rna3327, rna3327 (mRNA) Nannochloropsis gaditana

Overview
Namerna3327
Unique Namerna3327
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length431
Alignment locationCM002461.1:129712..130197 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101048g3.714.mrna
Orig protein idgnl|cribi|Naga_101048g3.714
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:129712..130197 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101048g3gene3203Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna3327rna3327-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM27353.1cds3318Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna3327 ID=rna3327|Name=rna3327|organism=Nannochloropsis gaditana|type=mRNA|length=431bp
AGGCCCCTAGATGATGCCCATCCCCTCCTCCTCCCTCCCTGCGGCCGAAG
AGATTTCGCGCTCTACTACACGGCGCCCCTTTTCCCTCTCAGGGTATCCT
CGCCCTCCTCCTCCTCCTCCTCCCCTATCTCCTCCTGCCTCGTCCATCTT
CTCCTCCTCGGCGAGCTCAGCAAGTGGGTTCCCCATTCTCCCCAACGCTT
CTCCGCCCTCTCCCTCCTCCCTCACTCCCTCCTCCTCGCCCTGGAGGGCG
GGAGAGAGGAAGAGGTAGAGCTCTCCTTCGCGATCCTCGACGAGGGGTGG
GCGCAGAGACGGAGCCTGGAGGGCGGGAAGGAGGGCGAGATGGGCGTGGA
GGTGGAGGTGGAGAGGTTGCGAGTGCGATTGGATTGGAAGGGGGAAGCCC
GGGTCCGGTTCCGCGTTGAAGCCGGGAGGGA
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protein sequence of rna3327

>rna3327-protein ID=rna3327-protein|Name=rna3327|organism=Nannochloropsis gaditana|type=polypeptide|length=78bp
MNEGPYSTSTQTRHFTHAIVRSHKHFSIIAKTASQVDGKDYIHVSLLEWK
RKLRKGQEPRLPFIILWSRNLYQLYDGR
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mRNA from alignment at CM002461.1:129712..130197+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna3327 ID=rna3327|Name=rna3327|organism=Nannochloropsis gaditana|type=mRNA|length=486bp|location=Sequence derived from alignment at CM002461.1:129712..130197+ (Nannochloropsis gaditana)
ATGAATGAAGTCTGAGCCAATGTCTGCTTACCATAAATTGCCCGTGTTTG
ATATTTTGGCTGGAAAACAAACTTCCTCTCTGTTCTGATGCATGCCAAAC
AAATGACATAAATCCATTTTCTAACCGGAATTTCTCTCATTTCcctgtct
ctctctctctcttttcctttttttttccttcccccgaaACAGGGGCCATA
CTCGACTTCTACCCAAACCAGACATTTCACACATGCGATTGTGAGGAGTC
ACAAACACTTCTCAATAATTGCTAAAACCGCATCTCAAGTCGATGGCAAA
GACTACATCCATGTCTCGCTGTGCGTGCCTTGATCCGGCCCTTTATAACG
CTGAACGATACATTGCTGGCATTCGTATGCCGCAAGGTTggaatggaaga
gaaaaCTTCGGAAGGGACAAGAACCACGGTTGCCGTTCATAATACTGTGG
TCACGTAATCTCTATCAACTATACGATGGAAGGTAA
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Coding sequence (CDS) from alignment at CM002461.1:129712..130197+

>rna3327 ID=rna3327|Name=rna3327|organism=Nannochloropsis gaditana|type=CDS|length=711bp|location=Sequence derived from alignment at CM002461.1:129712..130197+ (Nannochloropsis gaditana)
ATGAATGAAGGGCCATACTCGACTTCTACCCAAACCAGACATTTCACACA
TGCGATTGTGAGGAGTCACAAACACTTCTCAATAATTGCTAAAACCGCAT
CTCAAGTCGATGGCAAAGACTACATCCATGTCTCGCTGTTggaatggaag
agaaaaCTTCGGAAGGGACAAGAACCACGGTTGCCGTTCATAATACTGTG
GTCACGTAATCTCTATCAACTATACGATGGAAGGTAAATGAATGAAGGGC
CATACTCGACTTCTACCCAAACCAGACATTTCACACATGCGATTGTGAGG
AGTCACAAACACTTCTCAATAATTGCTAAAACCGCATCTCAAGTCGATGG
CAAAGACTACATCCATGTCTCGCTGTTggaatggaagagaaaaCTTCGGA
AGGGACAAGAACCACGGTTGCCGTTCATAATACTGTGGTCACGTAATCTC
TATCAACTATACGATGGAAGGTAAATGAATGAAGGGCCATACTCGACTTC
TACCCAAACCAGACATTTCACACATGCGATTGTGAGGAGTCACAAACACT
TCTCAATAATTGCTAAAACCGCATCTCAAGTCGATGGCAAAGACTACATC
CATGTCTCGCTGTTggaatggaagagaaaaCTTCGGAAGGGACAAGAACC
ACGGTTGCCGTTCATAATACTGTGGTCACGTAATCTCTATCAACTATACG
ATGGAAGGTAA
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Synonyms
Publications