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Properties
| Property Name | Value |
|---|
| Product | caax prenyl protease 2 |
| Orig transcript id | gnl|cribi|Naga_100216g1.231.mrna |
| Orig protein id | gnl|cribi|Naga_100216g1.231 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:67536..68888 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3310 ID=rna3310|Name=rna3310|organism=Nannochloropsis gaditana|type=mRNA|length=809bp
TTCCATCATTTCTGGTGCTTGGATCAAAGACAGAGAGAAAACATGTGCGG
AACGTTTTAATTGATGGACTACGAGGCGATCCTCAGTAGCCGCGCCGTCA
TAGTTCCCTTCGTGTATCACTTCCCTCAGGCATGATTTCTAATTCCTACA
CACACATATACCTCAGGATCGGAGAGGCGTGTTCAAGAGAGGCAACGCTC
CATTTTTAATGGTGCTACACCCAGCGGTCCTTCCGCCCTCCCTGCTTCGA
GCCCATGCCGGGCTACAGCCCTCCTCCCTCACACTAGCCTTGGCCGCATG
TCTCAGTATGGCGATCCTGTACGTCGCGTCCTTGTATCTCTTGCCCGCCT
CCATCCGACTCCGGCACCGCGATGATCCTCTTCATATCAAGGCACGATTC
GTGTCCGTGATTGTGGCGTGCCTCCTTTCAATACGGATTTTTCTTCTCTT
CGCCAGTCCCTCGCCAGGAGCCGGTCTCCCCATTTATGTCTGGCTGGGTC
TTACAGGATGGAACAATCCCAGCGTCTTCCTCCCCTTGCTCGCCATCGTT
TGCCTCTTCCTCGGGCCTATCACGGTTATGATAGCGGAATGCTACTACGA
CCGCTGGTACGAGCTGGTCGAATACCAGTCGTCCCGATCCCTCCTCTACC
ACCTCTCTCGCCGCACCGCACCCTCTCCTCGAAGCTGGCTGGAGTGGGTG
GATCAACGCAGGCGCCGACACGGACAGGGCAAAGACGTCCTCTGGAGGAA
CCTAGTGGTGGCGCCCCTGACGGAGGCAAGAGGGGAGGGAGGGAGGGAGG
GAGGGAGAG back to topprotein sequence of rna3310 >rna3310-protein ID=rna3310-protein|Name=rna3310|organism=Nannochloropsis gaditana|type=polypeptide|length=166bp
MLPILYQAASSPSLSHSRPSSSSPPLGPLILLTPLFFGLAHTHHALQRLR
DGVPARIAFLGVCLQIAYTSIFGWHAAFLFLRTGSLLPCVLTHSFCNLMG
LPNLAFLLPPPSLLPPPPSSFILHAHRGKILGVYALGIGLFAILLYPCSD
PQWYYREEGPRPLYWR back to topmRNA from alignment at CM002461.1:67536..68888+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3310 ID=rna3310|Name=rna3310|organism=Nannochloropsis gaditana|type=mRNA|length=1353bp|location=Sequence derived from alignment at CM002461.1:67536..68888+ (Nannochloropsis gaditana)
ccctccctccctccctcccttccttccttccttctccgggCACAGGAACT
CGTCTTTCGCGCCTGCATGCTCCCCATTCTTTATCaggctgcctcctctc
cttctctctctcattcgcgcccttcttccagctctccccccttggggccc
ctcatccttctcacccccctcttcttcggccTCGCCCACACGCACCACGC
ACTACAGCGGCTCCGAGATGGAGTGCCggtaggaagggaaagcgggggga
ggggagagtgggaggatgggggggaaaggtgtGGCGGGAATGggtgaagg
aaaaaggggagggggctttgGCTGGTCAAGGCGGTCAAGCCCTGTGTGGT
TAGCATGGCGTCTCCACTCTCTGCCCTGCCCTTATCTCACCCACATCTCC
TTTCTGCCACACCCCAGGCGCGCATCGCTTTCCTCGGTGTGTGCCTTCAG
ATCGCCTACACGAGTATTTTCGGTTGGCAcgcgggtggggagggagggag
ggagagagggattgagggaggaggaagaggggaaattagaaggagaaaag
gcagTGTGTCACAGGCATACGGTTCTCATCCACCacacctctttccttcc
cccctttcccccagccttcctcttcctccgtactggctccctcctcccgt
gcgTCCTCACGCACTCTTTTTGCAACTTGATGGGTCTGCCCAAcctggct
ttcctccttcctcctccctccctcctcccacctccgccctcctccttcat
cctccacgcgcacCGCGGGAAGATCCTGGGCGTGTATGCCCTCGGCATCG
GCCTTTTTGCCATTCTCTTGTACCCGTGCTCAGATCCCCAGTGGTACTAC
CGGGAAGAGGGTCCGCGCCCTCTGTACTGGCGGtgagaaggcggagacgg
aaaggaaagaggtaCGTCGGGTTCTTGACGTGCCAGCTGCCGTGGGAGTA
CTAGGAGGGGGGGTTTAACTTGTTTGTGAGGTGGAAATGGGATCATCGCA
AGTCGCACGATAGGTTTTGGGTCGCGCAAGACGGCTGTGGAATTAGATGA
CGGGGAAGCCAGCTTCCAACCGTGATAAGGAGACCTAGCTCATAAAGGCT
GAGTACGATGGactgggaaaaggaagagtgaTAGGTTGGATTTCATGTAC
AATAGACAATGGAAAGCGCGAGCAATAAGGTATGCTGGTAAAATAGTAAA
CATGTGTGTGGCAAAAGACTTGTGGCACGGATCGGCGTACGGGCCACACC
ATCACGAGATGAGTGTTCTAGACCTGCAGCGGCAAAGCTTTCTTCAAAGG
CTGCTTGCGATGTAAAGGAAAGTGTATAACGAACGACATACTAACTGTAG
AAG back to topCoding sequence (CDS) from alignment at CM002461.1:67536..68888+ >rna3310 ID=rna3310|Name=rna3310|organism=Nannochloropsis gaditana|type=CDS|length=1503bp|location=Sequence derived from alignment at CM002461.1:67536..68888+ (Nannochloropsis gaditana)
ATGCTCCCCATTCTTTATCaggctgcctcctctccttctctctctcattc
gcgcccttcttccagctctccccccttggggcccctcatccttctcaccc
ccctcttcttcggccTCGCCCACACGCACCACGCACTACAGCGGCTCCGA
GATGGAGTGCCgGCGCGCATCGCTTTCCTCGGTGTGTGCCTTCAGATCGC
CTACACGAGTATTTTCGGTTGGCAcgcggccttcctcttcctccgtactg
gctccctcctcccgtgcgTCCTCACGCACTCTTTTTGCAACTTGATGGGT
CTGCCCAAcctggctttcctccttcctcctccctccctcctcccacctcc
gccctcctccttcatcctccacgcgcacCGCGGGAAGATCCTGGGCGTGT
ATGCCCTCGGCATCGGCCTTTTTGCCATTCTCTTGTACCCGTGCTCAGAT
CCCCAGTGGTACTACCGGGAAGAGGGTCCGCGCCCTCTGTACTGGCGGtg
aATGCTCCCCATTCTTTATCaggctgcctcctctccttctctctctcatt
cgcgcccttcttccagctctccccccttggggcccctcatccttctcacc
cccctcttcttcggccTCGCCCACACGCACCACGCACTACAGCGGCTCCG
AGATGGAGTGCCgGCGCGCATCGCTTTCCTCGGTGTGTGCCTTCAGATCG
CCTACACGAGTATTTTCGGTTGGCAcgcggccttcctcttcctccgtact
ggctccctcctcccgtgcgTCCTCACGCACTCTTTTTGCAACTTGATGGG
TCTGCCCAAcctggctttcctccttcctcctccctccctcctcccacctc
cgccctcctccttcatcctccacgcgcacCGCGGGAAGATCCTGGGCGTG
TATGCCCTCGGCATCGGCCTTTTTGCCATTCTCTTGTACCCGTGCTCAGA
TCCCCAGTGGTACTACCGGGAAGAGGGTCCGCGCCCTCTGTACTGGCGGt
gaATGCTCCCCATTCTTTATCaggctgcctcctctccttctctctctcat
tcgcgcccttcttccagctctccccccttggggcccctcatccttctcac
ccccctcttcttcggccTCGCCCACACGCACCACGCACTACAGCGGCTCC
GAGATGGAGTGCCgGCGCGCATCGCTTTCCTCGGTGTGTGCCTTCAGATC
GCCTACACGAGTATTTTCGGTTGGCAcgcggccttcctcttcctccgtac
tggctccctcctcccgtgcgTCCTCACGCACTCTTTTTGCAACTTGATGG
GTCTGCCCAAcctggctttcctccttcctcctccctccctcctcccacct
ccgccctcctccttcatcctccacgcgcacCGCGGGAAGATCCTGGGCGT
GTATGCCCTCGGCATCGGCCTTTTTGCCATTCTCTTGTACCCGTGCTCAG
ATCCCCAGTGGTACTACCGGGAAGAGGGTCCGCGCCCTCTGTACTGGCGG
tga back to top
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