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Properties
| Property Name | Value |
|---|
| Product | protein of unknown function DUF4203 |
| Orig transcript id | gnl|cribi|Naga_100394g4.5318.mrna |
| Orig protein id | gnl|cribi|Naga_100394g4.5318 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:137384..138942 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3332 ID=rna3332|Name=rna3332|organism=Nannochloropsis gaditana|type=mRNA|length=1855bp
TATTGCCAATACATGCCTGGTTAAAATCAAAAATGAAGAGCAATTGAATT
GGTACCATACAGCTGCATCCAGCTTCACCGTACACGTCCTTAATGGCTCG
TCAAAAAGTGCCAAGCACTTGTCGTAGTTTGACGTCAAGGTATCCACACG
GGTGGGACGTAAATTCTTGCTCGCTGTTCTTTTCGGGGCCATTTTTTGGG
CGTGCTGATGCCATGCGAAATTTTCCAACGGGACATGAAGAGTAATGATA
GGGATAGATGCTATGAGGGATTGTCCATTTACTTTGACTGTTTTGTGCGC
ATGTTTCCTCTGACATGGCTTTACCATGCAACTCACCGACCTCCTCTTTC
TAGACATACGTACTGCCTTGAAGAAACAACTTACGACGAAGCTTTTGTGG
AGCACCTTCCGAAATGACTGATTTGGCAAATTCTCAAGTTCCTACCGACA
CTGCGAACCGTATGCGACACCCTCAAACGGAGCAGGGTAAAGTCACGCGG
CCTTTGGAGTCAGCAGAGGAGAACGCGACCGGCGCAGTGGGGTGGGTGAA
GGACAAGATGGCTGGGGCCTGGAAAGCGGTCAAATCCGGCACTACCACTG
GGACGCAAAAGACGAGCGAAGGACTTGGGTCCATGAAATCGAAAGTTGGA
GATGCCTTCAAACAAGGACGCAACAAAGCTGTTGACACCGCGCACGAGGT
AGCGGAGAAGACCCAGGAAGTCGCGTCACCGATCCAGGAGCGGGCCACGC
AGGGGTTCGACACGGAGAAGGAGAAAGGAAAAGGAACGATTGGAAGCGTG
AAGGATCACGTCGTGGAGAAAATCGAAGGGACTACGGATGCCGCCAAGGC
CAGGGCTCAGGAAGCGTTGGATCAAGGACGGGAGTATGAAAAGGAGGTGG
AAAGTAAGGCGCGTGAGACGGAACAAAAAATGGAGGAAAAAGCCGAAGCC
GCCAAGACGGGTTTCGCGGCCATGGGAGAGAAGATCAAAGCTGCCGGTCA
AGCCGGCAAAGGTCGTTTGGGGAACGCGATGAACGCGTGGAAACCGAAGG
CCCAAGAAACAACGGAGAAAGCTCAAGAAACGGCGGAGAGAGCCCAGGAA
ACGGCCGAGGACGTGGCCGAGAAGGCGGGCCGTGCGACGGGACAAGCCAA
GGGCTGGGCAGAGGGCGTGGCTGACGAAGTGAAGGAGAAGGGACAGTGAC
GGAAAGGGCGGTGGGGTCCTGTGCCGATCCTCTTTTGTGAGACACAAGGC
AGGGAGGGAGGGGAAGCGTCCGGTGCGGTGGAGCGAAAGGTGGTCGGGTC
TTCTGCCGTGGGAGCGCATCGAAGGGCAAAGCAAGCGGCGGAAGCCGCGT
ATCAGGAAGCAGTTGAGAGATGTACATCACGGAAAAGGCAAAGAAGAAAT
GGATTCACGCAACAATATCGAACAGAGAAGGCATGAGAACAACGCCTTGA
AACGATTCGTATGGCCTATATATGTGGAAAAACGAAAAAAAAATCTAGTA
GGGACGTATCAATTTCGTTCGGGGAGATCTAAAAAATACGGTTTTCAGGG
AAGCGTACGGAAAATATAGTGAGCATGATGACCGTATTGGAGCGCAAGCC
TTTACTAAGGCTTTTCGTCAGGTATGGCGGAGCGTTGGCGTTGAAACACG
GGGAGTGGAGGTTTTCGCTCAGATCATGCATGAATATATAAGGCCGGACG
TAGTAAGTCACTAAGGCTCCATGCTTGTGAAAGATTGGATGTCCTTTCAA
ATCTAGGGTGTTTAAAGCGGTCGAGTAGGTGTAGTGAGGCTGTTATTGGA
AAGAAACTAGCAAATTATTACGTGATATCGTGCTGTCCGCGACAGTTGTT
GCTCC back to topprotein sequence of rna3332 >rna3332-protein ID=rna3332-protein|Name=rna3332|organism=Nannochloropsis gaditana|type=polypeptide|length=339bp
MLSHHGNRGGCSSNSLQQSRTDKAHVISTLSTLQQTQPFLQAHTISSYAI
MAIPGTRRAPFSFDVVFNLLLCLLACSFALAQDFSSGSLSPSAEVMGGIT
MGLGLILAFGGKSIMRLYCAAAGFLFGMVACHLALLRVQASYDMGPNREL
IELICVLIAGVIGAALGLCLSQFAVFLVAVLFGLVVTMALLAIPGTEQFR
TRLPPWGLALIVVALSVVFYFLLESYLVVFFTALVGSVAFANGLDAILKT
GFNEELTQALTSKDPSDAEPFQGTEDMLPIVYAFFGCLVLGMITQVCVSR
KMRRQADGEEDRKAQQRRRGMMFEEEKDMESGGAVARLY back to topmRNA from alignment at CM002461.1:137384..138942+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3332 ID=rna3332|Name=rna3332|organism=Nannochloropsis gaditana|type=mRNA|length=1559bp|location=Sequence derived from alignment at CM002461.1:137384..138942+ (Nannochloropsis gaditana)
TGCCACTTTTTCCATCCAGGCGCCGCAACTTGGTCAAAGACCTCGTCCAC
GCGTCCATACATCCGCGCGCGTGCTTCTTTGTTATGTTTGGGAAAATTGC
CACTGTGTCTCCCTCGTTGTTGAGCATGCGTGGCTGGGGGCCCTGCCCTG
ACAAAGGGGCCGGAACTGGTTCATAAATGCTGTCACACCACGGAAATAGG
GGAGGTTGCTCATCAAACTCCTTGCAACAGTCCCGAACTGACAAAGCCCA
TGTAATCTCCACACTGTCCACTCTGCAACAGACGCAGCCGTTCTTACAGG
CTCACACGATCTCGTCCTACGCGATCATGGCCATACCGGGGACACGACGG
GCGCCATTTTCCTTTGATGTGGTGTTCAATCTCCTGCTATGCCTTCTGGC
CTGCAGCTTTGCATTAGCTCAAGACTTCAGCAgtggctccctctccccct
ctgcaGAAGTGATGGGCGGGATTACCATGGGCCTTGGCCTGATTTTAGCC
TTCGGAGGCAAGAGCATAATGCGACTGTATTGTGCCGCGGCGGGGTTTCT
GTTCGGAATGGTCGCCTGTCATTTGGCCTTGCTGCGCGTGCAAGCCTCGT
ATGACATGGGGCCAAACCGGGAACTGATCGAGCTCATATGTGTCTTGATT
GCCGGTGTCATTGGAGCGGCGCTGGGACTATGCCTATCTCAATTTGCAGT
GTTCCTCGTGGCGGTGCTCTTCGGTTTAGTGGTCACAATGGCCCTCCTTG
CCATACCGGGCACGGAGCAATTTCGCACGCGCCTGCCCCCGTGGGGCCTC
GCGTTGATCGTGGTGGCACTCTCCGTGGTCTTTTACTTCCTCTTGGAGTC
GTATTTGGTCGTGTTTTTCACGGCCTTGGTGGGTTCTGTGGCCTTTGCCA
ACGGCCTGGACGCGATTTTGAAGACGGGGTTCAACGAGGAGCTGACCCAG
GCCCTGACTTCCAAGGACCCTTCCGACGCGGAGCCCTTTCAGGGAACGGA
GGACATGTTGCCCATTGTGTACGCCTTCTTTGGGTGCTTGGTCTTGGGGA
TGATCACGCAGGTGTGCGTCTCCCGGAAGATGCGGAGACAggcagacggg
gaggaggacagaaaAGCGCAGCAGCGACGACGGGGGATGATGtttgagga
agagaaggacatggagagcgggggggcggtggcacgCTTGTACtaaaggg
aggcgggcagggaaggaaagggaaggagaggtgcgTCGAAAGCTGGTGGA
GAGCCGGGTGGGGATACCCTGTCCGCGCGCGAGGGtcaagggaggaatgg
acagGAAAGCATTTCGCGGGACTGTGGGGTGCGGGACTGGCCGTGAGCCT
TGCGAGGCCTCGGGGAGATGGCACGGCTTTGCTCCCCTAGGGGTATGAGT
TCAAAAGACAGGAAatagggaagggcggaaaaGGTTGAAAAGGAAGACCG
TCGTCTGGGTCCTGCGGTCTATATTCGTTATCGGCGTGGATTGCGTCGTT
GGTATTTCATCTCGCTGCTTACAAGTATTCTTTGATAAAGAAAACGTCCA
CCAACCCTC back to topCoding sequence (CDS) from alignment at CM002461.1:137384..138942+ >rna3332 ID=rna3332|Name=rna3332|organism=Nannochloropsis gaditana|type=CDS|length=1020bp|location=Sequence derived from alignment at CM002461.1:137384..138942+ (Nannochloropsis gaditana)
ATGCTGTCACACCACGGAAATAGGGGAGGTTGCTCATCAAACTCCTTGCA
ACAGTCCCGAACTGACAAAGCCCATGTAATCTCCACACTGTCCACTCTGC
AACAGACGCAGCCGTTCTTACAGGCTCACACGATCTCGTCCTACGCGATC
ATGGCCATACCGGGGACACGACGGGCGCCATTTTCCTTTGATGTGGTGTT
CAATCTCCTGCTATGCCTTCTGGCCTGCAGCTTTGCATTAGCTCAAGACT
TCAGCAgtggctccctctccccctctgcaGAAGTGATGGGCGGGATTACC
ATGGGCCTTGGCCTGATTTTAGCCTTCGGAGGCAAGAGCATAATGCGACT
GTATTGTGCCGCGGCGGGGTTTCTGTTCGGAATGGTCGCCTGTCATTTGG
CCTTGCTGCGCGTGCAAGCCTCGTATGACATGGGGCCAAACCGGGAACTG
ATCGAGCTCATATGTGTCTTGATTGCCGGTGTCATTGGAGCGGCGCTGGG
ACTATGCCTATCTCAATTTGCAGTGTTCCTCGTGGCGGTGCTCTTCGGTT
TAGTGGTCACAATGGCCCTCCTTGCCATACCGGGCACGGAGCAATTTCGC
ACGCGCCTGCCCCCGTGGGGCCTCGCGTTGATCGTGGTGGCACTCTCCGT
GGTCTTTTACTTCCTCTTGGAGTCGTATTTGGTCGTGTTTTTCACGGCCT
TGGTGGGTTCTGTGGCCTTTGCCAACGGCCTGGACGCGATTTTGAAGACG
GGGTTCAACGAGGAGCTGACCCAGGCCCTGACTTCCAAGGACCCTTCCGA
CGCGGAGCCCTTTCAGGGAACGGAGGACATGTTGCCCATTGTGTACGCCT
TCTTTGGGTGCTTGGTCTTGGGGATGATCACGCAGGTGTGCGTCTCCCGG
AAGATGCGGAGACAggcagacggggaggaggacagaaaAGCGCAGCAGCG
ACGACGGGGGATGATGtttgaggaagagaaggacatggagagcggggggg
cggtggcacgCTTGTACtaa back to top
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