EWM27353.1, cds3318 (CDS) Nannochloropsis gaditana

Overview
NameEWM27353.1
Unique Namecds3318
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:129712..129720 +
Alignment locationCM002461.1:129904..130031 +
Alignment locationCM002461.1:130098..130197 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27353.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101048g3.714.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:129712..129720 +
CM002461.1supercontigCM002461.1:129904..130031 +
CM002461.1supercontigCM002461.1:130098..130197 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM27353.1 vs. NCBI_GenBank
Match: gi|585109564|gb|EWM27353.1| (hypothetical protein Naga_101048g3 [Nannochloropsis gaditana])

HSP 1 Score: 164.851 bits (416), Expect = 9.769e-52
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0 
Query:    1 MNEGPYSTSTQTRHFTHAIVRSHKHFSIIAKTASQVDGKDYIHVSLLEWKRKLRKGQEPRLPFIILWSRNLYQLYDGR 78
            MNEGPYSTSTQTRHFTHAIVRSHKHFSIIAKTASQVDGKDYIHVSLLEWKRKLRKGQEPRLPFIILWSRNLYQLYDGR
Sbjct:    1 MNEGPYSTSTQTRHFTHAIVRSHKHFSIIAKTASQVDGKDYIHVSLLEWKRKLRKGQEPRLPFIILWSRNLYQLYDGR 78
The following BLAST results are available for this feature:
BLAST of EWM27353.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585109564|gb|EWM27353.1|9.769e-52100.00hypothetical protein Naga_101048g3 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3327rna3327Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications