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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100394g3.5317.mrna |
| Orig protein id | gnl|cribi|Naga_100394g3.5317 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:135055..137145 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3331 ID=rna3331|Name=rna3331|organism=Nannochloropsis gaditana|type=mRNA|length=1782bp
CGCATGGCATCAGCACGCCCAAAAAATGGCCCCGAAAAGAACAGCGAGCA
AGAATTTACGTCCCACCCGTGTGGATACCTTGACGTCAAACTACGACAAG
TGCTTGGCACTTTTTGACGAGCCATTAAGGACGTGTACGGTGAAGCTGGA
TGCAGCTGTATGGTACCAATTCAATTGCTCTTCATTTTTGATTTTAACCA
GGCATGTATTGGCAATACGATATAAGCAGCAGAAGAGAAATAAGTTAGTC
AGCGACCGACATATGCACTTCAAGTCATAATGCCCGCACGGTTCATCAAA
CTGTGGGGCCAGCGTGACAATGAGGAGATGGGATCGTGGTGGTGTGTGCG
TTGCATTGCGTAGCACTGTATTGCAACAAGTCTGGGTTGCGCTTCAATGG
GTGGCGGAAGCGGCCAATGCCGTGTAGTCAACGTGTTGCAGTCAGCTCTA
CTTGTTTCTACACGTCTCTCCCAGCCTATCCCGATCGTACTGGTGTTTCC
CGACCAAGCATGCACAAAGGGCCAACGGCATGCCCATTGTACTTAGCAAT
GTGGAGTATCACATCACGAAACGAGACAAGGAGTGATGGCCTCCCCCAAA
GACAGATGATGCAATGGAGTGGAAAGTTTATCTTCTCATTTTCCTGCTCA
CCTCCCCCCCTGCGGCAGAAAGGATGAGCTAAGGTCTCACCGCCCGGACG
AGAGCAGGGATGGTGGCATCCGCCATATCCACTTACGCAGTCGCTCCAGG
TCTTGCGTTGGTTCTTGTCGTTATCCTTGCGGTAGGCCGCGCTCGTCCTT
TTTCTCCCAGCTTGCATCGGCGGCATCCACGGAGCGGGTCCTTCCTTCCT
CGCCAGCTGCAACGGGTCTGGACGGGCCGTGACGATCGTCCCTGCCATGG
CAAAGACACCATCGCCTTCCGCGCAGATGCCGTTTTGGTTTTGGGTGGAG
ACCGCCACCGGGAATTGACGGCAGTACGTCTCTTTATGGCAGGCCAGCTC
GAGTCTCTCCACCCTCCCCCCGCACGCGCACACGCCTTTTCCCCTGCTAT
ACACCTGGACTACGACCAGATTCCTCTCTTTGTGTCGTCGGGTGCCCTCA
GCCCCGACGAATTGCCCCCTGCTACCTTGCATCCCTTCCGGCGGATCGTC
TTGGACCGGCGCGCTCTGTGCACATTGACCAATTTTACCTCGCTTCTGCC
TACCTTCCGTGCGGCAAAGATCAGGCATGTGTTGGTGGTGACCTCCCAGA
GTCATTTGTCGCGGGCCTTGACGGTGGGTAGCATCGTCCTTGGCTCCCAA
GGGATTCGGGTTCGCGGACTCGGTGTGGAGGATGGAGGGGGGGAGGAGGG
GTGGGGGAGGAGGGGGAGGGACGCGCTTCGAGCGTGGTGGTGGGTGTGGA
CCGGGTGGGAGGGAAGGGAAGTGGTGAGATGGGCGCATCCGATGAGGAAG
GAAGAGCAATGATGGATCGGGAGGGCCTTGACGGGGGGGAGGTGGCGGGA
GGGAGGGCGGGAGGGAGGGCGGGAGGGAGGGGTTCAGGGTCTGTGAAGGG
CGGGTGCGTGCGTTTGACAGGGAAACTGTGGATTAATAATGACGTCTCTG
CAAGAAGCCGCACACTTACACGCAGTGAACATGGAAAAGAAGCTGGGCGT
GATAGCATCCCAAAGAATCTCTCCTTGACTTGCCTTGTGGCTTCCCTACC
CCGAAGCCTAACGAAACGAAACGCTCGTGTCGATCGCGGAAAATAAAGAA
AACATATCACCCTCCCCGCCACTGCCACATCC back to topprotein sequence of rna3331 >rna3331-protein ID=rna3331-protein|Name=rna3331|organism=Nannochloropsis gaditana|type=polypeptide|length=261bp
MTDLANSQVPTDTANRMRHPQTEQGKVTRPLESAEENATGAVGWVKDKMA
GAWKAVKSGTTTGTQKTSEGLGSMKSKVGDAFKQGRNKAVDTAHEVAEKT
QEVASPIQERATQGFDTEKEKGKGTIGSVKDHVVEKIEGTTDAAKARAQE
ALDQGREYEKEVESKARETEQKMEEKAEAAKTGFAAMGEKIKAAGQAGKG
RLGNAMNAWKPKAQETTEKAQETAERAQETAEDVAEKAGRATGQAKGWAE
GVADEVKEKGQ back to topmRNA from alignment at CM002461.1:135055..137145+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3331 ID=rna3331|Name=rna3331|organism=Nannochloropsis gaditana|type=mRNA|length=2091bp|location=Sequence derived from alignment at CM002461.1:135055..137145+ (Nannochloropsis gaditana)
TATTGCCAATACATGCCTGGTTAAAATCAAAAATGAAGAGCAATTGAATT
GGTACCATACAGCTGCATCCAGCTTCACCGTACACGTCCTTAATGGCTCG
TCAAAAAGTGCCAAGCACTTGTCGTAGTTTGACGTCAAGGTATCCACACG
GGTGGGACGTAAATTCTTGCTCGCTGTTCTTTTCGGGGCCATTTTTTGGG
CGTGCTGATGCCATGCGAAATTTTCCAACGGGACATGAAGAGTAATGATA
GGGATAGATGCTATGAGGGATTGTCCATTTACTTTGACTGTTTTGTGCGC
ATGTTTCCTCTGACATGGCTTTACCATGCAACTCAccgacctcctctttc
tAGACATACGTACTGCCTTGAAGAAACAACTTACGACGAAGCTTTTGTGG
AGCACCTTCCGAAATGACTGATTTGGCAAATTCTCAAGTTCCTACCGACA
CTGCGAACCGTATGCGACACCCTCAAACGGAGCAGGGTAAAGTCACGCGG
CCTTTGGAGTCAGCAGAGGAGAACGCGACCGGCGCAGTGGGGTGGGTGAA
GGACAAGATGGCTGGGGCCTGGAAAGCGGTCAAATCCGGCACTACCACTG
GGACGCAAAAGACGAGCGAAGGACTTGGGTCCATGAAATCGAAAGTTGGA
GATGCCTTCAAACAAGGACGCAACAAAGCTGTTGACACCGCGCACGAGGT
AGCGGAGAAGACCCAGGAAGTCGCGTCACCGATCCAGGAGCGGGCCACGC
AGGGGTTCgacacggagaaggagaaaggaaaaggaacgaTTGGAAGCGTG
AAGGATCACGTCGTGGAGAAAATCGAAGGGACTACGGATgccgccaaggc
cagggCTCAGGAAGCGTTGGATCAAGGACGGGAGTatgaaaaggaggtgg
aaagtaAGGCGCGTGAGACGGAacaaaaaatggaggaaaaagccgaAGCC
GCCAAGACGGGTTTCGCGGCCATGGGAGAGAAGATCAAAGCTGCCGGTCA
AGCCGGCAAAGGTCGTTTGGGGAACGCGATGAACGCGTGGAAACCGAAGG
CCCAAGAAACAACGGAGAAAGCTCAAGAAACGGCGGAGAGAGCCCAGGAA
ACGGCcgaggacgtggccgagaaggcgggcCGTGCGACGGGACAAGCCAA
GGGCTGGGCAGAGGGCGTGGCTGACgaagtgaaggagaagggacaGTGAC
GGAAAGGGCGGTGGGGTCCTGTGCCGATCCTCTTTTGTGAGACacaaggc
agggagggaggggaagcgtcCGGTGCGGTGGTAGgtctgagggaggggat
ggtgaCACGGCGAACGATTGAGAGAGAACGTTTATCGTAGAGAAGGGTCG
ATACTTGTCTTTGGAAGACATCAGATTGACGGGACGCTTGTGCCTGTATC
GTTTCCCGGGGGGTTTGGAGGGCGTCTCCCTGTGTGCGTTCCACAGTAAT
GATGACGACGCACACGGTCGTGTAGGAAAGAGATGTAGACTGATCCTCGT
TCTTTCTATATTACAGGAGCGAAAGGTGGTCGGGTCTTCTGCCGTGGGAG
CGCATCGAAGGGCAAAGCAAGCGGCGGAAGCCGCGTATCAGGAAGCAGTT
GAGAGATGTACATCACggaaaaggcaaagaagaaATGGATTCACGCAACA
ATATCGAACAGAGAAGGCATGAGAACAACGCCTTGAAACGATTCGTATGG
CCTATATATGTGGAAAAACGAAAAAAAAATCTAGTAGGGACGTATCAATT
TCGTTCGGGGAGATCTAAAAAATACGGTTTTCAGGGAAGCGTACGGAAAA
TATAGTGAGCATGATGACCGTATTGGAGCGCAAGCCTTTACTAAGGCTTT
TCGTCAGGTATGGCGGAGCGTTGGCGTTGAAACACGGGGAGTGGAGGTTT
TCGCTCAGATCATGCATGAATATATAAGGCCGGACGTAGTAAGTCACTAA
GGCTCCATGCTTGTGAAAGATTGGATGTCCTTTCAAATCTAGGGTGTTTA
AAGCGGTCGAGTAGGTGTAGTGAGGCTGTTATTGGAAAGAAACTAGCAAA
TTATTACGTGATATCGTGCTGTCCGCGACAGTTGTTGCTCC back to topCoding sequence (CDS) from alignment at CM002461.1:135055..137145+ >rna3331 ID=rna3331|Name=rna3331|organism=Nannochloropsis gaditana|type=CDS|length=786bp|location=Sequence derived from alignment at CM002461.1:135055..137145+ (Nannochloropsis gaditana)
ATGACTGATTTGGCAAATTCTCAAGTTCCTACCGACACTGCGAACCGTAT
GCGACACCCTCAAACGGAGCAGGGTAAAGTCACGCGGCCTTTGGAGTCAG
CAGAGGAGAACGCGACCGGCGCAGTGGGGTGGGTGAAGGACAAGATGGCT
GGGGCCTGGAAAGCGGTCAAATCCGGCACTACCACTGGGACGCAAAAGAC
GAGCGAAGGACTTGGGTCCATGAAATCGAAAGTTGGAGATGCCTTCAAAC
AAGGACGCAACAAAGCTGTTGACACCGCGCACGAGGTAGCGGAGAAGACC
CAGGAAGTCGCGTCACCGATCCAGGAGCGGGCCACGCAGGGGTTCgacac
ggagaaggagaaaggaaaaggaacgaTTGGAAGCGTGAAGGATCACGTCG
TGGAGAAAATCGAAGGGACTACGGATgccgccaaggccagggCTCAGGAA
GCGTTGGATCAAGGACGGGAGTatgaaaaggaggtggaaagtaAGGCGCG
TGAGACGGAacaaaaaatggaggaaaaagccgaAGCCGCCAAGACGGGTT
TCGCGGCCATGGGAGAGAAGATCAAAGCTGCCGGTCAAGCCGGCAAAGGT
CGTTTGGGGAACGCGATGAACGCGTGGAAACCGAAGGCCCAAGAAACAAC
GGAGAAAGCTCAAGAAACGGCGGAGAGAGCCCAGGAAACGGCcgaggacg
tggccgagaaggcgggcCGTGCGACGGGACAAGCCAAGGGCTGGGCAGAG
GGCGTGGCTGACgaagtgaaggagaagggacaGTGA back to top
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