EWM27333.1, cds3340 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM27333.1 vs. NCBI_GenBank
Match: gi|585109536|gb|EWM27333.1| (Peptidase aspartic [Nannochloropsis gaditana]) HSP 1 Score: 1799.64 bits (4660), Expect = 0.000e+0 Identity = 902/902 (100.00%), Postives = 902/902 (100.00%), Query Frame = 0
Query: 1 MHLPSAKLPPPFPPPPHFYRFLLLVLVFPWTDAFLGFRPRLFDLISLSHGAFTSPQPRLSLRRRSCRYSTGRTSGSTGIPFSLQELGVASIRFNRADFPPTPDTLFPASVDYLLTLPATIGGVPFEFTLDTTASVNLVTKEVVEASLGTSPKASGKKGFGNEAKGAGGGNGGGGGFGGKQDASSPGKGKKGEKKKKKKKEDKEWEDAGGSLMEAEGVAFEMTVSSSPPGLLVPVKAVVSEEWTGVGGGCLGLPFLRSFGAVEIDWRRMQGRLWGGRDGPQVVDGLDNWRESEEGGKGQEGAEWKIDFAPLRIKMNAQMALEALGQGEEEEDKNEEGTCPEVWVVDVHLDGSEAGIPAIVDLGCQASILNWKAAEALGYRKPTSPGTAGAVEVQAVEGIEVAFADKTSLSLGEPHGVRVPARPLAIADLPVFAYAGLEQVPAMVLGLDVLGSVQDTLVLDWSQRCLTVGGPLLPVKRNLAAVDMPLIRREQAVERAPAGGQAYQYGVPAVLGGTEKEVVLMVDTAAGCMAVSQKAWEAYADAQGGREGGPAEGQVVDMAGIGPGKGLKARRQSVTMHLGGSSVREGYELTTEVAVLEGGREGGKDRFDGFLGQSFFGAYAVVDFDWRHAMLRCYSEEKTEGEKATTLDGLLDFWPPSPQPTSPPPSASPPPSPPQAARLHTGVARDRLGPNALMSVTVVVNGRKDVPCCGLIDTGVFTSVLNWAAARALGVGKEGEIGVTVPARESGMVVVGLDGAPTEVTLARFDEVAFEGEAEGGREGGAVVVPTENGGVTLAVADLLGLQQLGLLETPAMVVGLDLLEGGRGGRLILDLGREGSSWRRKRGRGEGEGLKFCHLKVPKKMNGHERASDGWTGGGRRGGRHALPDRGWQERRTSSNLSSPLS 902
MHLPSAKLPPPFPPPPHFYRFLLLVLVFPWTDAFLGFRPRLFDLISLSHGAFTSPQPRLSLRRRSCRYSTGRTSGSTGIPFSLQELGVASIRFNRADFPPTPDTLFPASVDYLLTLPATIGGVPFEFTLDTTASVNLVTKEVVEASLGTSPKASGKKGFGNEAKGAGGGNGGGGGFGGKQDASSPGKGKKGEKKKKKKKEDKEWEDAGGSLMEAEGVAFEMTVSSSPPGLLVPVKAVVSEEWTGVGGGCLGLPFLRSFGAVEIDWRRMQGRLWGGRDGPQVVDGLDNWRESEEGGKGQEGAEWKIDFAPLRIKMNAQMALEALGQGEEEEDKNEEGTCPEVWVVDVHLDGSEAGIPAIVDLGCQASILNWKAAEALGYRKPTSPGTAGAVEVQAVEGIEVAFADKTSLSLGEPHGVRVPARPLAIADLPVFAYAGLEQVPAMVLGLDVLGSVQDTLVLDWSQRCLTVGGPLLPVKRNLAAVDMPLIRREQAVERAPAGGQAYQYGVPAVLGGTEKEVVLMVDTAAGCMAVSQKAWEAYADAQGGREGGPAEGQVVDMAGIGPGKGLKARRQSVTMHLGGSSVREGYELTTEVAVLEGGREGGKDRFDGFLGQSFFGAYAVVDFDWRHAMLRCYSEEKTEGEKATTLDGLLDFWPPSPQPTSPPPSASPPPSPPQAARLHTGVARDRLGPNALMSVTVVVNGRKDVPCCGLIDTGVFTSVLNWAAARALGVGKEGEIGVTVPARESGMVVVGLDGAPTEVTLARFDEVAFEGEAEGGREGGAVVVPTENGGVTLAVADLLGLQQLGLLETPAMVVGLDLLEGGRGGRLILDLGREGSSWRRKRGRGEGEGLKFCHLKVPKKMNGHERASDGWTGGGRRGGRHALPDRGWQERRTSSNLSSPLS
Sbjct: 1 MHLPSAKLPPPFPPPPHFYRFLLLVLVFPWTDAFLGFRPRLFDLISLSHGAFTSPQPRLSLRRRSCRYSTGRTSGSTGIPFSLQELGVASIRFNRADFPPTPDTLFPASVDYLLTLPATIGGVPFEFTLDTTASVNLVTKEVVEASLGTSPKASGKKGFGNEAKGAGGGNGGGGGFGGKQDASSPGKGKKGEKKKKKKKEDKEWEDAGGSLMEAEGVAFEMTVSSSPPGLLVPVKAVVSEEWTGVGGGCLGLPFLRSFGAVEIDWRRMQGRLWGGRDGPQVVDGLDNWRESEEGGKGQEGAEWKIDFAPLRIKMNAQMALEALGQGEEEEDKNEEGTCPEVWVVDVHLDGSEAGIPAIVDLGCQASILNWKAAEALGYRKPTSPGTAGAVEVQAVEGIEVAFADKTSLSLGEPHGVRVPARPLAIADLPVFAYAGLEQVPAMVLGLDVLGSVQDTLVLDWSQRCLTVGGPLLPVKRNLAAVDMPLIRREQAVERAPAGGQAYQYGVPAVLGGTEKEVVLMVDTAAGCMAVSQKAWEAYADAQGGREGGPAEGQVVDMAGIGPGKGLKARRQSVTMHLGGSSVREGYELTTEVAVLEGGREGGKDRFDGFLGQSFFGAYAVVDFDWRHAMLRCYSEEKTEGEKATTLDGLLDFWPPSPQPTSPPPSASPPPSPPQAARLHTGVARDRLGPNALMSVTVVVNGRKDVPCCGLIDTGVFTSVLNWAAARALGVGKEGEIGVTVPARESGMVVVGLDGAPTEVTLARFDEVAFEGEAEGGREGGAVVVPTENGGVTLAVADLLGLQQLGLLETPAMVVGLDLLEGGRGGRLILDLGREGSSWRRKRGRGEGEGLKFCHLKVPKKMNGHERASDGWTGGGRRGGRHALPDRGWQERRTSSNLSSPLS 902
BLAST of EWM27333.1 vs. NCBI_GenBank
Match: gi|159467897|ref|XP_001692128.1| (hypothetical protein CHLREDRAFT_170883 [Chlamydomonas reinhardtii] >gi|158278855|gb|EDP04618.1| predicted protein [Chlamydomonas reinhardtii]) HSP 1 Score: 63.5438 bits (153), Expect = 8.222e-7 Identity = 51/131 (38.93%), Postives = 68/131 (51.91%), Query Frame = 0
Query: 344 VDVHLDGSEAGIPAIVDLGCQASILNWKAAEALGYRKPTSPGTAGAVEVQAVEGIEVAFADKT-----SLSLGEPHGVRVPARPLA--IADLPVFAYAGLEQVPAMVLGLDVLGSVQDTLVLDW-SQRCLT 466
V V L+GS A PAI+DLG SILNW AAE G R+ A + + V I+ +++ + LG VP+R LA + D+P FA G + P MVLG D+L + D LVLD +QR
Sbjct: 264 VPVSLNGS-ARFPAILDLGANFSILNWPAAELAGVRRGADGAPADSSMQEQVTSIDGQRSNRIRRGYLDVVLGGEDTSYVPSRSLALMVRDIPSFAVLGFGESPVMVLGYDLLSA--DRLVLDLRNQRIFI 391 The following BLAST results are available for this feature:
BLAST of EWM27333.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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