EWM27345.1, cds3332 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27345.1 vs. NCBI_GenBank
Match: gi|585109550|gb|EWM27345.1| (hypothetical protein Naga_100226g10 [Nannochloropsis gaditana]) HSP 1 Score: 727.243 bits (1876), Expect = 0.000e+0 Identity = 352/352 (100.00%), Postives = 352/352 (100.00%), Query Frame = 0
Query: 1 MRLIPRYINMHAGDKQERDTTPIGWQHPATEEEGTLDRPSSPVAISGFYLFTLELLTIALVFSKALHHNAGKKYVRVVQPGCHVAWADMNGDHSTVACCSLPSSSTTFLSFLLGGDDPPSEGQDGWKNPLCAAATSPRTKHLTSGLALVLPFVTWFLNCLFSAVAGWWGEGGRTEKGRGKDEEGKEGRRRREAIWTGQRRRLGLYAAVIMFRTAVLLMLLNRVQAWVQAEEGDTCWYSALRHDGRCRERFDFADHGVLFISQYLAIQTFETVAILREARSLLHLVTCLASACLISLLSLVGFYDTVTYFHTRTESLMGVLISLVTVQLPLMLVASGRLRQHRYLRISHFIKA 352
MRLIPRYINMHAGDKQERDTTPIGWQHPATEEEGTLDRPSSPVAISGFYLFTLELLTIALVFSKALHHNAGKKYVRVVQPGCHVAWADMNGDHSTVACCSLPSSSTTFLSFLLGGDDPPSEGQDGWKNPLCAAATSPRTKHLTSGLALVLPFVTWFLNCLFSAVAGWWGEGGRTEKGRGKDEEGKEGRRRREAIWTGQRRRLGLYAAVIMFRTAVLLMLLNRVQAWVQAEEGDTCWYSALRHDGRCRERFDFADHGVLFISQYLAIQTFETVAILREARSLLHLVTCLASACLISLLSLVGFYDTVTYFHTRTESLMGVLISLVTVQLPLMLVASGRLRQHRYLRISHFIKA
Sbjct: 1 MRLIPRYINMHAGDKQERDTTPIGWQHPATEEEGTLDRPSSPVAISGFYLFTLELLTIALVFSKALHHNAGKKYVRVVQPGCHVAWADMNGDHSTVACCSLPSSSTTFLSFLLGGDDPPSEGQDGWKNPLCAAATSPRTKHLTSGLALVLPFVTWFLNCLFSAVAGWWGEGGRTEKGRGKDEEGKEGRRRREAIWTGQRRRLGLYAAVIMFRTAVLLMLLNRVQAWVQAEEGDTCWYSALRHDGRCRERFDFADHGVLFISQYLAIQTFETVAILREARSLLHLVTCLASACLISLLSLVGFYDTVTYFHTRTESLMGVLISLVTVQLPLMLVASGRLRQHRYLRISHFIKA 352
BLAST of EWM27345.1 vs. NCBI_GenBank
Match: gi|553189746|ref|XP_005855064.1| (hypothetical protein NGA_0353900, partial [Nannochloropsis gaditana CCMP526] >gi|422294000|gb|EKU21300.1| hypothetical protein NGA_0353900, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 698.353 bits (1801), Expect = 0.000e+0 Identity = 339/339 (100.00%), Postives = 339/339 (100.00%), Query Frame = 0
Query: 14 DKQERDTTPIGWQHPATEEEGTLDRPSSPVAISGFYLFTLELLTIALVFSKALHHNAGKKYVRVVQPGCHVAWADMNGDHSTVACCSLPSSSTTFLSFLLGGDDPPSEGQDGWKNPLCAAATSPRTKHLTSGLALVLPFVTWFLNCLFSAVAGWWGEGGRTEKGRGKDEEGKEGRRRREAIWTGQRRRLGLYAAVIMFRTAVLLMLLNRVQAWVQAEEGDTCWYSALRHDGRCRERFDFADHGVLFISQYLAIQTFETVAILREARSLLHLVTCLASACLISLLSLVGFYDTVTYFHTRTESLMGVLISLVTVQLPLMLVASGRLRQHRYLRISHFIKA 352
DKQERDTTPIGWQHPATEEEGTLDRPSSPVAISGFYLFTLELLTIALVFSKALHHNAGKKYVRVVQPGCHVAWADMNGDHSTVACCSLPSSSTTFLSFLLGGDDPPSEGQDGWKNPLCAAATSPRTKHLTSGLALVLPFVTWFLNCLFSAVAGWWGEGGRTEKGRGKDEEGKEGRRRREAIWTGQRRRLGLYAAVIMFRTAVLLMLLNRVQAWVQAEEGDTCWYSALRHDGRCRERFDFADHGVLFISQYLAIQTFETVAILREARSLLHLVTCLASACLISLLSLVGFYDTVTYFHTRTESLMGVLISLVTVQLPLMLVASGRLRQHRYLRISHFIKA
Sbjct: 1 DKQERDTTPIGWQHPATEEEGTLDRPSSPVAISGFYLFTLELLTIALVFSKALHHNAGKKYVRVVQPGCHVAWADMNGDHSTVACCSLPSSSTTFLSFLLGGDDPPSEGQDGWKNPLCAAATSPRTKHLTSGLALVLPFVTWFLNCLFSAVAGWWGEGGRTEKGRGKDEEGKEGRRRREAIWTGQRRRLGLYAAVIMFRTAVLLMLLNRVQAWVQAEEGDTCWYSALRHDGRCRERFDFADHGVLFISQYLAIQTFETVAILREARSLLHLVTCLASACLISLLSLVGFYDTVTYFHTRTESLMGVLISLVTVQLPLMLVASGRLRQHRYLRISHFIKA 339
BLAST of EWM27345.1 vs. NCBI_GenBank
Match: gi|553194135|ref|XP_005855893.1| (hypothetical protein NGA_0557200 [Nannochloropsis gaditana CCMP526] >gi|422293169|gb|EKU20469.1| hypothetical protein NGA_0557200 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 365.54 bits (937), Expect = 9.851e-124 Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0
Query: 13 GDKQERDTTPIGWQHPATEEEGTLDRPSSPVAISGFYLFTLELLTIALVFSKALHHNAGKKYVRVVQPGCHVAWADMNGDHSTVACCSLPSSSTTFLSFLLGGDDPPSEGQDGWKNPLCAAATSPRTKHLTSGLALVLPFVTWFLNCLFSAVAGWWGEGGRTEKGRGKDEE 183
GDKQERDTTPIGWQHPATEEEGTLDRPSSPVAISGFYLFTLELLTIALVFSKALHHNAGKKYVRVVQPGCHVAWADMNGDHSTVACCSLPSSSTTFLSFLLGGDDPPSEGQDGWKNPLCAAATSPRTKHLTSGLALVLPFVTWFLNCLFSAVAGWWGEGGRTEKGRGKDEE
Sbjct: 33 GDKQERDTTPIGWQHPATEEEGTLDRPSSPVAISGFYLFTLELLTIALVFSKALHHNAGKKYVRVVQPGCHVAWADMNGDHSTVACCSLPSSSTTFLSFLLGGDDPPSEGQDGWKNPLCAAATSPRTKHLTSGLALVLPFVTWFLNCLFSAVAGWWGEGGRTEKGRGKDEE 203
BLAST of EWM27345.1 vs. NCBI_GenBank
Match: gi|553176944|ref|XP_005852419.1| (hypothetical protein NGA_0730100, partial [Nannochloropsis gaditana CCMP526] >gi|422296114|gb|EKU23413.1| hypothetical protein NGA_0730100, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 250.366 bits (638), Expect = 1.444e-80 Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0
Query: 230 EEGDTCWYSALRHDGRCRERFDFADHGVLFISQYLAIQTFETVAILREARSLLHLVTCLASACLISLLSLVGFYDTVTYFHTRTESLMGVLISLVTVQLPLMLVASGRLRQHRYLRISHFIKA 352
EEGDTCWYSALRHDGRCRERFDFADHGVLFISQYLAIQTFETVAILREARSLLHLVTCLASACLISLLSLVGFYDTVTYFHTRTESLMGVLISLVTVQLPLMLVASGRLRQHRYLRISHFIKA
Sbjct: 1 EEGDTCWYSALRHDGRCRERFDFADHGVLFISQYLAIQTFETVAILREARSLLHLVTCLASACLISLLSLVGFYDTVTYFHTRTESLMGVLISLVTVQLPLMLVASGRLRQHRYLRISHFIKA 123
BLAST of EWM27345.1 vs. NCBI_GenBank
Match: gi|299471085|emb|CBN78944.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 109.383 bits (272), Expect = 9.092e-24 Identity = 83/237 (35.02%), Postives = 103/237 (43.46%), Query Frame = 0
Query: 48 FYLFTLELLTIALVFSKALHHNAGKKYVRV-VQPGCHVAWADMNGDHS------TVACCSLPSSSTTFLSFLLGGDDPPSEGQDGWKNPLCAAATSPRTKHLTSGLALVLPFVTWFLNCLFSAVAGWWGEGGRTEKGRGKDEEGKEGRRRREAIWTGQRRRLGLYAAVIMFRTAVLLMLLNRVQAWVQAEEGDTCWYSALRHDGRCRERFDFADHGVLFISQYLAIQTFETVAILRE 277
F FT L+ +A L NAG K+VR VQ GC +A++ S + CC+ S DG +C S TK LTS LA V+P +N A W G + R + W R LY AVI+ RT L + LN +Q VQ+EE CWY+ LR G+C E FDFADH VL + QY AIQ FE ILRE
Sbjct: 5 FLTFTAVLVAVA---CAGLSRNAGSKFVRTRVQQGCRRNYANVATARSREKPSLDLICCT------------------GSVEDDG----VCIGGGSRTTKTLTSKLAFVIPLAALAVN----AFCDWLAGGATPSRTRAR--------------WN----RFLLYVAVILGRTLGLYLGLNYIQGLVQSEESSNCWYAHLRRSGKCSEHFDFADHVVLAVCQYYAIQVFELCCILRE 194
BLAST of EWM27345.1 vs. NCBI_GenBank
Match: gi|1173927425|gb|OQR81387.1| (hypothetical protein THRCLA_11781 [Thraustotheca clavata]) HSP 1 Score: 97.8265 bits (242), Expect = 6.166e-20 Identity = 79/267 (29.59%), Postives = 119/267 (44.57%), Query Frame = 0
Query: 73 KYVRVVQPGCHVAWADMNGDHSTVACCSLPSSSTTFLSFLLGGDDPPS--EGQDGWKNPLCAAATSPRTKHLTSGLALVLPFVTWFLNCLFSAVAGWWGEGGRTEKGRGKDEEGKEGRRRREAIWTGQRRRLGLYAAVIMFRTAVLLMLLNRVQAWVQAEEGDTCWYSALRHDGRCRERFDFADHGVLFISQYLAIQTFETVAILREARSLLHLVTCLASACL-ISLLSLVGFYDTVTYFHTRTESLMGVLISLVTVQLPLMLVASG 336
KY RV P C W D+ + CC ++ G D+ S GQ W P+ A + GL + LP VT R A++ R+GLY ++++RTA+L N V+ + E +CWYS LR + RC FD ADH VL+++ +LAI FE ILR ++ L CL++ L + LS+ Y T FH+R E+L+G++++ + V LPL L++
Sbjct: 30 KYTRVSGP-CSSNWLDVRNPNGVPVCCDDTFQPPCYI----GMDELHSVTRGQGAWIMPMVAVL-------INFGLTMFLPNVT---------------------------------PRHMTALYN----RIGLYFVLMVYRTAILYGAFNIVEQAIFPAES-SCWYSRLRKNKRCINSFDHADHIVLYMTHFLAISCFEW-KILRREKTHLLKRRCLSAWLLCVMFLSIYAIYHTAYSFHSRWENLVGMVLAQIFVMLPLYLLSEN 245
BLAST of EWM27345.1 vs. NCBI_GenBank
Match: gi|325182103|emb|CCA16556.1| (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 93.5893 bits (231), Expect = 4.070e-18 Identity = 89/314 (28.34%), Postives = 140/314 (44.59%), Query Frame = 0
Query: 59 ALVFSKALH--HNAGKKYVRVVQPGCHVAWADMNGDHST----VACCSLPSSSTTFLSFLLGGDDPPSEGQDGWKNPLCAAATSPRTKHLTSGLALVLPFVTWFLNCLFSAVAGWWGEGGRTEKGRGKDEEGKEGRRRREAIWTGQRRRLGLYAAVIMFRTAVLLMLLNRVQAWV------QAEEGDTCWYSALRHDGRCRERFDFADHGVLFISQYLAIQTFETVAILREARSLLH---LVTCLASACLISLLSLVGF-YDTVTYFHTRTESLMGVLISLVTVQLPLMLVASGRL------RQHRYLRISHFI 350
++FS L+ + KYVRV Q C W +N D S CCS ++S + P G + L A S + A V PF+ +N + S + G + E I RR L LYA +++FR VL LLN V+ + + +CWY LRHD +C + FDF+DH +L ++ Y+AI FE A+ E+ L + + L + + L++ V F Y T YFHT E+++ ++++ + V PL L++ RL RQ +L++ F+
Sbjct: 37 VILFSLILYTSYYLPYKYVRV-QGRCESNWIQLNKDGSASQQGTICCSDDTASIS----------PCYRGME-----LSKIAVSVKG-------AWVFPFLPLIINYI-SVILG--------------------PKPSLEHIRVLTRRAL-LYAGIMLFRLMVLYKLLNGVEKRIVPFILPNHDAKKSCWYRFLRHDQKCVDAFDFSDHLILLVTHYIAIPLFEWFALAIESPRLWYNNLRIVVLRLSVFMELITAVYFIYITTKYFHTPLENVIALVLTEICVLYPLYLLSQDRLANFVTKRQLSWLQLQWFV 305
BLAST of EWM27345.1 vs. NCBI_GenBank
Match: gi|567954011|gb|ETK79652.1| (hypothetical protein L915_14512 [Phytophthora parasitica] >gi|567982658|gb|ETL33070.1| hypothetical protein L916_14419 [Phytophthora parasitica]) HSP 1 Score: 92.0485 bits (227), Expect = 1.323e-17 Identity = 58/157 (36.94%), Postives = 84/157 (53.50%), Query Frame = 0
Query: 200 RRLGLYAAVIMFRTAVLLMLLNRVQA----WVQAEEGDTCWYSALRHDGRCRERFDFADHGVLFISQYLAIQTFETVAILREARSLLHLVTCLASACLISLLSLVGF--YDTVTYFHTRTESLMGVLISLVTVQLPLMLVASGRLRQHRYLRISHFI 350
RR LY A++ FRT VL M L V+ +CWY+ LR RC FD +DH VL +S YLAI FE A+ E+ L L A LI + + + + T +YFHT E+L+G++I+ V PLML+ +++LR+S+F+
Sbjct: 137 RRGLLYVAIMAFRTVVLYMGLGLVEKRLIHLFMGHSDHSCWYAELRRGKRCPADFDHSDHIVLLVSHYLAIPLFEWFAVSVESAG-PSLKRTLLRAWLIIVCGMASYLLFFTASYFHTTAENLVGLIIAQGCVMAPLMLLTQDYFSSYKWLRLSNFV 292
BLAST of EWM27345.1 vs. NCBI_GenBank
Match: gi|570320275|gb|ETO68223.1| (hypothetical protein F444_14929 [Phytophthora parasitica P1976] >gi|570944130|gb|ETP09387.1| hypothetical protein F441_14758 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 92.0485 bits (227), Expect = 1.490e-17 Identity = 58/157 (36.94%), Postives = 84/157 (53.50%), Query Frame = 0
Query: 200 RRLGLYAAVIMFRTAVLLMLLNRVQA----WVQAEEGDTCWYSALRHDGRCRERFDFADHGVLFISQYLAIQTFETVAILREARSLLHLVTCLASACLISLLSLVGF--YDTVTYFHTRTESLMGVLISLVTVQLPLMLVASGRLRQHRYLRISHFI 350
RR LY A++ FRT VL M L V+ +CWY+ LR RC FD +DH VL +S YLAI FE A+ E+ L L A LI + + + + T +YFHT E+L+G++I+ V PLML+ +++LR+S+F+
Sbjct: 137 RRGLLYVAIMAFRTVVLYMGLGLVEKRLIHLFMGHSDHSCWYAELRRGKRCPADFDHSDHIVLLVSHYLAIPLFEWFAVSVESAG-PSLKRTLLRAWLIIVCGMASYLLFFTASYFHTTVENLVGLIIAQGCVMAPLMLLTQDYFSSYKWLRLSNFV 292
BLAST of EWM27345.1 vs. NCBI_GenBank
Match: gi|675203601|ref|XP_008910685.1| (hypothetical protein PPTG_15377 [Phytophthora parasitica INRA-310] >gi|568089165|gb|ETN04015.1| hypothetical protein PPTG_15377 [Phytophthora parasitica INRA-310]) HSP 1 Score: 92.0485 bits (227), Expect = 1.519e-17 Identity = 58/157 (36.94%), Postives = 84/157 (53.50%), Query Frame = 0
Query: 200 RRLGLYAAVIMFRTAVLLMLLNRVQA----WVQAEEGDTCWYSALRHDGRCRERFDFADHGVLFISQYLAIQTFETVAILREARSLLHLVTCLASACLISLLSLVGF--YDTVTYFHTRTESLMGVLISLVTVQLPLMLVASGRLRQHRYLRISHFI 350
RR LY A++ FRT VL M L V+ +CWY+ LR RC FD +DH VL +S YLAI FE A+ E+ L L A LI + + + + T +YFHT E+L+G++I+ V PLML+ +++LR+S+F+
Sbjct: 137 RRGLLYVAIMAFRTVVLYMGLGLVEKRLIHLFMGHSDHSCWYAELRRGKRCPADFDHSDHIVLLVSHYLAIPLFEWFAVSVESAG-PSLKRTLLRAWLIIVCGMASYLLFFTASYFHTTAENLVGLIIAQGCVMAPLMLLTQDYFSSYKWLRLSNFV 292 The following BLAST results are available for this feature:
BLAST of EWM27345.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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