EWM27369.1, cds3301 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27369.1 vs. NCBI_GenBank
Match: gi|585109591|gb|EWM27369.1| (caax prenyl protease 2 [Nannochloropsis gaditana]) HSP 1 Score: 324.324 bits (830), Expect = 4.135e-112 Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0
Query: 1 MLPILYQAASSPSLSHSRPSSSSPPLGPLILLTPLFFGLAHTHHALQRLRDGVPARIAFLGVCLQIAYTSIFGWHAAFLFLRTGSLLPCVLTHSFCNLMGLPNLAFLLPPPSLLPPPPSSFILHAHRGKILGVYALGIGLFAILLYPCSDPQWYYREEGPRPLYWR 166
MLPILYQAASSPSLSHSRPSSSSPPLGPLILLTPLFFGLAHTHHALQRLRDGVPARIAFLGVCLQIAYTSIFGWHAAFLFLRTGSLLPCVLTHSFCNLMGLPNLAFLLPPPSLLPPPPSSFILHAHRGKILGVYALGIGLFAILLYPCSDPQWYYREEGPRPLYWR
Sbjct: 1 MLPILYQAASSPSLSHSRPSSSSPPLGPLILLTPLFFGLAHTHHALQRLRDGVPARIAFLGVCLQIAYTSIFGWHAAFLFLRTGSLLPCVLTHSFCNLMGLPNLAFLLPPPSLLPPPPSSFILHAHRGKILGVYALGIGLFAILLYPCSDPQWYYREEGPRPLYWR 166
BLAST of EWM27369.1 vs. NCBI_GenBank
Match: gi|675891380|ref|XP_009031192.1| (hypothetical protein HELRODRAFT_70936, partial [Helobdella robusta] >gi|555687325|gb|ESN90557.1| hypothetical protein HELRODRAFT_70936, partial [Helobdella robusta]) HSP 1 Score: 105.916 bits (263), Expect = 1.546e-25 Identity = 58/153 (37.91%), Postives = 88/153 (57.52%), Query Frame = 0
Query: 3 PILYQAASSPSLSHSRPSSSSPPLGPLILLTPLFFGLAHTHHALQRLRDGVPARIAFLGVCLQIAYTSIFGWHAAFLFLRTG-SLLPCVLTHSFCNLMGLPNLAFLLPPPSLLPPPPSSFILHAHRGKILGVYALGIGLFAILLYPCSDPQWY 154
I+Y+A P+L + + S I+L+PLFFG+AH HH ++DG+P + A + C Q YT++FG ++AF+F+RTG ++LPC+L+H FCN MG PN +L + + KI+ Y +G+ LF ILL P + P Y
Sbjct: 71 EIVYRACMLPTLIPNFGVAKS------IVLSPLFFGMAHFHHVFALVKDGMPLKSALIKACFQFTYTTLFGIYSAFVFVRTGDTILPCILSHMFCNHMGFPNFIEVLQCQD-----------QSMKSKIIFFYVVGLVLFFILLVPLTKPSLY 206
BLAST of EWM27369.1 vs. NCBI_GenBank
Match: gi|1173949733|gb|OQR97739.1| (peptidase family U48 [Achlya hypogyna]) HSP 1 Score: 108.227 bits (269), Expect = 2.395e-25 Identity = 53/123 (43.09%), Postives = 78/123 (63.41%), Query Frame = 0
Query: 29 LILLTPLFFGLAHTHHALQRLRDGVPARIAFLGVCLQIAYTSIFGWHAAFLFLRTGSLLPCVLTHSFCNLMGLPNLAFLLPPPSLLPPPPSSFILHAHRGKILGVYALGIGLFAILLYPCSDP 151
++ L+PL FG+AH HH + +R G+P A V Q+ YT++FG +A FLFLRTG L+ ++ H+FCN+MG P+L+F+ P L+ +R ILGVY +GI F++LLYP + P
Sbjct: 187 IVFLSPLAFGVAHAHHFYEHVRGGMPWMRALAIVVFQLVYTTVFGIYATFLFLRTGQLVAIIVVHAFCNVMGFPDLSFVSPDSD----------LYTYRHSILGVYLVGIVCFSVLLYPVTAP 299
BLAST of EWM27369.1 vs. NCBI_GenBank
Match: gi|298705996|emb|CBJ29117.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 101.293 bits (251), Expect = 2.170e-24 Identity = 53/127 (41.73%), Postives = 76/127 (59.84%), Query Frame = 0
Query: 28 PLILLTPLFFGLAHTHHALQRLRDGVPARIAFLGVCLQIAYTSIFGWHAAFLFLRTGSLLPCVLTHSFCNLMGLPNLAFLLPPPSLLPPPPSSFILHAHRGKILGVYALGIGLFAILLYPCSDPQWY 154
++ L+PL FG AH HH L+ LR G R +G+ QIAYTS+FG AAF+ LRTG L+ +L H CN MG+P++ F + P + +S +L+ HR ++ Y +GI LF L+ P + P Y
Sbjct: 2 KIVWLSPLLFGFAHLHHVLEWLRQGNSVRAVAVGMLFQIAYTSVFGAFAAFVQLRTGHLVSSILVHMLCNFMGVPDITFSIAPGNPGESTRTS-VLYKHRKRLWCCYVVGIFLFGGLIRPLTSPGLY 127
BLAST of EWM27369.1 vs. NCBI_GenBank
Match: gi|669148864|ref|XP_008609994.1| (hypothetical protein SDRG_06018 [Saprolegnia diclina VS20] >gi|530738330|gb|EQC36572.1| hypothetical protein SDRG_06018 [Saprolegnia diclina VS20]) HSP 1 Score: 103.219 bits (256), Expect = 1.191e-23 Identity = 57/126 (45.24%), Postives = 78/126 (61.90%), Query Frame = 0
Query: 27 GPLILLTPLFFGLAHTHHALQRLRDGVPARIAFLGVCLQIAYTSIFGWHAAFLFLRTGSLLPCVLTHSFCNLMGLPNLAFLLPPPSLLPPPPSSFILHAHRGKILGVYALGIGLFAILLYPCSDPQ 152
G +I+ +PL FG+AH HH ++ +R G+P A L V Q+ YT++FG +A FL+LRTG H+FCN+MG P+L FL S+ P L+ R ILGVY LGI F++LLYP +DP
Sbjct: 174 GSIIVGSPLAFGVAHMHHFVEHVRSGMPWTRALLIVVFQLCYTTVFGIYATFLYLRTGQFCALFAVHAFCNVMGFPDLGFL----SIESP------LYGARYAILGVYLLGILGFSVLLYPLTDPS 289
BLAST of EWM27369.1 vs. NCBI_GenBank
Match: gi|1069781609|ref|XP_018328410.1| (PREDICTED: CAAX prenyl protease 2 isoform X2 [Agrilus planipennis]) HSP 1 Score: 98.5969 bits (244), Expect = 8.303e-23 Identity = 48/124 (38.71%), Postives = 75/124 (60.48%), Query Frame = 0
Query: 30 ILLTPLFFGLAHTHHALQRLRDGVPARIAFLGVCLQIAYTSIFGWHAAFLFLRTGSLLPCVLTHSFCNLMGLPNLAFLLPPPSLLPPPPSSFILHAHRGKILGVYALGIGLFAILLYPCSDPQW 153
+ + PLFFG+AH HH ++ +RDG+ + AFL C ++T+IFG ++A+LFLRTG + + H+FCN MG+P+++ LL R I+ V+ LG+ L+ LL P ++PQW
Sbjct: 68 VFVCPLFFGVAHFHHMIELVRDGINFKTAFLMSCFHFSFTTIFGAYSAYLFLRTGHFMSSFIVHAFCNHMGMPDVSELLTYKG------------TQRVVIICVFFLGLVLWCYLLNPLTEPQW 179
BLAST of EWM27369.1 vs. NCBI_GenBank
Match: gi|334347679|ref|XP_003341965.1| (PREDICTED: LOW QUALITY PROTEIN: CAAX prenyl protease 2 [Monodelphis domestica]) HSP 1 Score: 97.0561 bits (240), Expect = 4.498e-21 Identity = 59/131 (45.04%), Postives = 74/131 (56.49%), Query Frame = 0
Query: 26 LGPLILLTPLFFGLAHTHHALQ--RLRDGVPARIAFLGVCLQIAYTSIFGWHAAFLFLRTGSLLPCVLTHSFCNLMGLPNLAFLLPPPSLLPPPPSSFILHAHRGKILGVYALGIGLFAILLYPCSDPQWY 154
LGP I PLFFG+AH HH ++ R R G I FL Q +YT++FG + AFLF+RTG L+ VL HSFCN MG P + L H R +L YALG+GLF +LL P +DP+ Y
Sbjct: 195 LGPAIFTCPLFFGVAHFHHVIEQLRFRQGSVGSI-FLSAAFQFSYTAVFGAYTAFLFVRTGHLIGPVLCHSFCNYMGFPAVCAALE--------------HPQRCPLLLSYALGVGLFMLLLQPLTDPKLY 310
BLAST of EWM27369.1 vs. NCBI_GenBank
Match: gi|426369368|ref|XP_004051664.1| (PREDICTED: CAAX prenyl protease 2 [Gorilla gorilla gorilla]) HSP 1 Score: 96.6709 bits (239), Expect = 6.905e-21 Identity = 57/130 (43.85%), Postives = 73/130 (56.15%), Query Frame = 0
Query: 26 LGPLILLTPLFFGLAHTHHALQRLR-DGVPARIAFLGVCLQIAYTSIFGWHAAFLFLRTGSLLPCVLTHSFCNLMGLPNLAFLLPPPSLLPPPPSSFILHAHRGKILGVYALGIGLFAILLYPCSDPQWY 154
LGP + PLFFG+AH HH +++LR FL Q +YT++FG + AFLF+RTG L+ VL HSFCN MG P + L H R +L YALG+GLF ILL P +DP+ Y
Sbjct: 193 LGPAVFTCPLFFGVAHFHHIIEQLRFRQSSVGNIFLSAAFQFSYTAVFGAYTAFLFIRTGHLIGPVLCHSFCNYMGFPAVCAALE--------------HPQRRPLLAGYALGVGLFLILLQPLTDPKLY 308
BLAST of EWM27369.1 vs. NCBI_GenBank
Match: gi|667321519|ref|XP_008588210.1| (PREDICTED: CAAX prenyl protease 2 isoform X3 [Galeopterus variegatus] >gi|667321521|ref|XP_008588211.1| PREDICTED: CAAX prenyl protease 2 isoform X3 [Galeopterus variegatus]) HSP 1 Score: 83.9593 bits (206), Expect = 8.270e-17 Identity = 55/130 (42.31%), Postives = 73/130 (56.15%), Query Frame = 0
Query: 26 LGPLILLTPLFFGLAHTHHALQRLR-DGVPARIAFLGVCLQIAYTSIFGWHAAFLFLRTGSLLPCVLTHSFCNLMGLPNLAFLLPPPSLLPPPPSSFILHAHRGKILGVYALGIGLFAILLYPCSDPQWY 154
LGP + PLFFG+AH HH +++LR FL Q +YT++FG + AFLF+RTG L+ VL HSFCN MG P + L H R +L YA+G+GLF +LL P +DP+ Y
Sbjct: 89 LGPAVFTCPLFFGVAHFHHIIEQLRFRQSSVGSIFLSAAFQFSYTAVFGAYTAFLFIRTGHLIGPVLCHSFCNYMGFPAVCAALE--------------HPQRRPLLAGYAVGVGLFLLLLQPLTDPKLY 204
BLAST of EWM27369.1 vs. NCBI_GenBank
Match: gi|637367207|ref|XP_008121358.1| (PREDICTED: CAAX prenyl protease 2 isoform X4 [Anolis carolinensis]) HSP 1 Score: 79.7221 bits (195), Expect = 2.961e-15 Identity = 43/89 (48.31%), Postives = 55/89 (61.80%), Query Frame = 0
Query: 26 LGPLILLTPLFFGLAHTHHALQ--RLRDGVPARIAFLGVCLQIAYTSIFGWHAAFLFLRTGSLLPCVLTHSFCNLMGLPNLAFLLPPPS 112
LGP I PLFFG+AH HH ++ R R G A I FL Q +YT++FG + AF+F+RTG L+ VL HSFCN +G P + L P
Sbjct: 89 LGPAIFTCPLFFGVAHFHHVIEQLRFRQGSTASI-FLSAVFQFSYTAVFGAYTAFIFIRTGHLIGPVLCHSFCNYVGFPAMGAALEHPQ 176 The following BLAST results are available for this feature:
BLAST of EWM27369.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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