGGAAGCAGGATGCTTCATCTCCCGGGAAGG
GGAAGAAAGGAGAGAAGAAAAAGAAAAAAAAGAAGGAGGACAAGGAGTGG
GAGGATGCGGGCGGGTCTTTGATGGAGGCGGAAGGTGTGGCCTTCGAAAT
GACAGTGTCGTCCTCCCCCCCCGGGCTTCTGGTACCGGTCAAGGCAGTAG
TCTCCGAGGAATGGACGGGGGTGGGTGGAGGTTGTCTGGGGCTGCCTTTC
CTCCGTTCCTTTGGCGCGGTGGAGATCGACTGGAGGCGCATGCAAGGGAG
GCTGTGGGGGGGGAGGGACGGGCCCCAGGTCGTGGACGGCCTGGACAATT
GGCGGGAGAGCGAGGAAGGAGGAAAGGGGCAGGAAGGCGCGGAATGGAAA
ATAGATTTCGCGCCCTTGAGGATCAAAATGAATGCCCAAATGGCATTGGA
GGCGTTGGGGCAAGGCGAGGAGGAGGAGGATAAGAACGAGGAGGGCACCT
GCCCCGAAGTCTGGGTCGTGGATGTGCATTTGGATGGGAGCGAGGCTGGC
ATCCCGGCCATCGTGGATTTAGGCTGTCAAGCCAGCATCCTGAATTGGAA
AGCCGCCGAGGCGTTGGGGTACCGAAAGCCAACCTCGCCAGGAACGGCGG
GGGCGGTCGAGGTCCAGGCGGTGGAAGGTATCGAGGTGGCCTTTGCGGAC
AAGACCAGCCTCTCCCTCGGGGAGCCCCACGGGGTCCGCGTCCCCGCCCG
CCCGTTGGCGATTGCCGACCTTCCCGTCTTTGCCTACGCGGGCCTGGAGC
AGGTACCGGCCATGGTCCTGGGGCTCGACGTCTTGGGGAGTGTCCAGGAC
ACATTGGTCTTGGATTGGTCGCAGCGATGCCTGACCGTGGGAGGACCCCT
CTTGCCCGTCAAACGCAACCTGGCCGCGGTGGATATGCCGTTGATCAGGC
GAGAACAGGCGGTGGAAAGGGCGCCGGCGGGCGGTCAGGCTTACCAATAC
GGGGTGCCGGCCGTTCTGGGCGGGACGGAGAAGGAGGTGGTGTTGATGGT
GGACACTGCGGCGGGGTGCATGGCTGTGTCCCAGAAAGCTTGGGAGGCGT
ATGCCGACGCGCAGGGAGGGCGGGAGGGAGGGCCGGCGGAAGGACAGGTG
GTCGATATGGCAGGGATCGGGCCCGGGAAGGGTCTGAAGGCGAGGCGGCA
GAGCGTGACGATGCATCTGGGCGGGTCGAGTGTCCGGGAAGGTTATGAGT
TGACCACGGAGGTGGCAGTGCTGGAGGGAGGGAGGGAGGGAGGGAAGGAC
CGGTTTGACGGCTTTTTGGGCCAATCCTTCTTCGGCGCGTATGCGGTGGT
GGACTTCGATTGGAGGCATGCCATGCTTCGGTGTTATTCGGAGGAGAAAA
CAGAAGGGGAGAAGGCAACGACGCTGGATGGATTGCTCGATTTTTGGCCC
CCCTCCCCCCAGCCTACCTCCCCGCCGCCCTCCGCTTCCCCGCCGCCGAG
CCCTCCCCAAGCGGCCCGCTTGCACACGGGGGTGGCGCGCGACCGGCTCG
GTCCCAACGCGTTGATGAGCGTGACGGTGGTGGTGAACGGGCGGAAAGAC
GTTCCCTGCTGTGGCCTCATCGATACAGGGGTCTTCACAAGCGTCTTGAA
CTGGGCCGCAGCCCGTGCCTTGGGGGTGGGAAAAGAAGGGGAAATAGGAG
TCACGGTCCCGGCCAGGGAGTCGGGCATGGTCGTGGTGGGACTGGATGGT
GCTCCTACGGAAGTCACGCTCGCCCGCTTTGACGAGGTGGCGTTCGAGGG
CGAGGCCGAAGGCGGGAGGGAGGGAGGGGCGGTGGTAGTGCCTACGGAAA
ACGGGGGCGTGACGTTGGCGGTGGCTGATTTGCTGGGTTTGCAACAGTTG
GGACTTCTAGAGACGCCGGCGATGGTGGTGGGCTTGGACCTGCTGGAGGG
AGGGAGGGGAGGGAGGCTGATCCTGGATCTGGGGAGGGAAGGCTCTTCAT
GGCGTAGGAAGAGAGGGAGGGGCGAGGGGGAAGGGTTGAAATTTTGCCAT
TTAAAAGTACCAAAAAAAATGAATGGTCATGAAAGGGCAAGTGATGGATG
GACGGGCGGTGGACGAAGGGGGGGGAGGCACGCTCTCCCAGACAGGGGGT
GGCAAGAACGGAGGACTTCGAGCAATCTTTCCTCCCCTCTGTCATAAGAC
AACAGAGACGAAATCGAGAAATGCTGCCCTTCGAAAATGATAAGACAAGG
GAGAGGGAATCGAGGGACGTGTTTCCCCCAAAGTAACGCGACCCCTGGCA
AGCGCGCTATTCTGTCTACACATCAAGAAACATCCATCACTCGCT back to topCoding sequence (CDS) from alignment at CM002461.1:179829..182723- >rna3349 ID=rna3349|Name=rna3349|organism=Nannochloropsis gaditana|type=CDS|length=2709bp|location=Sequence derived from alignment at CM002461.1:179829..182723- (Nannochloropsis gaditana)
ATGCACCTTCCATCCGCAAAATTGCCACCACCTTTTCCTCCACCACCACA
TTTTTACCGCTTCCTTCTACTCGTCCTGGTATTCCCTTGGACGGATGCTT
TTCTCGGCTTCCGTCCGCGTCTTTTCGACTTGATTTCTCTGTCACATGGC
GCGTTTACCTCCCCTCAACCCCGCCTGTCGCTGCGCAGGCGATCCTGTCG
ATACAGCACCGGCAGAACCAGTGGCAGTACTGGCATACCCTTTTCCCTTC
AAGAATTGGGCGTGGCAAGCATAAGATTCAATCGGGCAGATTTCCCGCCC
ACCCCCGACACACTTTTCCCAGCCTCCGTAGATTACCTCCTCACCTTGCC
GGCAACAATTGGAGGCGTCCCCTTTGAATTCACCCTTGACACAACCGCGT
CCGTCAATTTGGTCACCAAAGAAGTAGTCGAAGCCTCTTTGGGAACATCG
CCGAAGGCATCGGGGAAAAAGGGCTTCGGAAATGAGGCTAAAGGTGCAGG
GGGGGGGAATGGAGGAGGAGGAGGCTTCGGTGGGAAGCAGGATGCTTCAT
CTCCCGGGAAGGGGAAGAAAGGAGAGAAGAAAAAGAAAAAAAAGAAGGAG
GACAAGGAGTGGGAGGATGCGGGCGGGTCTTTGATGGAGGCGGAAGGTGT
GGCCTTCGAAATGACAGTGTCGTCCTCCCCCCCCGGGCTTCTGGTACCGG
TCAAGGCAGTAGTCTCCGAGGAATGGACGGGGGTGGGTGGAGGTTGTCTG
GGGCTGCCTTTCCTCCGTTCCTTTGGCGCGGTGGAGATCGACTGGAGGCG
CATGCAAGGGAGGCTGTGGGGGGGGAGGGACGGGCCCCAGGTCGTGGACG
GCCTGGACAATTGGCGGGAGAGCGAGGAAGGAGGAAAGGGGCAGGAAGGC
GCGGAATGGAAAATAGATTTCGCGCCCTTGAGGATCAAAATGAATGCCCA
AATGGCATTGGAGGCGTTGGGGCAAGGCGAGGAGGAGGAGGATAAGAACG
AGGAGGGCACCTGCCCCGAAGTCTGGGTCGTGGATGTGCATTTGGATGGG
AGCGAGGCTGGCATCCCGGCCATCGTGGATTTAGGCTGTCAAGCCAGCAT
CCTGAATTGGAAAGCCGCCGAGGCGTTGGGGTACCGAAAGCCAACCTCGC
CAGGAACGGCGGGGGCGGTCGAGGTCCAGGCGGTGGAAGGTATCGAGGTG
GCCTTTGCGGACAAGACCAGCCTCTCCCTCGGGGAGCCCCACGGGGTCCG
CGTCCCCGCCCGCCCGTTGGCGATTGCCGACCTTCCCGTCTTTGCCTACG
CGGGCCTGGAGCAGGTACCGGCCATGGTCCTGGGGCTCGACGTCTTGGGG
AGTGTCCAGGACACATTGGTCTTGGATTGGTCGCAGCGATGCCTGACCGT
GGGAGGACCCCTCTTGCCCGTCAAACGCAACCTGGCCGCGGTGGATATGC
CGTTGATCAGGCGAGAACAGGCGGTGGAAAGGGCGCCGGCGGGCGGTCAG
GCTTACCAATACGGGGTGCCGGCCGTTCTGGGCGGGACGGAGAAGGAGGT
GGTGTTGATGGTGGACACTGCGGCGGGGTGCATGGCTGTGTCCCAGAAAG
CTTGGGAGGCGTATGCCGACGCGCAGGGAGGGCGGGAGGGAGGGCCGGCG
GAAGGACAGGTGGTCGATATGGCAGGGATCGGGCCCGGGAAGGGTCTGAA
GGCGAGGCGGCAGAGCGTGACGATGCATCTGGGCGGGTCGAGTGTCCGGG
AAGGTTATGAGTTGACCACGGAGGTGGCAGTGCTGGAGGGAGGGAGGGAG
GGAGGGAAGGACCGGTTTGACGGCTTTTTGGGCCAATCCTTCTTCGGCGC
GTATGCGGTGGTGGACTTCGATTGGAGGCATGCCATGCTTCGGTGTTATT
CGGAGGAGAAAACAGAAGGGGAGAAGGCAACGACGCTGGATGGATTGCTC
GATTTTTGGCCCCCCTCCCCCCAGCCTACCTCCCCGCCGCCCTCCGCTTC
CCCGCCGCCGAGCCCTCCCCAAGCGGCCCGCTTGCACACGGGGGTGGCGC
GCGACCGGCTCGGTCCCAACGCGTTGATGAGCGTGACGGTGGTGGTGAAC
GGGCGGAAAGACGTTCCCTGCTGTGGCCTCATCGATACAGGGGTCTTCAC
AAGCGTCTTGAACTGGGCCGCAGCCCGTGCCTTGGGGGTGGGAAAAGAAG
GGGAAATAGGAGTCACGGTCCCGGCCAGGGAGTCGGGCATGGTCGTGGTG
GGACTGGATGGTGCTCCTACGGAAGTCACGCTCGCCCGCTTTGACGAGGT
GGCGTTCGAGGGCGAGGCCGAAGGCGGGAGGGAGGGAGGGGCGGTGGTAG
TGCCTACGGAAAACGGGGGCGTGACGTTGGCGGTGGCTGATTTGCTGGGT
TTGCAACAGTTGGGACTTCTAGAGACGCCGGCGATGGTGGTGGGCTTGGA
CCTGCTGGAGGGAGGGAGGGGAGGGAGGCTGATCCTGGATCTGGGGAGGG
AAGGCTCTTCATGGCGTAGGAAGAGAGGGAGGGGCGAGGGGGAAGGGTTG
AAATTTTGCCATTTAAAAGTACCAAAAAAAATGAATGGTCATGAAAGGGC
AAGTGATGGATGGACGGGCGGTGGACGAAGGGGGGGGAGGCACGCTCTCC
CAGACAGGGGGTGGCAAGAACGGAGGACTTCGAGCAATCTTTCCTCCCCT
CTGTCATAA back to top
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