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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100226g10.10115.mrna |
| Orig protein id | gnl|cribi|Naga_100226g10.10115 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:160523..162161 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3341 ID=rna3341|Name=rna3341|organism=Nannochloropsis gaditana|type=mRNA|length=1014bp
ATGCGGGCAAGACCATCACTCATTGCAGCCCTGAAGCAATCTTCGAGGCA
CGAAGATGCTCTAGAATTTACGCAACTTTTCCACAGTATCAACTTTGCTC
ATACGCTTCGAGTTTCGGATGCCGTCCTAGAGCGGTACGATGCCAAAAAA
GGTCTAGAAACCACGCACGAAATCACTAAATATCTGTGTCGTACAGATGA
AGGCGGCACATATCTTTCAGCAGGGGTGATCACGGCAATTTTTGACGAAA
TCTCCACGGCTGCATGTATCTTGCAGGATCGCACTCATCGTCCAGGCGTC
TCTGTCGCACTGGATGTGGAAGTGATGGCAAACATCACGCCTGGTCGGAG
TCTGCGTTTAAAAACCTGGGCAGACAAGATCGGGAAAAGTCTCGCTTTCT
TGCGTTTGGACCTGAGGGACGCTGCCAGCGATCAATTGGTGGCTGTCGGG
AAACACTGCAAGTATTTGCCAATGGCAGGCGTTCCATTTTGGGACATGGC
ATTCACGCCACTCTTGTACCCTATTGTTCGAAAATCTTTGCTTGGGTTAA
CACGCAGGCATGTGGCCACCGGGGAGCGTGTCAATACACACGATGCGTCC
TCAATATTTGATCACTTCCCCTTGGACAATTTGACACTGGAAAATGAATC
TGACAAAGGAGACGAGCGTCAAAGGTTGCAAGCAACCCGTGCCAGCCTTC
ATGTGAAGCCACGCCATTGCAATGGATTGTTTAAGATGCACGGAGGGGCT
CTGGCTGTTGCGGCCGAAGAAATCGCGCTTCTCGATGTCGCCGCCCGGAA
GAAAGAAAGCACATCCCAAGCCCCGCGGGCGCGTGCTTTGAGCTTGCATT
ACCTCCAGGCAAACGATCGAGTGGTTGACTTGGCAGCGTGGACGCTCCAG
GACGCGTGTGAAAAGAGCGGTGGGGAGGAGGGAGGGGATGATGGACTCCT
GACGCAGATTGAAGTCCGTCGTGGAGGGAAGTTGTGCAATTCCGGCAGCA
TTATATGGCAATAA back to topprotein sequence of rna3341 >rna3341-protein ID=rna3341-protein|Name=rna3341|organism=Nannochloropsis gaditana|type=polypeptide|length=352bp
MRLIPRYINMHAGDKQERDTTPIGWQHPATEEEGTLDRPSSPVAISGFYL
FTLELLTIALVFSKALHHNAGKKYVRVVQPGCHVAWADMNGDHSTVACCS
LPSSSTTFLSFLLGGDDPPSEGQDGWKNPLCAAATSPRTKHLTSGLALVL
PFVTWFLNCLFSAVAGWWGEGGRTEKGRGKDEEGKEGRRRREAIWTGQRR
RLGLYAAVIMFRTAVLLMLLNRVQAWVQAEEGDTCWYSALRHDGRCRERF
DFADHGVLFISQYLAIQTFETVAILREARSLLHLVTCLASACLISLLSLV
GFYDTVTYFHTRTESLMGVLISLVTVQLPLMLVASGRLRQHRYLRISHFI
KA back to topmRNA from alignment at CM002461.1:160523..162161+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3341 ID=rna3341|Name=rna3341|organism=Nannochloropsis gaditana|type=mRNA|length=1639bp|location=Sequence derived from alignment at CM002461.1:160523..162161+ (Nannochloropsis gaditana)
ATGCGTTTGATCCCACGATATATAAACATGCACGCAGGCGACAAACAAGA
GCGGGACACTACTCCAATCGGTTGGCAACACCCGGCcactgaagaggagg
ggacacTCGACAGACCATCCTCTCCCGTGGCGATTTCCGTGCGTACACAG
GGCTTGTACATGCACCCCTGTTTCGCGCATCACTTGCCCTCACATGTAGA
ATCTTTTCTCTATTCCTCAGGGCTTCTACCTCTTCACCCTCGAACTGCTC
ACGATTGCCCTGGTCTTCTCGaaggccctccaccacaaCGCTGGGAAGAA
GTATGTCCGCGTCGTTCAGCCCGGGTGCCACGTGGCATGGGCCGACATGA
ATGGAGACCACTCCACCGTTGCCTGCtgctccctgccctcctcctccacc
accttcctctcctttcttctcggtGGAGACGACCCGCCCTCCGAGGGTCA
GGACGGATGGAAGAACCCCCTGTGCGCAGCTGCGACGTCACCTCGGACGA
AGCATCTGACCAGTGGCCTGGCGCTGGTCCTTCCCTTTGTGACCTGGTTC
CTGAATTGTTTGTTCTCCGCTGTGGCTGGCTGgtggggcgaggggggccg
gacggagaagggaagggggaaggacgaggaggggaaggaggggaggagga
ggagggaggcgattTGGACGGGCCAGCGAAGACGATTGGGGCTGTATGCG
GCGGTGATCATGTTTCGAACAGCAGTGCTCCTGATGCTCCTCAACCGTGT
GCAGGCATGGGTGCAAGGTgaggtgccgggggagggtgggcgggagggag
ggcgtggtgaGGTGTGCGACGTGGCTACCGGAGGCGCATGGAGGTATAAG
TAGCCTCGCGCCACATCACATCGGTCTTGCTTACAcagcttccttcttcg
cttttcttttcttcgtgGCGGCCCACGgccagcggaggaaggcgataCCT
GTTGGTACTCGGCTCTCCGACACGACGGCAGGTGCAGAGAGCGCTTCGAT
TTCGCCGACCACGGCGTGCTCTTCATCTCCCAGTACCTGGCTATCCAAAC
GTTTGAGACGGTGGCGATCCTGCGGGAGGTAGgggcgaagggcggggcgg
agggcgggaggaaggacacaAGGGAAGTTCTTGGAGGCTCCCTGGGAGTG
TGGACAAGAGAGACGTAGCCAACGCATTGTCGCTCATGTATTTTGGCTCT
TTTTTCCGGGAATGCCGCAGGCCcggagcctcctccacctcgtcacCTGC
CTGGCCTCGGCATGCCtgatctccctcctctccctggtcGGCTTCTATGA
CACGGTCACCTACTTCCATACCCGGACGGAGAGCCTCATGGGCGTCCTCA
TCTGTAggtcgcgggggagggacggggcgcAGGAGCTTGGCAATCTCCGT
TTTCGTCTCGGGGGTGGGGTCAAGCTTGGTGGGAGTGTATGTGGCATGCC
TTCTTATCCTTCACGTATCGCGCTTTCGATCCCTCCATGTAGCGATGGAT
TGCGATTGCGTGCTACCGACCATTTCCCTCATCTACACGCACAGCCCTCG
TCACCGTCCAGCTCCCTCTTATGCTCGTTGCCTCGGGCCGCCTGCGCCAG
CATCGTTATTTGCGTATCAGTCATTTCATCAAAGCTTGA back to topCoding sequence (CDS) from alignment at CM002461.1:160523..162161+ >rna3341 ID=rna3341|Name=rna3341|organism=Nannochloropsis gaditana|type=CDS|length=5295bp|location=Sequence derived from alignment at CM002461.1:160523..162161+ (Nannochloropsis gaditana)
ATGCGTTTGATCCCACGATATATAAACATGCACGCAGGCGACAAACAAGA
GCGGGACACTACTCCAATCGGTTGGCAACACCCGGCcactgaagaggagg
ggacacTCGACAGACCATCCTCTCCCGTGGCGATTTCCGGCTTCTACCTC
TTCACCCTCGAACTGCTCACGATTGCCCTGGTCTTCTCGaaggccctcca
ccacaaCGCTGGGAAGAAGTATGTCCGCGTCGTTCAGCCCGGGTGCCACG
TGGCATGGGCCGACATGAATGGAGACCACTCCACCGTTGCCTGCtgctcc
ctgccctcctcctccaccaccttcctctcctttcttctcggtGGAGACGA
CCCGCCCTCCGAGGGTCAGGACGGATGGAAGAACCCCCTGTGCGCAGCTG
CGACGTCACCTCGGACGAAGCATCTGACCAGTGGCCTGGCGCTGGTCCTT
CCCTTTGTGACCTGGTTCCTGAATTGTTTGTTCTCCGCTGTGGCTGGCTG
gtggggcgaggggggccggacggagaagggaagggggaaggacgaggagg
ggaaggaggggaggaggaggagggaggcgattTGGACGGGCCAGCGAAGA
CGATTGGGGCTGTATGCGGCGGTGATCATGTTTCGAACAGCAGTGCTCCT
GATGCTCCTCAACCGTGTGCAGGCATGGGTGCAAGcggaggaaggcgata
CCTGTTGGTACTCGGCTCTCCGACACGACGGCAGGTGCAGAGAGCGCTTC
GATTTCGCCGACCACGGCGTGCTCTTCATCTCCCAGTACCTGGCTATCCA
AACGTTTGAGACGGTGGCGATCCTGCGGGAGGCCcggagcctcctccacc
tcgtcacCTGCCTGGCCTCGGCATGCCtgatctccctcctctccctggtc
GGCTTCTATGACACGGTCACCTACTTCCATACCCGGACGGAGAGCCTCAT
GGGCGTCCTCATCTCCCTCGTCACCGTCCAGCTCCCTCTTATGCTCGTTG
CCTCGGGCCGCCTGCGCCAGCATCGTTATTTGCGTATCAGTCATTTCATC
AAAGCTTGAATGCGTTTGATCCCACGATATATAAACATGCACGCAGGCGA
CAAACAAGAGCGGGACACTACTCCAATCGGTTGGCAACACCCGGCcactg
aagaggaggggacacTCGACAGACCATCCTCTCCCGTGGCGATTTCCGGC
TTCTACCTCTTCACCCTCGAACTGCTCACGATTGCCCTGGTCTTCTCGaa
ggccctccaccacaaCGCTGGGAAGAAGTATGTCCGCGTCGTTCAGCCCG
GGTGCCACGTGGCATGGGCCGACATGAATGGAGACCACTCCACCGTTGCC
TGCtgctccctgccctcctcctccaccaccttcctctcctttcttctcgg
tGGAGACGACCCGCCCTCCGAGGGTCAGGACGGATGGAAGAACCCCCTGT
GCGCAGCTGCGACGTCACCTCGGACGAAGCATCTGACCAGTGGCCTGGCG
CTGGTCCTTCCCTTTGTGACCTGGTTCCTGAATTGTTTGTTCTCCGCTGT
GGCTGGCTGgtggggcgaggggggccggacggagaagggaagggggaagg
acgaggaggggaaggaggggaggaggaggagggaggcgattTGGACGGGC
CAGCGAAGACGATTGGGGCTGTATGCGGCGGTGATCATGTTTCGAACAGC
AGTGCTCCTGATGCTCCTCAACCGTGTGCAGGCATGGGTGCAAGcggagg
aaggcgataCCTGTTGGTACTCGGCTCTCCGACACGACGGCAGGTGCAGA
GAGCGCTTCGATTTCGCCGACCACGGCGTGCTCTTCATCTCCCAGTACCT
GGCTATCCAAACGTTTGAGACGGTGGCGATCCTGCGGGAGGCCcggagcc
tcctccacctcgtcacCTGCCTGGCCTCGGCATGCCtgatctccctcctc
tccctggtcGGCTTCTATGACACGGTCACCTACTTCCATACCCGGACGGA
GAGCCTCATGGGCGTCCTCATCTCCCTCGTCACCGTCCAGCTCCCTCTTA
TGCTCGTTGCCTCGGGCCGCCTGCGCCAGCATCGTTATTTGCGTATCAGT
CATTTCATCAAAGCTTGAATGCGTTTGATCCCACGATATATAAACATGCA
CGCAGGCGACAAACAAGAGCGGGACACTACTCCAATCGGTTGGCAACACC
CGGCcactgaagaggaggggacacTCGACAGACCATCCTCTCCCGTGGCG
ATTTCCGGCTTCTACCTCTTCACCCTCGAACTGCTCACGATTGCCCTGGT
CTTCTCGaaggccctccaccacaaCGCTGGGAAGAAGTATGTCCGCGTCG
TTCAGCCCGGGTGCCACGTGGCATGGGCCGACATGAATGGAGACCACTCC
ACCGTTGCCTGCtgctccctgccctcctcctccaccaccttcctctcctt
tcttctcggtGGAGACGACCCGCCCTCCGAGGGTCAGGACGGATGGAAGA
ACCCCCTGTGCGCAGCTGCGACGTCACCTCGGACGAAGCATCTGACCAGT
GGCCTGGCGCTGGTCCTTCCCTTTGTGACCTGGTTCCTGAATTGTTTGTT
CTCCGCTGTGGCTGGCTGgtggggcgaggggggccggacggagaagggaa
gggggaaggacgaggaggggaaggaggggaggaggaggagggaggcgatt
TGGACGGGCCAGCGAAGACGATTGGGGCTGTATGCGGCGGTGATCATGTT
TCGAACAGCAGTGCTCCTGATGCTCCTCAACCGTGTGCAGGCATGGGTGC
AAGcggaggaaggcgataCCTGTTGGTACTCGGCTCTCCGACACGACGGC
AGGTGCAGAGAGCGCTTCGATTTCGCCGACCACGGCGTGCTCTTCATCTC
CCAGTACCTGGCTATCCAAACGTTTGAGACGGTGGCGATCCTGCGGGAGG
CCcggagcctcctccacctcgtcacCTGCCTGGCCTCGGCATGCCtgatc
tccctcctctccctggtcGGCTTCTATGACACGGTCACCTACTTCCATAC
CCGGACGGAGAGCCTCATGGGCGTCCTCATCTCCCTCGTCACCGTCCAGC
TCCCTCTTATGCTCGTTGCCTCGGGCCGCCTGCGCCAGCATCGTTATTTG
CGTATCAGTCATTTCATCAAAGCTTGAATGCGTTTGATCCCACGATATAT
AAACATGCACGCAGGCGACAAACAAGAGCGGGACACTACTCCAATCGGTT
GGCAACACCCGGCcactgaagaggaggggacacTCGACAGACCATCCTCT
CCCGTGGCGATTTCCGGCTTCTACCTCTTCACCCTCGAACTGCTCACGAT
TGCCCTGGTCTTCTCGaaggccctccaccacaaCGCTGGGAAGAAGTATG
TCCGCGTCGTTCAGCCCGGGTGCCACGTGGCATGGGCCGACATGAATGGA
GACCACTCCACCGTTGCCTGCtgctccctgccctcctcctccaccacctt
cctctcctttcttctcggtGGAGACGACCCGCCCTCCGAGGGTCAGGACG
GATGGAAGAACCCCCTGTGCGCAGCTGCGACGTCACCTCGGACGAAGCAT
CTGACCAGTGGCCTGGCGCTGGTCCTTCCCTTTGTGACCTGGTTCCTGAA
TTGTTTGTTCTCCGCTGTGGCTGGCTGgtggggcgaggggggccggacgg
agaagggaagggggaaggacgaggaggggaaggaggggaggaggaggagg
gaggcgattTGGACGGGCCAGCGAAGACGATTGGGGCTGTATGCGGCGGT
GATCATGTTTCGAACAGCAGTGCTCCTGATGCTCCTCAACCGTGTGCAGG
CATGGGTGCAAGcggaggaaggcgataCCTGTTGGTACTCGGCTCTCCGA
CACGACGGCAGGTGCAGAGAGCGCTTCGATTTCGCCGACCACGGCGTGCT
CTTCATCTCCCAGTACCTGGCTATCCAAACGTTTGAGACGGTGGCGATCC
TGCGGGAGGCCcggagcctcctccacctcgtcacCTGCCTGGCCTCGGCA
TGCCtgatctccctcctctccctggtcGGCTTCTATGACACGGTCACCTA
CTTCCATACCCGGACGGAGAGCCTCATGGGCGTCCTCATCTCCCTCGTCA
CCGTCCAGCTCCCTCTTATGCTCGTTGCCTCGGGCCGCCTGCGCCAGCAT
CGTTATTTGCGTATCAGTCATTTCATCAAAGCTTGAATGCGTTTGATCCC
ACGATATATAAACATGCACGCAGGCGACAAACAAGAGCGGGACACTACTC
CAATCGGTTGGCAACACCCGGCcactgaagaggaggggacacTCGACAGA
CCATCCTCTCCCGTGGCGATTTCCGGCTTCTACCTCTTCACCCTCGAACT
GCTCACGATTGCCCTGGTCTTCTCGaaggccctccaccacaaCGCTGGGA
AGAAGTATGTCCGCGTCGTTCAGCCCGGGTGCCACGTGGCATGGGCCGAC
ATGAATGGAGACCACTCCACCGTTGCCTGCtgctccctgccctcctcctc
caccaccttcctctcctttcttctcggtGGAGACGACCCGCCCTCCGAGG
GTCAGGACGGATGGAAGAACCCCCTGTGCGCAGCTGCGACGTCACCTCGG
ACGAAGCATCTGACCAGTGGCCTGGCGCTGGTCCTTCCCTTTGTGACCTG
GTTCCTGAATTGTTTGTTCTCCGCTGTGGCTGGCTGgtggggcgaggggg
gccggacggagaagggaagggggaaggacgaggaggggaaggaggggagg
aggaggagggaggcgattTGGACGGGCCAGCGAAGACGATTGGGGCTGTA
TGCGGCGGTGATCATGTTTCGAACAGCAGTGCTCCTGATGCTCCTCAACC
GTGTGCAGGCATGGGTGCAAGcggaggaaggcgataCCTGTTGGTACTCG
GCTCTCCGACACGACGGCAGGTGCAGAGAGCGCTTCGATTTCGCCGACCA
CGGCGTGCTCTTCATCTCCCAGTACCTGGCTATCCAAACGTTTGAGACGG
TGGCGATCCTGCGGGAGGCCcggagcctcctccacctcgtcacCTGCCTG
GCCTCGGCATGCCtgatctccctcctctccctggtcGGCTTCTATGACAC
GGTCACCTACTTCCATACCCGGACGGAGAGCCTCATGGGCGTCCTCATCT
CCCTCGTCACCGTCCAGCTCCCTCTTATGCTCGTTGCCTCGGGCCGCCTG
CGCCAGCATCGTTATTTGCGTATCAGTCATTTCATCAAAGCTTGA back to top
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