EWM27333.1, cds3340 (CDS) Nannochloropsis gaditana

Overview
NameEWM27333.1
Unique Namecds3340
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:179977..182685 -

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Properties
Property NameValue
Protein idEWM27333.1
ProductPeptidase aspartic
Orig transcript idgnl|cribi|Naga_100892g2.34.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:179977..182685 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM27333.1 vs. NCBI_GenBank
Match: gi|585109536|gb|EWM27333.1| (Peptidase aspartic [Nannochloropsis gaditana])

HSP 1 Score: 1799.64 bits (4660), Expect = 0.000e+0
Identity = 902/902 (100.00%), Postives = 902/902 (100.00%), Query Frame = 0
Query:    1 MHLPSAKLPPPFPPPPHFYRFLLLVLVFPWTDAFLGFRPRLFDLISLSHGAFTSPQPRLSLRRRSCRYSTGRTSGSTGIPFSLQELGVASIRFNRADFPPTPDTLFPASVDYLLTLPATIGGVPFEFTLDTTASVNLVTKEVVEASLGTSPKASGKKGFGNEAKGAGGGNGGGGGFGGKQDASSPGKGKKGEKKKKKKKEDKEWEDAGGSLMEAEGVAFEMTVSSSPPGLLVPVKAVVSEEWTGVGGGCLGLPFLRSFGAVEIDWRRMQGRLWGGRDGPQVVDGLDNWRESEEGGKGQEGAEWKIDFAPLRIKMNAQMALEALGQGEEEEDKNEEGTCPEVWVVDVHLDGSEAGIPAIVDLGCQASILNWKAAEALGYRKPTSPGTAGAVEVQAVEGIEVAFADKTSLSLGEPHGVRVPARPLAIADLPVFAYAGLEQVPAMVLGLDVLGSVQDTLVLDWSQRCLTVGGPLLPVKRNLAAVDMPLIRREQAVERAPAGGQAYQYGVPAVLGGTEKEVVLMVDTAAGCMAVSQKAWEAYADAQGGREGGPAEGQVVDMAGIGPGKGLKARRQSVTMHLGGSSVREGYELTTEVAVLEGGREGGKDRFDGFLGQSFFGAYAVVDFDWRHAMLRCYSEEKTEGEKATTLDGLLDFWPPSPQPTSPPPSASPPPSPPQAARLHTGVARDRLGPNALMSVTVVVNGRKDVPCCGLIDTGVFTSVLNWAAARALGVGKEGEIGVTVPARESGMVVVGLDGAPTEVTLARFDEVAFEGEAEGGREGGAVVVPTENGGVTLAVADLLGLQQLGLLETPAMVVGLDLLEGGRGGRLILDLGREGSSWRRKRGRGEGEGLKFCHLKVPKKMNGHERASDGWTGGGRRGGRHALPDRGWQERRTSSNLSSPLS 902
            MHLPSAKLPPPFPPPPHFYRFLLLVLVFPWTDAFLGFRPRLFDLISLSHGAFTSPQPRLSLRRRSCRYSTGRTSGSTGIPFSLQELGVASIRFNRADFPPTPDTLFPASVDYLLTLPATIGGVPFEFTLDTTASVNLVTKEVVEASLGTSPKASGKKGFGNEAKGAGGGNGGGGGFGGKQDASSPGKGKKGEKKKKKKKEDKEWEDAGGSLMEAEGVAFEMTVSSSPPGLLVPVKAVVSEEWTGVGGGCLGLPFLRSFGAVEIDWRRMQGRLWGGRDGPQVVDGLDNWRESEEGGKGQEGAEWKIDFAPLRIKMNAQMALEALGQGEEEEDKNEEGTCPEVWVVDVHLDGSEAGIPAIVDLGCQASILNWKAAEALGYRKPTSPGTAGAVEVQAVEGIEVAFADKTSLSLGEPHGVRVPARPLAIADLPVFAYAGLEQVPAMVLGLDVLGSVQDTLVLDWSQRCLTVGGPLLPVKRNLAAVDMPLIRREQAVERAPAGGQAYQYGVPAVLGGTEKEVVLMVDTAAGCMAVSQKAWEAYADAQGGREGGPAEGQVVDMAGIGPGKGLKARRQSVTMHLGGSSVREGYELTTEVAVLEGGREGGKDRFDGFLGQSFFGAYAVVDFDWRHAMLRCYSEEKTEGEKATTLDGLLDFWPPSPQPTSPPPSASPPPSPPQAARLHTGVARDRLGPNALMSVTVVVNGRKDVPCCGLIDTGVFTSVLNWAAARALGVGKEGEIGVTVPARESGMVVVGLDGAPTEVTLARFDEVAFEGEAEGGREGGAVVVPTENGGVTLAVADLLGLQQLGLLETPAMVVGLDLLEGGRGGRLILDLGREGSSWRRKRGRGEGEGLKFCHLKVPKKMNGHERASDGWTGGGRRGGRHALPDRGWQERRTSSNLSSPLS
Sbjct:    1 MHLPSAKLPPPFPPPPHFYRFLLLVLVFPWTDAFLGFRPRLFDLISLSHGAFTSPQPRLSLRRRSCRYSTGRTSGSTGIPFSLQELGVASIRFNRADFPPTPDTLFPASVDYLLTLPATIGGVPFEFTLDTTASVNLVTKEVVEASLGTSPKASGKKGFGNEAKGAGGGNGGGGGFGGKQDASSPGKGKKGEKKKKKKKEDKEWEDAGGSLMEAEGVAFEMTVSSSPPGLLVPVKAVVSEEWTGVGGGCLGLPFLRSFGAVEIDWRRMQGRLWGGRDGPQVVDGLDNWRESEEGGKGQEGAEWKIDFAPLRIKMNAQMALEALGQGEEEEDKNEEGTCPEVWVVDVHLDGSEAGIPAIVDLGCQASILNWKAAEALGYRKPTSPGTAGAVEVQAVEGIEVAFADKTSLSLGEPHGVRVPARPLAIADLPVFAYAGLEQVPAMVLGLDVLGSVQDTLVLDWSQRCLTVGGPLLPVKRNLAAVDMPLIRREQAVERAPAGGQAYQYGVPAVLGGTEKEVVLMVDTAAGCMAVSQKAWEAYADAQGGREGGPAEGQVVDMAGIGPGKGLKARRQSVTMHLGGSSVREGYELTTEVAVLEGGREGGKDRFDGFLGQSFFGAYAVVDFDWRHAMLRCYSEEKTEGEKATTLDGLLDFWPPSPQPTSPPPSASPPPSPPQAARLHTGVARDRLGPNALMSVTVVVNGRKDVPCCGLIDTGVFTSVLNWAAARALGVGKEGEIGVTVPARESGMVVVGLDGAPTEVTLARFDEVAFEGEAEGGREGGAVVVPTENGGVTLAVADLLGLQQLGLLETPAMVVGLDLLEGGRGGRLILDLGREGSSWRRKRGRGEGEGLKFCHLKVPKKMNGHERASDGWTGGGRRGGRHALPDRGWQERRTSSNLSSPLS 902          
BLAST of EWM27333.1 vs. NCBI_GenBank
Match: gi|159467897|ref|XP_001692128.1| (hypothetical protein CHLREDRAFT_170883 [Chlamydomonas reinhardtii] >gi|158278855|gb|EDP04618.1| predicted protein [Chlamydomonas reinhardtii])

HSP 1 Score: 63.5438 bits (153), Expect = 8.222e-7
Identity = 51/131 (38.93%), Postives = 68/131 (51.91%), Query Frame = 0
Query:  344 VDVHLDGSEAGIPAIVDLGCQASILNWKAAEALGYRKPTSPGTAGAVEVQAVEGIEVAFADKT-----SLSLGEPHGVRVPARPLA--IADLPVFAYAGLEQVPAMVLGLDVLGSVQDTLVLDW-SQRCLT 466
            V V L+GS A  PAI+DLG   SILNW AAE  G R+      A +   + V  I+   +++       + LG      VP+R LA  + D+P FA  G  + P MVLG D+L +  D LVLD  +QR   
Sbjct:  264 VPVSLNGS-ARFPAILDLGANFSILNWPAAELAGVRRGADGAPADSSMQEQVTSIDGQRSNRIRRGYLDVVLGGEDTSYVPSRSLALMVRDIPSFAVLGFGESPVMVLGYDLLSA--DRLVLDLRNQRIFI 391          
The following BLAST results are available for this feature:
BLAST of EWM27333.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585109536|gb|EWM27333.1|0.000e+0100.00Peptidase aspartic [Nannochloropsis gaditana][more]
gi|159467897|ref|XP_001692128.1|8.222e-738.93hypothetical protein CHLREDRAFT_170883 [Chlamydomo... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3349rna3349Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications