EWM27369.1, cds3301 (CDS) Nannochloropsis gaditana

Overview
NameEWM27369.1
Unique Namecds3301
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:67602..67763 +
Alignment locationCM002461.1:67953..68019 +
Alignment locationCM002461.1:68150..68421 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27369.1
Productcaax prenyl protease 2
Orig transcript idgnl|cribi|Naga_100216g1.231.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:67602..67763 +
CM002461.1supercontigCM002461.1:67953..68019 +
CM002461.1supercontigCM002461.1:68150..68421 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0019538protein metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR003675CAAX_protease
Homology
BLAST of EWM27369.1 vs. NCBI_GenBank
Match: gi|585109591|gb|EWM27369.1| (caax prenyl protease 2 [Nannochloropsis gaditana])

HSP 1 Score: 324.324 bits (830), Expect = 4.135e-112
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0
Query:    1 MLPILYQAASSPSLSHSRPSSSSPPLGPLILLTPLFFGLAHTHHALQRLRDGVPARIAFLGVCLQIAYTSIFGWHAAFLFLRTGSLLPCVLTHSFCNLMGLPNLAFLLPPPSLLPPPPSSFILHAHRGKILGVYALGIGLFAILLYPCSDPQWYYREEGPRPLYWR 166
            MLPILYQAASSPSLSHSRPSSSSPPLGPLILLTPLFFGLAHTHHALQRLRDGVPARIAFLGVCLQIAYTSIFGWHAAFLFLRTGSLLPCVLTHSFCNLMGLPNLAFLLPPPSLLPPPPSSFILHAHRGKILGVYALGIGLFAILLYPCSDPQWYYREEGPRPLYWR
Sbjct:    1 MLPILYQAASSPSLSHSRPSSSSPPLGPLILLTPLFFGLAHTHHALQRLRDGVPARIAFLGVCLQIAYTSIFGWHAAFLFLRTGSLLPCVLTHSFCNLMGLPNLAFLLPPPSLLPPPPSSFILHAHRGKILGVYALGIGLFAILLYPCSDPQWYYREEGPRPLYWR 166          
BLAST of EWM27369.1 vs. NCBI_GenBank
Match: gi|675891380|ref|XP_009031192.1| (hypothetical protein HELRODRAFT_70936, partial [Helobdella robusta] >gi|555687325|gb|ESN90557.1| hypothetical protein HELRODRAFT_70936, partial [Helobdella robusta])

HSP 1 Score: 105.916 bits (263), Expect = 1.546e-25
Identity = 58/153 (37.91%), Postives = 88/153 (57.52%), Query Frame = 0
Query:    3 PILYQAASSPSLSHSRPSSSSPPLGPLILLTPLFFGLAHTHHALQRLRDGVPARIAFLGVCLQIAYTSIFGWHAAFLFLRTG-SLLPCVLTHSFCNLMGLPNLAFLLPPPSLLPPPPSSFILHAHRGKILGVYALGIGLFAILLYPCSDPQWY 154
             I+Y+A   P+L  +   + S      I+L+PLFFG+AH HH    ++DG+P + A +  C Q  YT++FG ++AF+F+RTG ++LPC+L+H FCN MG PN   +L                + + KI+  Y +G+ LF ILL P + P  Y
Sbjct:   71 EIVYRACMLPTLIPNFGVAKS------IVLSPLFFGMAHFHHVFALVKDGMPLKSALIKACFQFTYTTLFGIYSAFVFVRTGDTILPCILSHMFCNHMGFPNFIEVLQCQD-----------QSMKSKIIFFYVVGLVLFFILLVPLTKPSLY 206          
BLAST of EWM27369.1 vs. NCBI_GenBank
Match: gi|1173949733|gb|OQR97739.1| (peptidase family U48 [Achlya hypogyna])

HSP 1 Score: 108.227 bits (269), Expect = 2.395e-25
Identity = 53/123 (43.09%), Postives = 78/123 (63.41%), Query Frame = 0
Query:   29 LILLTPLFFGLAHTHHALQRLRDGVPARIAFLGVCLQIAYTSIFGWHAAFLFLRTGSLLPCVLTHSFCNLMGLPNLAFLLPPPSLLPPPPSSFILHAHRGKILGVYALGIGLFAILLYPCSDP 151
            ++ L+PL FG+AH HH  + +R G+P   A   V  Q+ YT++FG +A FLFLRTG L+  ++ H+FCN+MG P+L+F+ P             L+ +R  ILGVY +GI  F++LLYP + P
Sbjct:  187 IVFLSPLAFGVAHAHHFYEHVRGGMPWMRALAIVVFQLVYTTVFGIYATFLFLRTGQLVAIIVVHAFCNVMGFPDLSFVSPDSD----------LYTYRHSILGVYLVGIVCFSVLLYPVTAP 299          
BLAST of EWM27369.1 vs. NCBI_GenBank
Match: gi|298705996|emb|CBJ29117.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 101.293 bits (251), Expect = 2.170e-24
Identity = 53/127 (41.73%), Postives = 76/127 (59.84%), Query Frame = 0
Query:   28 PLILLTPLFFGLAHTHHALQRLRDGVPARIAFLGVCLQIAYTSIFGWHAAFLFLRTGSLLPCVLTHSFCNLMGLPNLAFLLPPPSLLPPPPSSFILHAHRGKILGVYALGIGLFAILLYPCSDPQWY 154
             ++ L+PL FG AH HH L+ LR G   R   +G+  QIAYTS+FG  AAF+ LRTG L+  +L H  CN MG+P++ F + P +      +S +L+ HR ++   Y +GI LF  L+ P + P  Y
Sbjct:    2 KIVWLSPLLFGFAHLHHVLEWLRQGNSVRAVAVGMLFQIAYTSVFGAFAAFVQLRTGHLVSSILVHMLCNFMGVPDITFSIAPGNPGESTRTS-VLYKHRKRLWCCYVVGIFLFGGLIRPLTSPGLY 127          
BLAST of EWM27369.1 vs. NCBI_GenBank
Match: gi|669148864|ref|XP_008609994.1| (hypothetical protein SDRG_06018 [Saprolegnia diclina VS20] >gi|530738330|gb|EQC36572.1| hypothetical protein SDRG_06018 [Saprolegnia diclina VS20])

HSP 1 Score: 103.219 bits (256), Expect = 1.191e-23
Identity = 57/126 (45.24%), Postives = 78/126 (61.90%), Query Frame = 0
Query:   27 GPLILLTPLFFGLAHTHHALQRLRDGVPARIAFLGVCLQIAYTSIFGWHAAFLFLRTGSLLPCVLTHSFCNLMGLPNLAFLLPPPSLLPPPPSSFILHAHRGKILGVYALGIGLFAILLYPCSDPQ 152
            G +I+ +PL FG+AH HH ++ +R G+P   A L V  Q+ YT++FG +A FL+LRTG        H+FCN+MG P+L FL    S+  P      L+  R  ILGVY LGI  F++LLYP +DP 
Sbjct:  174 GSIIVGSPLAFGVAHMHHFVEHVRSGMPWTRALLIVVFQLCYTTVFGIYATFLYLRTGQFCALFAVHAFCNVMGFPDLGFL----SIESP------LYGARYAILGVYLLGILGFSVLLYPLTDPS 289          
BLAST of EWM27369.1 vs. NCBI_GenBank
Match: gi|1069781609|ref|XP_018328410.1| (PREDICTED: CAAX prenyl protease 2 isoform X2 [Agrilus planipennis])

HSP 1 Score: 98.5969 bits (244), Expect = 8.303e-23
Identity = 48/124 (38.71%), Postives = 75/124 (60.48%), Query Frame = 0
Query:   30 ILLTPLFFGLAHTHHALQRLRDGVPARIAFLGVCLQIAYTSIFGWHAAFLFLRTGSLLPCVLTHSFCNLMGLPNLAFLLPPPSLLPPPPSSFILHAHRGKILGVYALGIGLFAILLYPCSDPQW 153
            + + PLFFG+AH HH ++ +RDG+  + AFL  C   ++T+IFG ++A+LFLRTG  +   + H+FCN MG+P+++ LL                  R  I+ V+ LG+ L+  LL P ++PQW
Sbjct:   68 VFVCPLFFGVAHFHHMIELVRDGINFKTAFLMSCFHFSFTTIFGAYSAYLFLRTGHFMSSFIVHAFCNHMGMPDVSELLTYKG------------TQRVVIICVFFLGLVLWCYLLNPLTEPQW 179          
BLAST of EWM27369.1 vs. NCBI_GenBank
Match: gi|334347679|ref|XP_003341965.1| (PREDICTED: LOW QUALITY PROTEIN: CAAX prenyl protease 2 [Monodelphis domestica])

HSP 1 Score: 97.0561 bits (240), Expect = 4.498e-21
Identity = 59/131 (45.04%), Postives = 74/131 (56.49%), Query Frame = 0
Query:   26 LGPLILLTPLFFGLAHTHHALQ--RLRDGVPARIAFLGVCLQIAYTSIFGWHAAFLFLRTGSLLPCVLTHSFCNLMGLPNLAFLLPPPSLLPPPPSSFILHAHRGKILGVYALGIGLFAILLYPCSDPQWY 154
            LGP I   PLFFG+AH HH ++  R R G    I FL    Q +YT++FG + AFLF+RTG L+  VL HSFCN MG P +   L               H  R  +L  YALG+GLF +LL P +DP+ Y
Sbjct:  195 LGPAIFTCPLFFGVAHFHHVIEQLRFRQGSVGSI-FLSAAFQFSYTAVFGAYTAFLFVRTGHLIGPVLCHSFCNYMGFPAVCAALE--------------HPQRCPLLLSYALGVGLFMLLLQPLTDPKLY 310          
BLAST of EWM27369.1 vs. NCBI_GenBank
Match: gi|426369368|ref|XP_004051664.1| (PREDICTED: CAAX prenyl protease 2 [Gorilla gorilla gorilla])

HSP 1 Score: 96.6709 bits (239), Expect = 6.905e-21
Identity = 57/130 (43.85%), Postives = 73/130 (56.15%), Query Frame = 0
Query:   26 LGPLILLTPLFFGLAHTHHALQRLR-DGVPARIAFLGVCLQIAYTSIFGWHAAFLFLRTGSLLPCVLTHSFCNLMGLPNLAFLLPPPSLLPPPPSSFILHAHRGKILGVYALGIGLFAILLYPCSDPQWY 154
            LGP +   PLFFG+AH HH +++LR         FL    Q +YT++FG + AFLF+RTG L+  VL HSFCN MG P +   L               H  R  +L  YALG+GLF ILL P +DP+ Y
Sbjct:  193 LGPAVFTCPLFFGVAHFHHIIEQLRFRQSSVGNIFLSAAFQFSYTAVFGAYTAFLFIRTGHLIGPVLCHSFCNYMGFPAVCAALE--------------HPQRRPLLAGYALGVGLFLILLQPLTDPKLY 308          
BLAST of EWM27369.1 vs. NCBI_GenBank
Match: gi|667321519|ref|XP_008588210.1| (PREDICTED: CAAX prenyl protease 2 isoform X3 [Galeopterus variegatus] >gi|667321521|ref|XP_008588211.1| PREDICTED: CAAX prenyl protease 2 isoform X3 [Galeopterus variegatus])

HSP 1 Score: 83.9593 bits (206), Expect = 8.270e-17
Identity = 55/130 (42.31%), Postives = 73/130 (56.15%), Query Frame = 0
Query:   26 LGPLILLTPLFFGLAHTHHALQRLR-DGVPARIAFLGVCLQIAYTSIFGWHAAFLFLRTGSLLPCVLTHSFCNLMGLPNLAFLLPPPSLLPPPPSSFILHAHRGKILGVYALGIGLFAILLYPCSDPQWY 154
            LGP +   PLFFG+AH HH +++LR         FL    Q +YT++FG + AFLF+RTG L+  VL HSFCN MG P +   L               H  R  +L  YA+G+GLF +LL P +DP+ Y
Sbjct:   89 LGPAVFTCPLFFGVAHFHHIIEQLRFRQSSVGSIFLSAAFQFSYTAVFGAYTAFLFIRTGHLIGPVLCHSFCNYMGFPAVCAALE--------------HPQRRPLLAGYAVGVGLFLLLLQPLTDPKLY 204          
BLAST of EWM27369.1 vs. NCBI_GenBank
Match: gi|637367207|ref|XP_008121358.1| (PREDICTED: CAAX prenyl protease 2 isoform X4 [Anolis carolinensis])

HSP 1 Score: 79.7221 bits (195), Expect = 2.961e-15
Identity = 43/89 (48.31%), Postives = 55/89 (61.80%), Query Frame = 0
Query:   26 LGPLILLTPLFFGLAHTHHALQ--RLRDGVPARIAFLGVCLQIAYTSIFGWHAAFLFLRTGSLLPCVLTHSFCNLMGLPNLAFLLPPPS 112
            LGP I   PLFFG+AH HH ++  R R G  A I FL    Q +YT++FG + AF+F+RTG L+  VL HSFCN +G P +   L  P 
Sbjct:   89 LGPAIFTCPLFFGVAHFHHVIEQLRFRQGSTASI-FLSAVFQFSYTAVFGAYTAFIFIRTGHLIGPVLCHSFCNYVGFPAMGAALEHPQ 176          
The following BLAST results are available for this feature:
BLAST of EWM27369.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109591|gb|EWM27369.1|4.135e-112100.00caax prenyl protease 2 [Nannochloropsis gaditana][more]
gi|675891380|ref|XP_009031192.1|1.546e-2537.91hypothetical protein HELRODRAFT_70936, partial [He... [more]
gi|1173949733|gb|OQR97739.1|2.395e-2543.09peptidase family U48 [Achlya hypogyna][more]
gi|298705996|emb|CBJ29117.1|2.170e-2441.73conserved unknown protein [Ectocarpus siliculosus][more]
gi|669148864|ref|XP_008609994.1|1.191e-2345.24hypothetical protein SDRG_06018 [Saprolegnia dicli... [more]
gi|1069781609|ref|XP_018328410.1|8.303e-2338.71PREDICTED: CAAX prenyl protease 2 isoform X2 [Agri... [more]
gi|334347679|ref|XP_003341965.1|4.498e-2145.04PREDICTED: LOW QUALITY PROTEIN: CAAX prenyl protea... [more]
gi|426369368|ref|XP_004051664.1|6.905e-2143.85PREDICTED: CAAX prenyl protease 2 [Gorilla gorilla... [more]
gi|667321519|ref|XP_008588210.1|8.270e-1742.31PREDICTED: CAAX prenyl protease 2 isoform X3 [Gale... [more]
gi|637367207|ref|XP_008121358.1|2.961e-1548.31PREDICTED: CAAX prenyl protease 2 isoform X4 [Anol... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3310rna3310Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications