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Properties
| Property Name | Value |
|---|
| Product | Ovarian tumor, otubain |
| Orig transcript id | gnl|cribi|Naga_100696g1.1601.mrna |
| Orig protein id | gnl|cribi|Naga_100696g1.1601 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:63765..65799 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3308 ID=rna3308|Name=rna3308|organism=Nannochloropsis gaditana|type=mRNA|length=507bp
ATGGGGCCGGTCGATGTTCCAGGGACCATCGCGGGAGCCCCGGGAGGTGC
CTTTGCCATCCAACAGGAAGATTTTCCGGCCCTACCTGGAAGCGAAGGAG
GAGGAGGGCGGGAGGGAGGTGCTGGGGGAGGAGGGGGACAGGTGCAGCAG
GTCCCACGGCAGCAACAACCACAACAACAACAACAACAACAACAACAACC
ACAGCAACAACCACAGCAACAACAACAACAACCTCAGCAACAGCAACAAC
AACAGCAACAGCCGTCGTCAGCTCCCCCTCCCCTTATTGAGGGCGTCAAA
CCCTCCACGTTGCCGCCGCAGCAGCAGAAATCAAGGGGCGGAGAGGCCTA
TGGTCTTCTCGGCCTCCTCTCCGTCATTCGCATGACAGATCCGGACCTCA
ACACCCTAGCCTTAGGGAGCGACCTGACCACCTTGGGGCTCAACCTGAAC
GCCACGGAGGCCCTTTCTTCCTACCCCCCTGCTACAATCTGCAAAAGCAA
TCCCTAA back to topprotein sequence of rna3308 >rna3308-protein ID=rna3308-protein|Name=rna3308|organism=Nannochloropsis gaditana|type=polypeptide|length=261bp
MEQMEASSPEETVDGAETEEEMRKRHKAEVRQLEGKTRALLKKAPKPKKA
DVQGEVARMERDMEERHARELGKFAAAPNGGREAEEEAARALAKEGVVSL
RDLEMGQILSLLSPLGLRVQEVPADGHCLYRAVAHQLEHQGIPSQGYPEV
RRSAAQYILSHPEDFLPFLAGGEEGEGAGLEAYVHTVEDTAEWGGELEIR
ALCHAYQTPIRVYAAEQPVYMIGAEDYDQAKPLLLSYHRHFYALGEHYNS
VVPVEGRVEEG back to topmRNA from alignment at CM002461.1:63765..65799- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3308 ID=rna3308|Name=rna3308|organism=Nannochloropsis gaditana|type=mRNA|length=2035bp|location=Sequence derived from alignment at CM002461.1:63765..65799- (Nannochloropsis gaditana)
ATGGAGCAGATGGAGGCGAGCTCCCCGGAGGAGACGGTGGATGGCGCGGA
GACAGAGGAAGAGATGCGGAAACGTCACAAGGCAGAAGTCCGGGTGAGCG
CATGGGGAGGAGGATATCAATGCCAATGGTTGGCAGGGTTTGGAAAACCG
ACATTTGGAAGGGAAAATGGATAATGGAAACCGGGAAAGAAAAAAAGTCT
GACCGATTTCCTCGGCGTTATCCGGCTTTCCTAGCAATTGGAAGGGAAGA
CAAGGGCCCTCTTAAAGAAAGCCCCAAAGCCCAAAAAGGCAGATGTGCAA
GGTGAAGTGGCTAGGATGGAGCGGGACATGGAAGAACGTCACGCACGGGA
ACTGGGAAAATTCGCAGCGGCACCGAATGGCGGGAGGTAAGGTGGGAGCA
GGTATAGGTACAGGGGTTGAGAATAAAGAAAGTGCACTGGTCTTTCGCTC
TTGTGAGCTGCTTTGGTTCCTCTCACCGTGATTAACCGGCCTGAAATTGC
ATCTACCTCTAGAAATGAAGGAGGAAATGGCGGGGGTTCGGGCAGTAAGG
AAGTGAGATTCGCGCCCTTGACCTCTGGGTCGAAAAATGGGCGCCAGGAG
GAAGGAGAAGGAAGGGGGAAGGGAGAAGAAGGGGAGAGTGAGGAAGAAGA
GGATGGCGGGGCCACAGCTGCTGAAAAAGTGGCGCGAAAACGCGACAAGG
CGAGACGGAAGAAGGAGCGAAAGGCGGAAAGGTAGGAAAGGAGGGAGGGA
GGGCGGGAGGGAAGGGGCGATGGATGGTAGGTACTGTTCTTCGCGCATTT
CCTGAGCCGAGACGTCTCTGCGCCCGCAGAGAAGCAGAGGAGGAGGCTGC
CCGGGCGCTTGCCAAGGAAGGCGTCGTCTCTCTGCGAGACCTGGAGATGG
GCCAGATCCTCTCCCTTCTCTCCCCCCTTGGCCTCCGCGTCCAGGAAGTC
CCCGCCGACGGCCACTGTCTCTACCGTGCCGTTGCACACCAGGTGCGTGC
CTCCTTCCTCTTTTTTTGTTTCCTCTTATTTCATTCCACGCTCGATTCCT
CCGTCTCCCTTTTTGGACACGGCAACGCAAATAGATCCCGGTCGCCTACC
CCCCCCTTACGACCAGCGCTTTCTCCCTCCCCACCTCCCGCCCACCTTGG
CTGTCCTTTTCCCCTTCTCCCTCCTCCCTCCCACGCAGCTTGAGCACCAG
GGTATTCCCTCGCAGGGCTACCCGGAAGTACGACGATCCGCCGCTCAATA
CATCCTGTCCCACCCTGAGGATTTCCTCCCTTTCCTAGCAGGAGGGGAGG
AAGGGGAGGGAGCGGGCTTGGAGGCGTACGTGCATACGGTGGAGGACACG
GCGGAGTGGGGTGGGGAGCTGGAGATACGGGCGCTGGTGAGGAAGGGGTG
GGAGGAAGGGAGTGTGGGAGGGAGGGAGGGAGGGAGTCAGGGCCGTACGG
AAGGAAAGTGAGACGAACGCGCGACCTTGGTCCCGGGCTGATCCCCCTTG
TCGCGGCTCAATCAGCTCCTCCTTCCTCCTTTCCCTCCCTCCTCTCCAAG
TGCCACGCGTACCAGACACCCATTCGGGTGTATGCTGCGGAGCAACCCGT
CTACATGATCGGGGCAGAGGACTACGACCAGGCCAAGCCCCTCCTCTTGT
CCTACCACAGGCATTTTTACGCGTTGGGCGAGCACTATAATAGCGTGGTC
CCAGTGGAGGGACGGGTGGAGGAGGGCTGAACTAGAAAAGAAACGGTCGT
AAGGGCGGGCGGATAAATTTTAGTTTGGCCGGAGGGAAGACGCACCTCTT
TGAGGCTCCCACCCTGGACATTTCTGTTTTTTGTTTGCCTAGATTTTAAA
GCTCACTTTCTCTGTTCCACCTCCTGTCTATTCTGCTGCCTCCTCCTCCT
CCAATTTTAGCTCGGCAAATCCGAGGGATGCTACATAAGGAAGAAAAACA
GGACATGTCGACATAGGCATGGGCCCAACTTGTGTCACGGCATCATTTTT
CCCCTTCCCTTTGCTTTTGCTTCTCAAATAAGCGC back to topCoding sequence (CDS) from alignment at CM002461.1:63765..65799- >rna3308 ID=rna3308|Name=rna3308|organism=Nannochloropsis gaditana|type=CDS|length=3930bp|location=Sequence derived from alignment at CM002461.1:63765..65799- (Nannochloropsis gaditana)
TGCCACGCGTACCAGACACCCATTCGGGTGTATGCTGCGGAGCAACCCGT
CTACATGATCGGGGCAGAGGACTACGACCAGGCCAAGCCCCTCCTCTTGT
CCTACCACAGGCATTTTTACGCGTTGGGCGAGCACTATAATAGCGTGGTC
CCAGTGGAGGGACGGGTGGAGGAGGGCTGACTTGAGCACCAGGGTATTCC
CTCGCAGGGCTACCCGGAAGTACGACGATCCGCCGCTCAATACATCCTGT
CCCACCCTGAGGATTTCCTCCCTTTCCTAGCAGGAGGGGAGGAAGGGGAG
GGAGCGGGCTTGGAGGCGTACGTGCATACGGTGGAGGACACGGCGGAGTG
GGGTGGGGAGCTGGAGATACGGGCGCTGAGAAGCAGAGGAGGAGGCTGCC
CGGGCGCTTGCCAAGGAAGGCGTCGTCTCTCTGCGAGACCTGGAGATGGG
CCAGATCCTCTCCCTTCTCTCCCCCCTTGGCCTCCGCGTCCAGGAAGTCC
CCGCCGACGGCCACTGTCTCTACCGTGCCGTTGCACACCAGCAATTGGAA
GGGAAGACAAGGGCCCTCTTAAAGAAAGCCCCAAAGCCCAAAAAGGCAGA
TGTGCAAGGTGAAGTGGCTAGGATGGAGCGGGACATGGAAGAACGTCACG
CACGGGAACTGGGAAAATTCGCAGCGGCACCGAATGGCGGGAGATGGAGC
AGATGGAGGCGAGCTCCCCGGAGGAGACGGTGGATGGCGCGGAGACAGAG
GAAGAGATGCGGAAACGTCACAAGGCAGAAGTCCGGTGCCACGCGTACCA
GACACCCATTCGGGTGTATGCTGCGGAGCAACCCGTCTACATGATCGGGG
CAGAGGACTACGACCAGGCCAAGCCCCTCCTCTTGTCCTACCACAGGCAT
TTTTACGCGTTGGGCGAGCACTATAATAGCGTGGTCCCAGTGGAGGGACG
GGTGGAGGAGGGCTGACTTGAGCACCAGGGTATTCCCTCGCAGGGCTACC
CGGAAGTACGACGATCCGCCGCTCAATACATCCTGTCCCACCCTGAGGAT
TTCCTCCCTTTCCTAGCAGGAGGGGAGGAAGGGGAGGGAGCGGGCTTGGA
GGCGTACGTGCATACGGTGGAGGACACGGCGGAGTGGGGTGGGGAGCTGG
AGATACGGGCGCTGAGAAGCAGAGGAGGAGGCTGCCCGGGCGCTTGCCAA
GGAAGGCGTCGTCTCTCTGCGAGACCTGGAGATGGGCCAGATCCTCTCCC
TTCTCTCCCCCCTTGGCCTCCGCGTCCAGGAAGTCCCCGCCGACGGCCAC
TGTCTCTACCGTGCCGTTGCACACCAGCAATTGGAAGGGAAGACAAGGGC
CCTCTTAAAGAAAGCCCCAAAGCCCAAAAAGGCAGATGTGCAAGGTGAAG
TGGCTAGGATGGAGCGGGACATGGAAGAACGTCACGCACGGGAACTGGGA
AAATTCGCAGCGGCACCGAATGGCGGGAGATGGAGCAGATGGAGGCGAGC
TCCCCGGAGGAGACGGTGGATGGCGCGGAGACAGAGGAAGAGATGCGGAA
ACGTCACAAGGCAGAAGTCCGGTGCCACGCGTACCAGACACCCATTCGGG
TGTATGCTGCGGAGCAACCCGTCTACATGATCGGGGCAGAGGACTACGAC
CAGGCCAAGCCCCTCCTCTTGTCCTACCACAGGCATTTTTACGCGTTGGG
CGAGCACTATAATAGCGTGGTCCCAGTGGAGGGACGGGTGGAGGAGGGCT
GACTTGAGCACCAGGGTATTCCCTCGCAGGGCTACCCGGAAGTACGACGA
TCCGCCGCTCAATACATCCTGTCCCACCCTGAGGATTTCCTCCCTTTCCT
AGCAGGAGGGGAGGAAGGGGAGGGAGCGGGCTTGGAGGCGTACGTGCATA
CGGTGGAGGACACGGCGGAGTGGGGTGGGGAGCTGGAGATACGGGCGCTG
AGAAGCAGAGGAGGAGGCTGCCCGGGCGCTTGCCAAGGAAGGCGTCGTCT
CTCTGCGAGACCTGGAGATGGGCCAGATCCTCTCCCTTCTCTCCCCCCTT
GGCCTCCGCGTCCAGGAAGTCCCCGCCGACGGCCACTGTCTCTACCGTGC
CGTTGCACACCAGCAATTGGAAGGGAAGACAAGGGCCCTCTTAAAGAAAG
CCCCAAAGCCCAAAAAGGCAGATGTGCAAGGTGAAGTGGCTAGGATGGAG
CGGGACATGGAAGAACGTCACGCACGGGAACTGGGAAAATTCGCAGCGGC
ACCGAATGGCGGGAGATGGAGCAGATGGAGGCGAGCTCCCCGGAGGAGAC
GGTGGATGGCGCGGAGACAGAGGAAGAGATGCGGAAACGTCACAAGGCAG
AAGTCCGGTGCCACGCGTACCAGACACCCATTCGGGTGTATGCTGCGGAG
CAACCCGTCTACATGATCGGGGCAGAGGACTACGACCAGGCCAAGCCCCT
CCTCTTGTCCTACCACAGGCATTTTTACGCGTTGGGCGAGCACTATAATA
GCGTGGTCCCAGTGGAGGGACGGGTGGAGGAGGGCTGACTTGAGCACCAG
GGTATTCCCTCGCAGGGCTACCCGGAAGTACGACGATCCGCCGCTCAATA
CATCCTGTCCCACCCTGAGGATTTCCTCCCTTTCCTAGCAGGAGGGGAGG
AAGGGGAGGGAGCGGGCTTGGAGGCGTACGTGCATACGGTGGAGGACACG
GCGGAGTGGGGTGGGGAGCTGGAGATACGGGCGCTGAGAAGCAGAGGAGG
AGGCTGCCCGGGCGCTTGCCAAGGAAGGCGTCGTCTCTCTGCGAGACCTG
GAGATGGGCCAGATCCTCTCCCTTCTCTCCCCCCTTGGCCTCCGCGTCCA
GGAAGTCCCCGCCGACGGCCACTGTCTCTACCGTGCCGTTGCACACCAGC
AATTGGAAGGGAAGACAAGGGCCCTCTTAAAGAAAGCCCCAAAGCCCAAA
AAGGCAGATGTGCAAGGTGAAGTGGCTAGGATGGAGCGGGACATGGAAGA
ACGTCACGCACGGGAACTGGGAAAATTCGCAGCGGCACCGAATGGCGGGA
GATGGAGCAGATGGAGGCGAGCTCCCCGGAGGAGACGGTGGATGGCGCGG
AGACAGAGGAAGAGATGCGGAAACGTCACAAGGCAGAAGTCCGGTGCCAC
GCGTACCAGACACCCATTCGGGTGTATGCTGCGGAGCAACCCGTCTACAT
GATCGGGGCAGAGGACTACGACCAGGCCAAGCCCCTCCTCTTGTCCTACC
ACAGGCATTTTTACGCGTTGGGCGAGCACTATAATAGCGTGGTCCCAGTG
GAGGGACGGGTGGAGGAGGGCTGACTTGAGCACCAGGGTATTCCCTCGCA
GGGCTACCCGGAAGTACGACGATCCGCCGCTCAATACATCCTGTCCCACC
CTGAGGATTTCCTCCCTTTCCTAGCAGGAGGGGAGGAAGGGGAGGGAGCG
GGCTTGGAGGCGTACGTGCATACGGTGGAGGACACGGCGGAGTGGGGTGG
GGAGCTGGAGATACGGGCGCTGAGAAGCAGAGGAGGAGGCTGCCCGGGCG
CTTGCCAAGGAAGGCGTCGTCTCTCTGCGAGACCTGGAGATGGGCCAGAT
CCTCTCCCTTCTCTCCCCCCTTGGCCTCCGCGTCCAGGAAGTCCCCGCCG
ACGGCCACTGTCTCTACCGTGCCGTTGCACACCAGCAATTGGAAGGGAAG
ACAAGGGCCCTCTTAAAGAAAGCCCCAAAGCCCAAAAAGGCAGATGTGCA
AGGTGAAGTGGCTAGGATGGAGCGGGACATGGAAGAACGTCACGCACGGG
AACTGGGAAAATTCGCAGCGGCACCGAATGGCGGGAGATGGAGCAGATGG
AGGCGAGCTCCCCGGAGGAGACGGTGGATGGCGCGGAGACAGAGGAAGAG
ATGCGGAAACGTCACAAGGCAGAAGTCCGG back to top
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