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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100226g11.10116.mrna |
| Orig protein id | gnl|cribi|Naga_100226g11.10116 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:162867..164539 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3342 ID=rna3342|Name=rna3342|organism=Nannochloropsis gaditana|type=mRNA|length=1059bp
ATGCGTTTGATCCCACGATATATAAACATGCACGCAGGCGACAAACAAGA
GCGGGACACTACTCCAATCGGTTGGCAACACCCGGCCACTGAAGAGGAGG
GGACACTCGACAGACCATCCTCTCCCGTGGCGATTTCCGGCTTCTACCTC
TTCACCCTCGAACTGCTCACGATTGCCCTGGTCTTCTCGAAGGCCCTCCA
CCACAACGCTGGGAAGAAGTATGTCCGCGTCGTTCAGCCCGGGTGCCACG
TGGCATGGGCCGACATGAATGGAGACCACTCCACCGTTGCCTGCTGCTCC
CTGCCCTCCTCCTCCACCACCTTCCTCTCCTTTCTTCTCGGTGGAGACGA
CCCGCCCTCCGAGGGTCAGGACGGATGGAAGAACCCCCTGTGCGCAGCTG
CGACGTCACCTCGGACGAAGCATCTGACCAGTGGCCTGGCGCTGGTCCTT
CCCTTTGTGACCTGGTTCCTGAATTGTTTGTTCTCCGCTGTGGCTGGCTG
GTGGGGCGAGGGGGGCCGGACGGAGAAGGGAAGGGGGAAGGACGAGGAGG
GGAAGGAGGGGAGGAGGAGGAGGGAGGCGATTTGGACGGGCCAGCGAAGA
CGATTGGGGCTGTATGCGGCGGTGATCATGTTTCGAACAGCAGTGCTCCT
GATGCTCCTCAACCGTGTGCAGGCATGGGTGCAAGCGGAGGAAGGCGATA
CCTGTTGGTACTCGGCTCTCCGACACGACGGCAGGTGCAGAGAGCGCTTC
GATTTCGCCGACCACGGCGTGCTCTTCATCTCCCAGTACCTGGCTATCCA
AACGTTTGAGACGGTGGCGATCCTGCGGGAGGCCCGGAGCCTCCTCCACC
TCGTCACCTGCCTGGCCTCGGCATGCCTGATCTCCCTCCTCTCCCTGGTC
GGCTTCTATGACACGGTCACCTACTTCCATACCCGGACGGAGAGCCTCAT
GGGCGTCCTCATCTCCCTCGTCACCGTCCAGCTCCCTCTTATGCTCGTTG
CCTCGGGCCGCCTGCGCCAGCATCGTTATTTGCGTATCAGTCATTTCATC
AAAGCTTGA back to topprotein sequence of rna3342 >rna3342-protein ID=rna3342-protein|Name=rna3342|organism=Nannochloropsis gaditana|type=polypeptide|length=464bp
MAALFLVDADIAWLKCGIKSGWNLVVPTEGIEGGKGLVPEDMDTRARRMR
NLDECSSKRHAPGNTACCVTQPASLLLTRLNDDLLARVLSFTAQWHVIRS
ISGSTRTFSDLLVRSLAIKPHTPLHVLHRVMTRVGENVLVLDLTGNRHLN
DASLRHILEETCPRLHHLVLNYCRQLTPAVVPILSRVPRVAVRGCWRLLT
PSPSLSSDVVLELQLLALQQNDRHRHDGVAKYFEFASSANRLVGPGQDGE
EEGGEEEGEDTKGGGSSAEGRGSISRPGMSTGGALNNRRCVPGTGAVVEE
GRESTTEGRLPLLSLRAFHVVYDRLQPLLGCQSFSIRRLQYESVDRACFL
VRTTVKKVASTGTSASVSMAAGDGFSRQQHYLWLLSRQKEGEWKKCWLTD
AIISAEHGLLSLWNLPLCEEGRGEDRGEHCVQKEIESSLGITKDDRVSCL
IPFRVEKCNTKTRK back to topmRNA from alignment at CM002461.1:162867..164539+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3342 ID=rna3342|Name=rna3342|organism=Nannochloropsis gaditana|type=mRNA|length=1673bp|location=Sequence derived from alignment at CM002461.1:162867..164539+ (Nannochloropsis gaditana)
ATGgctgctctttttcttgttgaCGCGGTGCCGGCGCTTAGCCGCGCATG
AGTTGCAAGTGGATGGCTGTCAGGCCAAGTTTTGGGCGTTTTCTGGCAAT
GTGGTACAAAGTCCATTTCTTATTAGCGTCACAATCATCACACAGGATAT
AGCGTGGCTCAAGTGCGGTATTAAGTCGGGCTGGAACCTGGTGGTCCCCA
CGGAGGGGATCGAAGGTGGAAAAGGTCTTGTTCCGGAAGACATGGACacg
cgagcaaggaggatgaggaaccTTGATGAGTGTAGTTCGAAACGTCATGC
TCCTGGAAATACGGCATGCTGCGTCACCCAgcccgcctccctgcttctgA
CACGCCTCAACGATGATCTCCTGGCGCGCGTCCTGAGTTTCACGGCCCAG
TGGCACGTCATACGCAGCATTTCTGGAAGCACACGCACGTTCTCCGATCT
TTTGGTCAGGTCCTTGGCCATCAAACCGCACACTCCCCTCCATGTGCTTC
ACAGGGTGATGACGCGCGTAGGTGAGAACGTCCTAGTCTTGGACCTGACT
GGCAACCGCCACTTGAACGACGCCTCGCTCCGTCACATTCTCGAAGAGAC
ATGCCCGCGTCTTCACCATCTCGTCCTCAACTATTGTCGGCAGTTGACTC
CGGCTGTGGTTCCGATCCTGTCCAGGGTTCCACGGGTCGCCGTCCGAGGA
TGTTGGCGTCTGCTcacgccctcgccatccctttcctccgacgTCGTATT
GGAGCTGCAATTGCTGGCGCTGCAGCAAAACGATCGCCATCGCCACGACG
GTGTGGCAAAGTATTTTGAATTTGCTTCGTCAGCCAACCGGCTGGTAGGG
CCGggccaagacggggaggaggaagggggggaggaggagggggaagacac
aaagggagggggaagctctgccgaaggaaggggaagcatCAGTAGACCCG
GAATGTCGACGGGTGGTGCGTTGAATAACAGGCGCTGCGTGCCGGGAACA
GGGGCGGTCgttgaggagggaagggagagcaccACTGAGGGACGTCTACC
CTTGCTGAGCCTCCGCGCTTTCCATGTGGTCTATGATCGGCTTCAGCCTC
TGCTTGGCTGTCAGTCCTTCTCGATACGTCGGCTGCAGTATGAAAGCGTC
GATCGTGCCTGTTTTCTCGTGCGTACGACGGTGAAAAAGGTGGCATCGAC
AGGGACATCGGCCTCAGTGTCGATGGCGGCAGGCGATGGCTTTTCCCGAC
AGCAGCATTATTTGTGGCTCCTCTCCCgacagaaagaaggggaatggaag
aagTGCTGGCTGACGGATGCGATCATATCTGCCGAGCATGGTCTTCTGAG
TCTTTGGAACCTGCCTCTGTGTGAGGAGGGCCGAGGGGAAGATAGGGGTG
AACATTGTGTGCAGAAAGAGATCGAGTCTTCATTGGGTGAGGTGTGGCTG
CCACAACATACCTCAatgcaggcggagggaaaTTTTTGTGTGGAGTAAAT
TCGATAGAGCGACACCTCGTTGCCGCGGTTTTGAAAGTTGATATGGACAA
TTAGGAGACTTGAGATGTGTATTTCAATTTTGACTCGTGGATGAAGGCAT
CACGAAAGATGATCGTGTAAGCTGTCTAATACCTTTCCGCGTTGAAAAAT
GTAACACCAAAACCAGAAAATGA back to topCoding sequence (CDS) from alignment at CM002461.1:162867..164539+ >rna3342 ID=rna3342|Name=rna3342|organism=Nannochloropsis gaditana|type=CDS|length=4185bp|location=Sequence derived from alignment at CM002461.1:162867..164539+ (Nannochloropsis gaditana)
ATGgctgctctttttcttgttgaCGCGGATATAGCGTGGCTCAAGTGCGG
TATTAAGTCGGGCTGGAACCTGGTGGTCCCCACGGAGGGGATCGAAGGTG
GAAAAGGTCTTGTTCCGGAAGACATGGACacgcgagcaaggaggatgagg
aaccTTGATGAGTGTAGTTCGAAACGTCATGCTCCTGGAAATACGGCATG
CTGCGTCACCCAgcccgcctccctgcttctgACACGCCTCAACGATGATC
TCCTGGCGCGCGTCCTGAGTTTCACGGCCCAGTGGCACGTCATACGCAGC
ATTTCTGGAAGCACACGCACGTTCTCCGATCTTTTGGTCAGGTCCTTGGC
CATCAAACCGCACACTCCCCTCCATGTGCTTCACAGGGTGATGACGCGCG
TAGGTGAGAACGTCCTAGTCTTGGACCTGACTGGCAACCGCCACTTGAAC
GACGCCTCGCTCCGTCACATTCTCGAAGAGACATGCCCGCGTCTTCACCA
TCTCGTCCTCAACTATTGTCGGCAGTTGACTCCGGCTGTGGTTCCGATCC
TGTCCAGGGTTCCACGGGTCGCCGTCCGAGGATGTTGGCGTCTGCTcacg
ccctcgccatccctttcctccgacgTCGTATTGGAGCTGCAATTGCTGGC
GCTGCAGCAAAACGATCGCCATCGCCACGACGGTGTGGCAAAGTATTTTG
AATTTGCTTCGTCAGCCAACCGGCTGGTAGGGCCGggccaagacggggag
gaggaagggggggaggaggagggggaagacacaaagggagggggaagctc
tgccgaaggaaggggaagcatCAGTAGACCCGGAATGTCGACGGGTGGTG
CGTTGAATAACAGGCGCTGCGTGCCGGGAACAGGGGCGGTCgttgaggag
ggaagggagagcaccACTGAGGGACGTCTACCCTTGCTGAGCCTCCGCGC
TTTCCATGTGGTCTATGATCGGCTTCAGCCTCTGCTTGGCTGTCAGTCCT
TCTCGATACGTCGGCTGCAGTATGAAAGCGTCGATCGTGCCTGTTTTCTC
GTGCGTACGACGGTGAAAAAGGTGGCATCGACAGGGACATCGGCCTCAGT
GTCGATGGCGGCAGGCGATGGCTTTTCCCGACAGCAGCATTATTTGTGGC
TCCTCTCCCgacagaaagaaggggaatggaagaagTGCTGGCTGACGGAT
GCGATCATATCTGCCGAGCATGGTCTTCTGAGTCTTTGGAACCTGCCTCT
GTGTGAGGAGGGCCGAGGGGAAGATAGGGGTGAACATTGTGTGCAGAAAG
AGATCGAGTCTTCATTGGGCATCACGAAAGATGATCGTGTAAGCTGTCTA
ATACCTTTCCGCGTTGAAAAATGTAACACCAAAACCAGAAAATGAATGgc
tgctctttttcttgttgaCGCGGATATAGCGTGGCTCAAGTGCGGTATTA
AGTCGGGCTGGAACCTGGTGGTCCCCACGGAGGGGATCGAAGGTGGAAAA
GGTCTTGTTCCGGAAGACATGGACacgcgagcaaggaggatgaggaaccT
TGATGAGTGTAGTTCGAAACGTCATGCTCCTGGAAATACGGCATGCTGCG
TCACCCAgcccgcctccctgcttctgACACGCCTCAACGATGATCTCCTG
GCGCGCGTCCTGAGTTTCACGGCCCAGTGGCACGTCATACGCAGCATTTC
TGGAAGCACACGCACGTTCTCCGATCTTTTGGTCAGGTCCTTGGCCATCA
AACCGCACACTCCCCTCCATGTGCTTCACAGGGTGATGACGCGCGTAGGT
GAGAACGTCCTAGTCTTGGACCTGACTGGCAACCGCCACTTGAACGACGC
CTCGCTCCGTCACATTCTCGAAGAGACATGCCCGCGTCTTCACCATCTCG
TCCTCAACTATTGTCGGCAGTTGACTCCGGCTGTGGTTCCGATCCTGTCC
AGGGTTCCACGGGTCGCCGTCCGAGGATGTTGGCGTCTGCTcacgccctc
gccatccctttcctccgacgTCGTATTGGAGCTGCAATTGCTGGCGCTGC
AGCAAAACGATCGCCATCGCCACGACGGTGTGGCAAAGTATTTTGAATTT
GCTTCGTCAGCCAACCGGCTGGTAGGGCCGggccaagacggggaggagga
agggggggaggaggagggggaagacacaaagggagggggaagctctgccg
aaggaaggggaagcatCAGTAGACCCGGAATGTCGACGGGTGGTGCGTTG
AATAACAGGCGCTGCGTGCCGGGAACAGGGGCGGTCgttgaggagggaag
ggagagcaccACTGAGGGACGTCTACCCTTGCTGAGCCTCCGCGCTTTCC
ATGTGGTCTATGATCGGCTTCAGCCTCTGCTTGGCTGTCAGTCCTTCTCG
ATACGTCGGCTGCAGTATGAAAGCGTCGATCGTGCCTGTTTTCTCGTGCG
TACGACGGTGAAAAAGGTGGCATCGACAGGGACATCGGCCTCAGTGTCGA
TGGCGGCAGGCGATGGCTTTTCCCGACAGCAGCATTATTTGTGGCTCCTC
TCCCgacagaaagaaggggaatggaagaagTGCTGGCTGACGGATGCGAT
CATATCTGCCGAGCATGGTCTTCTGAGTCTTTGGAACCTGCCTCTGTGTG
AGGAGGGCCGAGGGGAAGATAGGGGTGAACATTGTGTGCAGAAAGAGATC
GAGTCTTCATTGGGCATCACGAAAGATGATCGTGTAAGCTGTCTAATACC
TTTCCGCGTTGAAAAATGTAACACCAAAACCAGAAAATGAATGgctgctc
tttttcttgttgaCGCGGATATAGCGTGGCTCAAGTGCGGTATTAAGTCG
GGCTGGAACCTGGTGGTCCCCACGGAGGGGATCGAAGGTGGAAAAGGTCT
TGTTCCGGAAGACATGGACacgcgagcaaggaggatgaggaaccTTGATG
AGTGTAGTTCGAAACGTCATGCTCCTGGAAATACGGCATGCTGCGTCACC
CAgcccgcctccctgcttctgACACGCCTCAACGATGATCTCCTGGCGCG
CGTCCTGAGTTTCACGGCCCAGTGGCACGTCATACGCAGCATTTCTGGAA
GCACACGCACGTTCTCCGATCTTTTGGTCAGGTCCTTGGCCATCAAACCG
CACACTCCCCTCCATGTGCTTCACAGGGTGATGACGCGCGTAGGTGAGAA
CGTCCTAGTCTTGGACCTGACTGGCAACCGCCACTTGAACGACGCCTCGC
TCCGTCACATTCTCGAAGAGACATGCCCGCGTCTTCACCATCTCGTCCTC
AACTATTGTCGGCAGTTGACTCCGGCTGTGGTTCCGATCCTGTCCAGGGT
TCCACGGGTCGCCGTCCGAGGATGTTGGCGTCTGCTcacgccctcgccat
ccctttcctccgacgTCGTATTGGAGCTGCAATTGCTGGCGCTGCAGCAA
AACGATCGCCATCGCCACGACGGTGTGGCAAAGTATTTTGAATTTGCTTC
GTCAGCCAACCGGCTGGTAGGGCCGggccaagacggggaggaggaagggg
gggaggaggagggggaagacacaaagggagggggaagctctgccgaagga
aggggaagcatCAGTAGACCCGGAATGTCGACGGGTGGTGCGTTGAATAA
CAGGCGCTGCGTGCCGGGAACAGGGGCGGTCgttgaggagggaagggaga
gcaccACTGAGGGACGTCTACCCTTGCTGAGCCTCCGCGCTTTCCATGTG
GTCTATGATCGGCTTCAGCCTCTGCTTGGCTGTCAGTCCTTCTCGATACG
TCGGCTGCAGTATGAAAGCGTCGATCGTGCCTGTTTTCTCGTGCGTACGA
CGGTGAAAAAGGTGGCATCGACAGGGACATCGGCCTCAGTGTCGATGGCG
GCAGGCGATGGCTTTTCCCGACAGCAGCATTATTTGTGGCTCCTCTCCCg
acagaaagaaggggaatggaagaagTGCTGGCTGACGGATGCGATCATAT
CTGCCGAGCATGGTCTTCTGAGTCTTTGGAACCTGCCTCTGTGTGAGGAG
GGCCGAGGGGAAGATAGGGGTGAACATTGTGTGCAGAAAGAGATCGAGTC
TTCATTGGGCATCACGAAAGATGATCGTGTAAGCTGTCTAATACCTTTCC
GCGTTGAAAAATGTAACACCAAAACCAGAAAATGA back to top
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