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Properties
| Property Name | Value |
|---|
| Product | bzip transcription |
| Orig transcript id | gnl|cribi|Naga_100394g5.5315.mrna |
| Orig protein id | gnl|cribi|Naga_100394g5.5315 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:140386..143795 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3333 ID=rna3333|Name=rna3333|organism=Nannochloropsis gaditana|type=mRNA|length=1559bp
TGCCACTTTTTCCATCCAGGCGCCGCAACTTGGTCAAAGACCTCGTCCAC
GCGTCCATACATCCGCGCGCGTGCTTCTTTGTTATGTTTGGGAAAATTGC
CACTGTGTCTCCCTCGTTGTTGAGCATGCGTGGCTGGGGGCCCTGCCCTG
ACAAAGGGGCCGGAACTGGTTCATAAATGCTGTCACACCACGGAAATAGG
GGAGGTTGCTCATCAAACTCCTTGCAACAGTCCCGAACTGACAAAGCCCA
TGTAATCTCCACACTGTCCACTCTGCAACAGACGCAGCCGTTCTTACAGG
CTCACACGATCTCGTCCTACGCGATCATGGCCATACCGGGGACACGACGG
GCGCCATTTTCCTTTGATGTGGTGTTCAATCTCCTGCTATGCCTTCTGGC
CTGCAGCTTTGCATTAGCTCAAGACTTCAGCAGTGGCTCCCTCTCCCCCT
CTGCAGAAGTGATGGGCGGGATTACCATGGGCCTTGGCCTGATTTTAGCC
TTCGGAGGCAAGAGCATAATGCGACTGTATTGTGCCGCGGCGGGGTTTCT
GTTCGGAATGGTCGCCTGTCATTTGGCCTTGCTGCGCGTGCAAGCCTCGT
ATGACATGGGGCCAAACCGGGAACTGATCGAGCTCATATGTGTCTTGATT
GCCGGTGTCATTGGAGCGGCGCTGGGACTATGCCTATCTCAATTTGCAGT
GTTCCTCGTGGCGGTGCTCTTCGGTTTAGTGGTCACAATGGCCCTCCTTG
CCATACCGGGCACGGAGCAATTTCGCACGCGCCTGCCCCCGTGGGGCCTC
GCGTTGATCGTGGTGGCACTCTCCGTGGTCTTTTACTTCCTCTTGGAGTC
GTATTTGGTCGTGTTTTTCACGGCCTTGGTGGGTTCTGTGGCCTTTGCCA
ACGGCCTGGACGCGATTTTGAAGACGGGGTTCAACGAGGAGCTGACCCAG
GCCCTGACTTCCAAGGACCCTTCCGACGCGGAGCCCTTTCAGGGAACGGA
GGACATGTTGCCCATTGTGTACGCCTTCTTTGGGTGCTTGGTCTTGGGGA
TGATCACGCAGGTGTGCGTCTCCCGGAAGATGCGGAGACAGGCAGACGGG
GAGGAGGACAGAAAAGCGCAGCAGCGACGACGGGGGATGATGTTTGAGGA
AGAGAAGGACATGGAGAGCGGGGGGGCGGTGGCACGCTTGTACTAAAGGG
AGGCGGGCAGGGAAGGAAAGGGAAGGAGAGGTGCGTCGAAAGCTGGTGGA
GAGCCGGGTGGGGATACCCTGTCCGCGCGCGAGGGTCAAGGGAGGAATGG
ACAGGAAAGCATTTCGCGGGACTGTGGGGTGCGGGACTGGCCGTGAGCCT
TGCGAGGCCTCGGGGAGATGGCACGGCTTTGCTCCCCTAGGGGTATGAGT
TCAAAAGACAGGAAATAGGGAAGGGCGGAAAAGGTTGAAAAGGAAGACCG
TCGTCTGGGTCCTGCGGTCTATATTCGTTATCGGCGTGGATTGCGTCGTT
GGTATTTCATCTCGCTGCTTACAAGTATTCTTTGATAAAGAAAACGTCCA
CCAACCCTC back to topprotein sequence of rna3333 >rna3333-protein ID=rna3333-protein|Name=rna3333|organism=Nannochloropsis gaditana|type=polypeptide|length=562bp
MATLSKEDFMDEDLDLSGLDEDLFIGLMGEGEGVNTFMLDDVREDGLTCP
SVVDDSPSPFTAVSAAVATSFKAECMDDDQSSHVHGESSAEAFDLGVLPE
SIHAQQQDGIIPEQENQSGLKRNAHPRKLSDTGSLSSPHAQQSPHFRGQP
LPRRWPEQDEACRQGRPALAPLLPKGAACTKRPLPRSDSHTRSGGSIGKG
ESDGRRVVKSESFRSGRPPPLSCFMGPGADWEGGERSGKLQDAKMDRHTL
KRPALEDIRSTPSSCSSSTSTGSSHSRSGGNEDAELTSALAALERQGLAP
QELKKQRRLIKNRMASQQHRERQKQQLEHLQASLAAKEEEIMALRVERDV
LRTANGEMKKELGSLRHALGVPGPEGGGGGLGSEGRGGRAGGWHASPSLS
SLSEGTTSSESERSASSPSPSLTNSPVSLLHQGTEEAREGGGEGGYLSDD
PSSQGGRGNGEAFARLFPFSRSPSPSAVYTPPTGAGEQRDGSQGGGVGEG
GRGGGYGRGGFPRILEPSSSSLSWRRLPPSFWELSGAPPAAAVSAVFSGK
APSRLRPWPAHW back to topmRNA from alignment at CM002461.1:140386..143795+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3333 ID=rna3333|Name=rna3333|organism=Nannochloropsis gaditana|type=mRNA|length=3410bp|location=Sequence derived from alignment at CM002461.1:140386..143795+ (Nannochloropsis gaditana)
CGCTAGGCCAAGCAAATTCCCTTATACCCCCTCGCATTCCCGTTGGTCTG
GACACACTTCATCCTTATCAATACACTGGCATTGCCACGGGGTGTCCAGC
CTCGTTTTTGTTGTCATTCTCTCCGGCCGATGTCGGCGGACTCGGGGGCA
CTCCTGGGATTAACCCCTGCATCATgatcctcgtccctcccccataTTAC
TACCACGCCCGGGCAACTCACAACTCCTATTTTGCGCATGTTCTTTCTAA
GATAGTGTCAGGTGTACCCGTGCCGGGTTAGAAGTTTGGTGAGGGACGAC
TTGATCGTTTTTGTCCATCGCTATTTCCCGGCGCCCACACAACGTGTAAC
CCCCCTCACTCTTTGGGGATCGAATCATCGATGGCAACCCTTTCGAAGGA
GGACTTCATGGACGAAGACCTCGACTTATCGGGTTTGGATGAAGACTTGT
TCATTGGTTTGATgggtgaaggggagggagtgaataCTTTCATGCTAGAC
GACGTCAGGGAGGATGGCCTGACATGTCCGTCGGTGGTGGATGattcgcc
ttcccctttcactGCTGTCTCTGCGGCGGTAGCCACGAGTTTCAAGGCGG
AATGCATGGATGACGATCAATCGAGCCATGTGCACGGGGAGAGTTCAGCA
GAGGCGTTTGACCTGGGCGTATTACCGGAAAGCATCCATGCGCAGCAGCA
GGATGGAATTATTCCGGAGCAAGAAAACCAATCAGGACTCAAACGAAACG
CCCATCCGCGAAAACTATCAGACACTGGCTCTTTATCCTCACCGCACGCA
CAACAATCCCCCCATTTCCGGGgccagcccctcccacggcgATGGCCGGA
GCAAGACGAGGCATGTCGGCAAGGGAGGCcggccctcgctcccctcctac
ccAAAGGGGCCGCCTGCACCAAGCGGCCTTTACCCCGGAGCGACAGCCAT
ACCCGCAGTGGTGGTAGTatagggaagggagagagcgacGGTCGACGCGT
CGTGAAAAGCGAATCTTTCCGATCTGGGAGGCCGCCACCTCTCTCGTGTT
TTATGGGCCCCGGGGCCgattgggaaggaggggagcgtTCGGGAAAACTC
CAAGACGCGAAAATGGACCGTCACACTCTCAAGCGCCCTGCCTTGGAAGA
CATCAGGAGCACGCCttcgtcctgctcctcctccacctccaccggcaGCA
GTCACAGCCGCAGTGGTGGGAATGAGGACGCGGAGCtcacctccgccttg
gcggcTCTGGAACGCCAGGGCTTGGCGCCACAGGAACTGAAGAAACAGCG
ACGCTTGATCAAGAACCGGATGGCGTCCCAGCAGCACCGGGAGcggcaga
agcagcagctcgAGCACCTGcaagcctccttggcggcgaaggaggaggaa
atcatgGCCTTGCGGGTAGAGAGGGACGTGCTGCGGACAGCCAACGGCGA
AATGAAGAAAGAATTGGGCAGCCTGCGTCATGCGCTCGGCGTTCCAGGAc
ctgaggggggaggcggggggctggggagcgagggaaggggggggagagcg
ggtgGCTGGcatgcctccccttccctgtcgAGTCTCAGCGAGGGAACTAC
CAGCAGCGAGAGCGAAcgctccgcgtcctccccctcaccttcgtTGACCA
ACAGCCCCGTCTCTCTGCTTCAtcaagggacggaggaagcgagggaggga
gggggcgagggaggctaCCTTTCGGACGACCCGTCGTCccagggtgggcg
gggaaaTGGGGAAGCGTTCGCGCGTttgttccctttttcccgttctcctt
ctccctccgcagTGTACACGCCCCCTACAGGCGCCGGCGAGCAAAGGGAC
GGAAgccagggcggaggagtgggggagggagggagggggggggggtacgG
CCGGGGGGGCTTCCCCCGTATTTTGgagccctcttcctcttcactttCTT
GGCGgcgccttccaccttcctTTTGGGAACTTTCCGGCGcgccaccagca
gcagccgtTTCGGCGGTTTTCTCGGGGAAAGCGCCCTCCCGTCTGCGTCC
CTGGCCGGCCCATTGGTGACGGTGCACGCGGTCAAAGACTTGACGGTCCC
TTGGCTCGCCGCGTCGTGGGCGGAAAATCGACCCGAGTCCGAGGTCGCTg
caggcggggagaaggccTACCTGATCGATCCGGTGGAGCGTCAACCCCAC
AAGTGGCTGGCGGTGGGCGGGCAGGGCACAGGGagcggggaaaagggggg
gaaagggagggagggagggtggggtggaCGACGGCGCCCCCTGGCGCTTT
GGGGAAAGCTTTGAGCTGCGCGTAGGgaccggaggagggcgggggggagg
gcgggggggaggaaagggggtcGTGCGGAACGAGACTCGGActaccttcc
cccctccctccgcccccgcctcgacGCCCCCGACGCGCTTGCGCAAACAG
GAGCGGGCCAAGGCCCAGCTGAagtcggagggcgggaaggagggaggggt
ggagggcgtcAGGAGCAACTTTCCCTTGacggaggacgcggccaaACAGG
TGGATTTCTACACGGGGCGGGACGGGCGGGGACAGCACGGAAAGCAGGtg
gcggcgcgggagggcgggagggaggaaggggggtgggagggagggaggga
gggagggagggagagggggaggggtcaaACCTCCTACCTGTTTTGTCCCC
AGGCCTTCGGTGTCATGGGCCAAGATCTGTCCTCCGGGTATCTTGCGGGA
GTCGAGCAGCTGAGAGtgttgagggagggcgggaacgagggagggcggga
agggggggcgacggCGTCGGTGTGGCCCCGCAATTCGACCCTGGCAGTAG
cagaggacgacggggaggaggaaggggaggctcgCGACGAGGGCCATGGG
GAAgtccgggaaggaaggaaggaggagggagggaaggaggggagggaagg
aaggaaggagctcGATGCGTCCTCGCAGCTTTATTTTTTGCTCCCGGCCC
ACACATTGGACTGGGCGGGGCAGGTACCCGAGGAAACAGCGtcatcgagg
gaggggaggtggttgGAGGTAGGCTGTGGGTTGACCTCTGTGAGGATCGT
GAAAGACGTGAGTTTTGCGGGCACTGGGGCAACGGCGTAgataggaggga
aggagggagggagggagggagatttACCGGGTGTGAGGTTTTGTGCGCTA
TAGTGTTGTAGGCAAGCCATTCGTTGACAAATACGCAAACAAAATCGATG
GGCACTGAAAGAGATGTAGTCGAGGGCAAAAATATTGAATAAGAAATTGA
GGCGAGGCGTCGTGGCTAGAAAAACTGTGATAGGACAGGCGGACAGAGTC
GATAGTCTGAAAACtaaaaagaaaagaggggtgTCGAAACGATTTATCAA
CGCACTGGGA back to topCoding sequence (CDS) from alignment at CM002461.1:140386..143795+ >rna3333 ID=rna3333|Name=rna3333|organism=Nannochloropsis gaditana|type=CDS|length=1689bp|location=Sequence derived from alignment at CM002461.1:140386..143795+ (Nannochloropsis gaditana)
ATGGCAACCCTTTCGAAGGAGGACTTCATGGACGAAGACCTCGACTTATC
GGGTTTGGATGAAGACTTGTTCATTGGTTTGATgggtgaaggggagggag
tgaataCTTTCATGCTAGACGACGTCAGGGAGGATGGCCTGACATGTCCG
TCGGTGGTGGATGattcgccttcccctttcactGCTGTCTCTGCGGCGGT
AGCCACGAGTTTCAAGGCGGAATGCATGGATGACGATCAATCGAGCCATG
TGCACGGGGAGAGTTCAGCAGAGGCGTTTGACCTGGGCGTATTACCGGAA
AGCATCCATGCGCAGCAGCAGGATGGAATTATTCCGGAGCAAGAAAACCA
ATCAGGACTCAAACGAAACGCCCATCCGCGAAAACTATCAGACACTGGCT
CTTTATCCTCACCGCACGCACAACAATCCCCCCATTTCCGGGgccagccc
ctcccacggcgATGGCCGGAGCAAGACGAGGCATGTCGGCAAGGGAGGCc
ggccctcgctcccctcctacccAAAGGGGCCGCCTGCACCAAGCGGCCTT
TACCCCGGAGCGACAGCCATACCCGCAGTGGTGGTAGTatagggaaggga
gagagcgacGGTCGACGCGTCGTGAAAAGCGAATCTTTCCGATCTGGGAG
GCCGCCACCTCTCTCGTGTTTTATGGGCCCCGGGGCCgattgggaaggag
gggagcgtTCGGGAAAACTCCAAGACGCGAAAATGGACCGTCACACTCTC
AAGCGCCCTGCCTTGGAAGACATCAGGAGCACGCCttcgtcctgctcctc
ctccacctccaccggcaGCAGTCACAGCCGCAGTGGTGGGAATGAGGACG
CGGAGCtcacctccgccttggcggcTCTGGAACGCCAGGGCTTGGCGCCA
CAGGAACTGAAGAAACAGCGACGCTTGATCAAGAACCGGATGGCGTCCCA
GCAGCACCGGGAGcggcagaagcagcagctcgAGCACCTGcaagcctcct
tggcggcgaaggaggaggaaatcatgGCCTTGCGGGTAGAGAGGGACGTG
CTGCGGACAGCCAACGGCGAAATGAAGAAAGAATTGGGCAGCCTGCGTCA
TGCGCTCGGCGTTCCAGGAcctgaggggggaggcggggggctggggagcg
agggaaggggggggagagcgggtgGCTGGcatgcctccccttccctgtcg
AGTCTCAGCGAGGGAACTACCAGCAGCGAGAGCGAAcgctccgcgtcctc
cccctcaccttcgtTGACCAACAGCCCCGTCTCTCTGCTTCAtcaaggga
cggaggaagcgagggagggagggggcgagggaggctaCCTTTCGGACGAC
CCGTCGTCccagggtgggcggggaaaTGGGGAAGCGTTCGCGCGTttgtt
ccctttttcccgttctccttctccctccgcagTGTACACGCCCCCTACAG
GCGCCGGCGAGCAAAGGGACGGAAgccagggcggaggagtgggggaggga
gggagggggggggggtacgGCCGGGGGGGCTTCCCCCGTATTTTGgagcc
ctcttcctcttcactttCTTGGCGgcgccttccaccttcctTTTGGGAAC
TTTCCGGCGcgccaccagcagcagccgtTTCGGCGGTTTTCTCGGGGAAA
GCGCCCTCCCGTCTGCGTCCCTGGCCGGCCCATTGGTGA back to top
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