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Properties
Property Name | Value |
Product | Plastid lipid-associated protein/fibrillin conserved domain protein |
Orig transcript id | gnl|cribi|Naga_101253g1.10008.mrna |
Orig protein id | gnl|cribi|Naga_101253g1.10008 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002461.1 | supercontig | CM002461.1:119971..120867 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3322 ID=rna3322|Name=rna3322|organism=Nannochloropsis gaditana|type=mRNA|length=1182bp TCTTTTTCTCCCCTTGACTGCTTTGTGATTCATCCCCACTGCCCTTCAAC CTATCTCAAGCACATTACCATGAGAACCATCTCTCCCCCCTCCACCATCC TTCTCCCGCCCTCCCTTCCTCCCCCCCTCAGGCATGGGAGGCGCCATGGA TTTGGTCGGAAGTGGGAATCGGGTGGTCGTCACCATGGAGCACACCGCCA AGGGTGATAGCAAGAAGATCTTGAAGAGCTGCACGCTGCCCTTGACTGGG CCCAAGGTGGTGGATAGGATCATAACAGAGCTCTGTGTCTTCGATGTCGA CAAGGTTCGCGCCATTTTCCCCCACTCCCTTCACTCCCGGGGCTTCTCTG TTGTCTTCCGTAATGCCTTCCGATCTATTTGGCTGTAATACGCGCAATTG ATAAGGATCTTGGTCCTCCTTTTTTGTTCCTTATCCCTCGCTTTACCTAT ACGTCTTCGATCGTTGATTTCTCTGTCTCATTCCCTCCAATATAGCCGTT TTATTCTTTCTCCTCCGCCCCCTTCGTTCCCTCCTCGCTCACTTCCTCGT GCGCCCTCGTTTTCGTGTCCCCGCTTCCTTCCTACATCACGCAATTTAAA AAGTCTCTTGGCATCTACTTTAAGATCTTCGATTCATTCCTCCCCTCCCT TCCTCTCTCTTCTCCCGTATGTCTTAGGCCAAGGGCGAATTGGTCCTGAC GGAGATCTTTCCAGGGGTGACTGTCGACGAGATACGCGCCAAGACCGACG CCGAGTTCAGGGAGGCGAAAGGAGGACTAAAAGTGGTCCAATTGTAAAAA AAGGGGGAGTGGGAAATGGGGGGCTCGACTGGGGTGTCAGCTGCTGGTGG GAGGGTAAAGAAATGGGAAGAAGCAGAGAAATTTGGGGGAGAAGTAAGGC GGAAGAGGCAAAGGAGTGGAGACCTCGCGTAACAGGGCGACCTGTAAATG TAGTGGAGGAAAAACCGATCGTATTTTTACAAAGAAATAAATACACAGAG GCTTAGCGCTGATGTGTCCTAACGAAGAAGGAGCGAGAGAAAGAGAGCGC GACATGTACAATACCTTCGGTATCGACTTCTTCGGACAAAATTAAAAGTC AATGGGTCATTCCTGATACGAGAATGTCGATGTGACTGACAAGAACCTCT GAAGCCAGAAGATGTTTAATCAAAACGTCCCT back to topprotein sequence of rna3322 >rna3322-protein ID=rna3322-protein|Name=rna3322|organism=Nannochloropsis gaditana|type=polypeptide|length=184bp MSRLCAKPLFLLLLLPCIASAFLLPFPRASIPSRSPSVLLSSVEGADYPS DTADPEPSPEAREGNATVFPSFTDEGKVQLREKFKCQIYKAAARLNRGQL ANLDQQNEMSNLIAQLEAMGSGRPAETEAVEGVWELVYSDVAPFRASPFF MTVGKVMEGTTLSAEEFFRLHRLATRGSEIGKVG back to topmRNA from alignment at CM002461.1:119971..120867+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3322 ID=rna3322|Name=rna3322|organism=Nannochloropsis gaditana|type=mRNA|length=897bp|location=Sequence derived from alignment at CM002461.1:119971..120867+ (Nannochloropsis gaditana) cctttcctttgttCCACTCCGCGAGCGCCCACCATTTCAGTGCCTAACCA
CGGCTTCTATACCACACACACCGAATTTTAGGTCTTAGCATGTCACGGCT
ATGTGCAAagccgcttttcctccttttgcttCTCCCATGCATTgcttccg
ccttcctccttccatttcctcgtgcctccattccttcccgtTCACCGTCC
GTCCTGCTCTCCTCAGTGGAAGGAGCTGATTATCCCTCCGACACCGCCGA
CCCTGAACCCTCTCCGGAAGCGCGTGAAGGGAACGCCAcggtcttcccct
cctttaccGACGAGGGCAAGGTCCAGCTGCGGGAAAAATTTAAGTGCCAG
ATCTACAAGGCCGCTGCCCGGCTGAACCGCGGTCAGCTGGCGAATTTGGA
TCAACAGGTACGACTTCATGACCGAGTAGTCTTCAGCTATAGTTGAACTT
TGCCTGCAGCCCTCATACCACCTTTGTTTCGACGATGCATTGGGGTTGCG
GCATGTCGAAAATGAGGCCCCTGTGAGACTTCCTTGGTACAGGCAGTGTC
CGATTTCTCATTTCTTTTACCTCCGGCCTCTGCCctgcttgcttccttcc
cctccactcgCATcacaccttccctcctctgccacctcTGTCCGCCCTAT
CGTACTCGTCAGAACGAAATGAGCAATTTGATCGCTCAGTTGGAGGCCAT
GGGGTCCGGGCGTCCGGCCGAGaccgaggcggtggaaggggtgtgGGAGC
TGGTGTACTCGGACGTCGCCCCGTTCCgagcctctcctttcttcatgACG
GTGGGGAAGGTCATGGAAGGCACCACGCTGAGCGCGGAGGAATTCTTCCG
GCTCCACCGACTCGCGACCCGGGGGAGCGAGATTGGGAAGGTAGGGA back to topCoding sequence (CDS) from alignment at CM002461.1:119971..120867+ >rna3322 ID=rna3322|Name=rna3322|organism=Nannochloropsis gaditana|type=CDS|length=1106bp|location=Sequence derived from alignment at CM002461.1:119971..120867+ (Nannochloropsis gaditana) ATGTCACGGCTATGTGCAAagccgcttttcctccttttgcttCTCCCATG CATTgcttccgccttcctccttccatttcctcgtgcctccattccttccc gtTCACCGTCCGTCCTGCTCTCCTCAGTGGAAGGAGCTGATTATCCCTCC GACACCGCCGACCCTGAACCCTCTCCGGAAGCGCGTGAAGGGAACGCCAc ggtcttcccctcctttaccGACGAGGGCAAGGTCCAGCTGCGGGAAAAAT TTAAGTGCCAGATCTACAAGGCCGCTGCCCGGCTGAACCGCGGTCAGCTG GCGAATTTGGATCAACAGAACGAAATGAGCAATTTGATCGCTCAGTTGGA GGCCATGGGGTCCGGGCGTCCGGCCGAGaccgaggcggtggaaggggtgt gGGAGCTGGTGTACTCGGACGTCGCCCCGTTCCgagcctctcctttcttc atgACGGTGGGGAAGGTCATGGAAGGCACCACGCTGAGCGCGGAGGAATT CTTCCGGCTCCACCGACTCGCGACCCGGGGGAGCGAGATTGGGAAGGTAG GGAATGTCACGGCTATGTGCAAagccgcttttcctccttttgcttCTCCC ATGCATTgcttccgccttcctccttccatttcctcgtgcctccattcctt cccgtTCACCGTCCGTCCTGCTCTCCTCAGTGGAAGGAGCTGATTATCCC TCCGACACCGCCGACCCTGAACCCTCTCCGGAAGCGCGTGAAGGGAACGC CAcggtcttcccctcctttaccGACGAGGGCAAGGTCCAGCTGCGGGAAA AATTTAAGTGCCAGATCTACAAGGCCGCTGCCCGGCTGAACCGCGGTCAG CTGGCGAATTTGGATCAACAGAACGAAATGAGCAATTTGATCGCTCAGTT GGAGGCCATGGGGTCCGGGCGTCCGGCCGAGaccgaggcggtggaagggg tgtgGGAGCTGGTGTACTCGGACGTCGCCCCGTTCCgagcctctcctttc ttcatgACGGTGGGGAAGGTCATGGAAGGCACCACGCTGAGCGCGGAGGA ATTCTTCCGGCTCCACCGACTCGCGACCCGGGGGAGCGAGATTGGGAAGG TAGGGA back to top
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