EWM27351.1, cds3322 (CDS) Nannochloropsis gaditana

Overview
NameEWM27351.1
Unique Namecds3322
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:135468..136253 +

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Properties
Property NameValue
Protein idEWM27351.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100394g3.5317.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:135468..136253 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM27351.1 vs. NCBI_GenBank
Match: gi|585109560|gb|EWM27351.1| (hypothetical protein Naga_100394g3 [Nannochloropsis gaditana])

HSP 1 Score: 510.375 bits (1313), Expect = 0.000e+0
Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0 
Query:    1 MTDLANSQVPTDTANRMRHPQTEQGKVTRPLESAEENATGAVGWVKDKMAGAWKAVKSGTTTGTQKTSEGLGSMKSKVGDAFKQGRNKAVDTAHEVAEKTQEVASPIQERATQGFDTEKEKGKGTIGSVKDHVVEKIEGTTDAAKARAQEALDQGREYEKEVESKARETEQKMEEKAEAAKTGFAAMGEKIKAAGQAGKGRLGNAMNAWKPKAQETTEKAQETAERAQETAEDVAEKAGRATGQAKGWAEGVADEVKEKGQ 261
            MTDLANSQVPTDTANRMRHPQTEQGKVTRPLESAEENATGAVGWVKDKMAGAWKAVKSGTTTGTQKTSEGLGSMKSKVGDAFKQGRNKAVDTAHEVAEKTQEVASPIQERATQGFDTEKEKGKGTIGSVKDHVVEKIEGTTDAAKARAQEALDQGREYEKEVESKARETEQKMEEKAEAAKTGFAAMGEKIKAAGQAGKGRLGNAMNAWKPKAQETTEKAQETAERAQETAEDVAEKAGRATGQAKGWAEGVADEVKEKGQ
Sbjct:    1 MTDLANSQVPTDTANRMRHPQTEQGKVTRPLESAEENATGAVGWVKDKMAGAWKAVKSGTTTGTQKTSEGLGSMKSKVGDAFKQGRNKAVDTAHEVAEKTQEVASPIQERATQGFDTEKEKGKGTIGSVKDHVVEKIEGTTDAAKARAQEALDQGREYEKEVESKARETEQKMEEKAEAAKTGFAAMGEKIKAAGQAGKGRLGNAMNAWKPKAQETTEKAQETAERAQETAEDVAEKAGRATGQAKGWAEGVADEVKEKGQ 261
[Close]
BLAST of EWM27351.1 vs. NCBI_GenBank
Match: gi|553194144|ref|XP_005855894.1| (hypothetical protein NGA_0557300 [Nannochloropsis gaditana CCMP526] >gi|422293170|gb|EKU20470.1| hypothetical protein NGA_0557300 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 408.297 bits (1048), Expect = 7.179e-143
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0 
Query:   49 MAGAWKAVKSGTTTGTQKTSEGLGSMKSKVGDAFKQGRNKAVDTAHEVAEKTQEVASPIQERATQGFDTEKEKGKGTIGSVKDHVVEKIEGTTDAAKARAQEALDQGREYEKEVESKARETEQKMEEKAEAAKTGFAAMGEKIKAAGQAGKGRLGNAMNAWKPKAQETTEKAQETAERAQETAEDVAEKAGRATGQAKGWAEGVADEVKEKGQ 261
            MAGAWKAVKSGTTTGTQKTSEGLGSMKSKVGDAFKQGRNKAVDTAHEVAEKTQEVASPIQERATQGFDTEKEKGKGTIGSVKDHVVEKIEGTTDAAKARAQEALDQGREYEKEVESKARETEQKMEEKAEAAKTGFAAMGEKIKAAGQAGKGRLGNAMNAWKPKAQETTEKAQETAERAQETAEDVAEKAGRATGQAKGWAEGVADEVKEKGQ
Sbjct:    1 MAGAWKAVKSGTTTGTQKTSEGLGSMKSKVGDAFKQGRNKAVDTAHEVAEKTQEVASPIQERATQGFDTEKEKGKGTIGSVKDHVVEKIEGTTDAAKARAQEALDQGREYEKEVESKARETEQKMEEKAEAAKTGFAAMGEKIKAAGQAGKGRLGNAMNAWKPKAQETTEKAQETAERAQETAEDVAEKAGRATGQAKGWAEGVADEVKEKGQ 213
The following BLAST results are available for this feature:
BLAST of EWM27351.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585109560|gb|EWM27351.1|0.000e+0100.00hypothetical protein Naga_100394g3 [Nannochloropsi... [more]
gi|553194144|ref|XP_005855894.1|7.179e-143100.00hypothetical protein NGA_0557300 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3331rna3331Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications