EWM27374.1, cds3299 (CDS) Nannochloropsis gaditana

Overview
NameEWM27374.1
Unique Namecds3299
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:65707..65799 -
Alignment locationCM002461.1:65414..65565 -
Alignment locationCM002461.1:64808..64970 -
Alignment locationCM002461.1:64414..64611 -
Alignment locationCM002461.1:64070..64249 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27374.1
ProductOvarian tumor, otubain
Orig transcript idgnl|cribi|Naga_100696g1.1601.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:65707..65799 -
CM002461.1supercontigCM002461.1:65414..65565 -
CM002461.1supercontigCM002461.1:64808..64970 -
CM002461.1supercontigCM002461.1:64414..64611 -
CM002461.1supercontigCM002461.1:64070..64249 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR003323OTU_dom
Homology
BLAST of EWM27374.1 vs. NCBI_GenBank
Match: gi|585109597|gb|EWM27374.1| (Ovarian tumor, otubain [Nannochloropsis gaditana])

HSP 1 Score: 523.857 bits (1348), Expect = 0.000e+0
Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0
Query:    1 MEQMEASSPEETVDGAETEEEMRKRHKAEVRQLEGKTRALLKKAPKPKKADVQGEVARMERDMEERHARELGKFAAAPNGGREAEEEAARALAKEGVVSLRDLEMGQILSLLSPLGLRVQEVPADGHCLYRAVAHQLEHQGIPSQGYPEVRRSAAQYILSHPEDFLPFLAGGEEGEGAGLEAYVHTVEDTAEWGGELEIRALCHAYQTPIRVYAAEQPVYMIGAEDYDQAKPLLLSYHRHFYALGEHYNSVVPVEGRVEEG 261
            MEQMEASSPEETVDGAETEEEMRKRHKAEVRQLEGKTRALLKKAPKPKKADVQGEVARMERDMEERHARELGKFAAAPNGGREAEEEAARALAKEGVVSLRDLEMGQILSLLSPLGLRVQEVPADGHCLYRAVAHQLEHQGIPSQGYPEVRRSAAQYILSHPEDFLPFLAGGEEGEGAGLEAYVHTVEDTAEWGGELEIRALCHAYQTPIRVYAAEQPVYMIGAEDYDQAKPLLLSYHRHFYALGEHYNSVVPVEGRVEEG
Sbjct:    1 MEQMEASSPEETVDGAETEEEMRKRHKAEVRQLEGKTRALLKKAPKPKKADVQGEVARMERDMEERHARELGKFAAAPNGGREAEEEAARALAKEGVVSLRDLEMGQILSLLSPLGLRVQEVPADGHCLYRAVAHQLEHQGIPSQGYPEVRRSAAQYILSHPEDFLPFLAGGEEGEGAGLEAYVHTVEDTAEWGGELEIRALCHAYQTPIRVYAAEQPVYMIGAEDYDQAKPLLLSYHRHFYALGEHYNSVVPVEGRVEEG 261          
BLAST of EWM27374.1 vs. NCBI_GenBank
Match: gi|553187555|ref|XP_005854635.1| (otu domain-containing protein 6b [Nannochloropsis gaditana CCMP526] >gi|422294422|gb|EKU21722.1| otu domain-containing protein 6b [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 290.041 bits (741), Expect = 1.252e-95
Identity = 192/242 (79.34%), Postives = 193/242 (79.75%), Query Frame = 0
Query:    1 MEQMEASSPEETVDGAETEEEMRKRHKAEVRQLEGKTRALLKKAPKPKKADVQGEVARMERDMEERHARELGKFAAAPNGGREAEEEAAR-------ALAKE--------------------------------GVVSLRDLEMGQILSLLSPLGLRVQEVPADGHCLYRAVAHQLEHQGIPSQGYPEVRRSAAQYILSHPEDFLPFLAGGEEGEGAGLEAYVHTVEDTAEWGGELEIRALC 203
            MEQMEASSPEETVDGAETEEEMRKRHKAEVRQLEGKTRALLKKAPKPKKA+VQGEVARMERDMEERHARELGKFAAAPNGGR   EE          A A E                                GVVSLRDLEMGQILSLLSPLGLRVQEVPADGHCLYRAVAHQLEHQGIPSQGYPEVRRSAAQYILSHPEDFLPFLAGGEEGE AGLEAYVHTVEDTAEWGGELEIRAL 
Sbjct:    1 MEQMEASSPEETVDGAETEEEMRKRHKAEVRQLEGKTRALLKKAPKPKKAEVQGEVARMERDMEERHARELGKFAAAPNGGRGKGEEGESEEEEDGGATAAEKVARKRDKARRKKERKAEREAEEEAARALAKEGVVSLRDLEMGQILSLLSPLGLRVQEVPADGHCLYRAVAHQLEHQGIPSQGYPEVRRSAAQYILSHPEDFLPFLAGGEEGEAAGLEAYVHTVEDTAEWGGELEIRALA 242          
BLAST of EWM27374.1 vs. NCBI_GenBank
Match: gi|301105567|ref|XP_002901867.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262099205|gb|EEY57257.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 177.948 bits (450), Expect = 4.159e-51
Identity = 100/286 (34.97%), Postives = 155/286 (54.20%), Query Frame = 0
Query:   17 ETEEEMRKRHKAEVRQLEGKTRALLKKAPKPK--KADVQGEVARMERDMEERHARELGKFAAAPNGGREAEEEAA------------------------------------RALAKEGVVSLRDLEMGQILSLLSPLGLRVQEVPADGHCLYRAVAHQLEHQGIPS----QGYPEVRRSAAQYILSHPEDFLPFLAGGEEGEG--AGLEAYVHTVEDTAEWGGELEIRALCHAYQTPIRVYAAEQPVYMIG----AEDYDQAKPLLLSYHRHFYALGEHYNSVVPV 254
            ET  + ++RHK E+R ++   +A  KKA K +  K D++ +VA ME  +++RH +EL  F    +    A+ +A                                        A +  VS R +E   IL+ LS  GL+++++P+DGHC+Y AVA Q++ + +PS     G+  +R+  ++Y+L+HP+DFLPF+A  E         E Y   + +TA+WGG+LE+RAL  A  TPI V++AE  V ++G    +ED + A  L L+YH H+Y LGEH+NSV PV
Sbjct:    6 ETLGQAKQRHKLELRTMQNDIKAFQKKAKKDRLSKKDIETQVATMEDAVKDRHEQELKSFNTEEDDVDAAQPDAVPGQPGSTVLSKQAKAQAKAQRKREVKKQQERERHERIEEANKNTVSERQIEADMILAQLSRHGLKIKDIPSDGHCMYHAVADQMKQKNLPSAIEMAGFQYLRKLTSEYMLAHPDDFLPFMALDESSASPEDAFETYCDRLANTADWGGQLELRALACALHTPIEVFSAEGDVLVMGGEFVSEDDESAPKLQLTYHLHYYTLGEHFNSVAPV 291          
BLAST of EWM27374.1 vs. NCBI_GenBank
Match: gi|1214708156|gb|OWZ19470.1| (OTU ovarian tumor-like cysteine protease [Phytophthora megakarya])

HSP 1 Score: 173.326 bits (438), Expect = 2.688e-49
Identity = 101/286 (35.31%), Postives = 151/286 (52.80%), Query Frame = 0
Query:   17 ETEEEMRKRHKAEVRQLEGKTRALLKKAPKPK--KADVQGEVARMERDMEERHARELGKFAAAPNGGREAEEEAARAL------------------------------------AKEGVVSLRDLEMGQILSLLSPLGLRVQEVPADGHCLYRAVAHQLEHQGIP----SQGYPEVRRSAAQYILSHPEDFLPFLAGGEEGEGA--GLEAYVHTVEDTAEWGGELEIRALCHAYQTPIRVYAAEQPVYMIGA----EDYDQAKPLLLSYHRHFYALGEHYNSVVPV 254
            ET  + ++RHK E+R L+ + +A  KKA K +  K D + +VA ME  M+ERH +EL  F    +   E   +A  A                                     A +  VS R +E   IL+ LS  GL+++++ +DGHC+Y AVA Q++ + +P      G+  +RR  ++Y+L+HP+DFLPF+A  E  +        Y   V +TA+WGG+LE+RAL  A +TPI V++AE  V ++G     ED + A  L L+YH H+Y LGEH+NSV   
Sbjct:    6 ETLGQTKQRHKLELRTLQTEVKAFQKKAKKDRLSKKDTETQVAVMENAMKERHDQELLAFETMTDDVPETRTDAFSATPDTAAFSKQAKAQAKAQRKREAKKQQERERRERIEEANKNTVSERQIEADMILAQLSRHGLQIKDIASDGHCMYHAVADQMKQKNLPIADDMTGFQYLRRLTSEYMLAHPDDFLPFMALDEASDSLEDAFANYCDRVANTADWGGQLELRALACALRTPIEVFSAEGDVLVMGGEFVNEDDESAPKLQLTYHLHYYTLGEHFNSVTTC 291          
BLAST of EWM27374.1 vs. NCBI_GenBank
Match: gi|675165385|ref|XP_008891577.1| (hypothetical protein PPTG_02273 [Phytophthora parasitica INRA-310] >gi|566027371|gb|ETI50282.1| hypothetical protein F443_06136 [Phytophthora parasitica P1569] >gi|567964674|gb|ETK90157.1| hypothetical protein L915_06017 [Phytophthora parasitica] >gi|568053037|gb|ETM49890.1| hypothetical protein L914_05960 [Phytophthora parasitica] >gi|568107678|gb|ETN22302.1| hypothetical protein PPTG_02273 [Phytophthora parasitica INRA-310] >gi|570954790|gb|ETP20047.1| hypothetical protein F441_06147 [Phytophthora parasitica CJ01A1] >gi|570989880|gb|ETP48007.1| hypothetical protein F442_06173 [Phytophthora parasitica P10297])

HSP 1 Score: 169.859 bits (429), Expect = 5.611e-48
Identity = 97/281 (34.52%), Postives = 149/281 (53.02%), Query Frame = 0
Query:   17 ETEEEMRKRHKAEVRQLEGKTRALLKKAPKPK--KADVQGEVARMERDMEERHARELGKFAAAPNGGR----------------------------EAEEE------AARALAKEGVVSLRDLEMGQILSLLSPLGLRVQEVPADGHCLYRAVAHQLEHQGIP----SQGYPEVRRSAAQYILSHPEDFLPFLAGGEEGEG--AGLEAYVHTVEDTAEWGGELEIRALCHAYQTPIRVYAAEQPVYMIGAEDYDQAKP-LLLSYHRHFYALGEHYNSVVPV 254
            ET  + ++RHK E+R L+   +A  KKA K +  K D++ +V  ME  ++ERH  EL  F    +                               EA+++           A +  VS R +E   IL+ L+  GL+++++P+DGHC+Y AVA Q++   +P      G+  +R+  ++Y+L+HP DFLPF+A  E           Y   + +TA+WGG+LE+RAL  A QTPI V++A   V ++G E  + + P L L+YH H+Y LGEH+NSV PV
Sbjct:    6 ETLGQTKQRHKLELRTLQNDVKAFQKKAKKDRMSKKDIEAQVLAMENAVKERHDAELKAFKTEEDEAETPAAAPAEPEAAVPSKQAKAQAKAQRKREAKKQQERERRERIEEANKNTVSERQIEADMILAQLARQGLKIKDIPSDGHCMYHAVADQMKQMNMPIADEVAGFQYLRKLTSEYMLAHPNDFLPFIAVDESSANPEDAFVTYCDRLANTADWGGQLELRALACALQTPIEVFSAHGDVLVMGDEFVNDSAPKLQLTYHLHYYTLGEHFNSVTPV 286          
BLAST of EWM27374.1 vs. NCBI_GenBank
Match: gi|567993388|gb|ETL43567.1| (hypothetical protein L916_05950 [Phytophthora parasitica] >gi|570331116|gb|ETO79064.1| hypothetical protein F444_06198 [Phytophthora parasitica P1976])

HSP 1 Score: 169.474 bits (428), Expect = 5.921e-48
Identity = 98/281 (34.88%), Postives = 150/281 (53.38%), Query Frame = 0
Query:   17 ETEEEMRKRHKAEVRQLEGKTRALLKKAPKPK--KADVQGEVARMERDMEERHARELGKFAAAPN----------------------------GGREAEEE------AARALAKEGVVSLRDLEMGQILSLLSPLGLRVQEVPADGHCLYRAVAHQLEHQGIP----SQGYPEVRRSAAQYILSHPEDFLPFLAGGEEGEG--AGLEAYVHTVEDTAEWGGELEIRALCHAYQTPIRVYAAEQPVYMIGAEDYDQAKP-LLLSYHRHFYALGEHYNSVVPV 254
            ET  + ++RHK E+R L+   +A  KKA K +  K D++ +V  ME  ++ERH  EL  F    +                              REA+++           A +  VS R +E   IL+ L+  GL+++++P+DGHC+Y AVA Q++   +P      G+  +R+  ++Y+L+HP DFLPF+A  E           Y   + +TA+WGG+LE+RAL  A QTPI V++A   V ++G E  + + P L L+YH H+Y LGEH+NSV PV
Sbjct:    6 ETLGQTKQRHKLELRTLQNDVKAFQKKAKKDRMSKKDIEAQVLAMENAVKERHDAELKAFKTEEDETDTPAAAPAEPEAAVPSKQAKAQAKAQRKREAKKQQERERRERIEEANKNTVSERQIEADMILAQLARQGLKIKDIPSDGHCMYHAVADQMKQMNMPIADEVAGFQYLRKLTSEYMLAHPNDFLPFIAVDESSANPEDAFVTYCDRLANTADWGGQLELRALACALQTPIEVFSAHGDVLVMGDEFVNDSAPKLQLTYHLHYYTLGEHFNSVTPV 286          
BLAST of EWM27374.1 vs. NCBI_GenBank
Match: gi|568022676|gb|ETL96740.1| (hypothetical protein L917_05839 [Phytophthora parasitica])

HSP 1 Score: 169.474 bits (428), Expect = 6.665e-48
Identity = 98/281 (34.88%), Postives = 150/281 (53.38%), Query Frame = 0
Query:   17 ETEEEMRKRHKAEVRQLEGKTRALLKKAPKPK--KADVQGEVARMERDMEERHARELGKFAAAPN----------------------------GGREAEEE------AARALAKEGVVSLRDLEMGQILSLLSPLGLRVQEVPADGHCLYRAVAHQLEHQGIP----SQGYPEVRRSAAQYILSHPEDFLPFLAGGEEGEG--AGLEAYVHTVEDTAEWGGELEIRALCHAYQTPIRVYAAEQPVYMIGAEDYDQAKP-LLLSYHRHFYALGEHYNSVVPV 254
            ET  + ++RHK E+R L+   +A  KKA K +  K D++ +V  ME  ++ERH  EL  F    +                              REA+++           A +  VS R +E   IL+ L+  GL+++++P+DGHC+Y AVA Q++   +P      G+  +R+  ++Y+L+HP DFLPF+A  E           Y   + +TA+WGG+LE+RAL  A QTPI V++A   V ++G E  + + P L L+YH H+Y LGEH+NSV PV
Sbjct:    6 ETLGQTKQRHKLELRTLQNDVKAFQKKAKKDRMSKKDIEAQVLAMENAVKERHDAELKAFKTEEDETDTPAAAPAEPEAAVPSKQAKAQAKAQRKREAKKQQERERRERIEEANKNTVSERQIEADMILAQLARQGLKIKDIPSDGHCMYHAVADQMKQMNMPIANEVAGFQYLRKLTSEYMLAHPNDFLPFIAVDESSANPEDAFVTYCDRLANTADWGGQLELRALACALQTPIEVFSAHGDVLVMGDEFVNDSAPKLQLTYHLHYYTLGEHFNSVTPV 286          
BLAST of EWM27374.1 vs. NCBI_GenBank
Match: gi|695389536|ref|XP_009519463.1| (OTU ovarian tumor-like cysteine protease [Phytophthora sojae] >gi|348684360|gb|EGZ24175.1| OTU ovarian tumor-like cysteine protease [Phytophthora sojae])

HSP 1 Score: 167.933 bits (424), Expect = 3.440e-47
Identity = 99/287 (34.49%), Postives = 151/287 (52.61%), Query Frame = 0
Query:   16 AETEEEMRKRHKAEVRQLEGKTRALLKKAPKPK--KADVQGEVARMERDMEERHARELGKF------------------------------AAAPNGGREAEEE------AARALAKEGVVSLRDLEMGQILSLLSPLGLRVQEVPADGHCLYRAVAHQLEHQGIP----SQGYPEVRRSAAQYILSHPEDFLPFLAGGEEGEG--AGLEAYVHTVEDTAEWGGELEIRALCHAYQTPIRVYAAEQPVYMIGA----EDYDQAKPLLLSYHRHFYALGEHYNSVVPV 254
             ET  + ++RHK E+R L+   +A  KKA K +  K D++ +VA ME  ++ERH +EL  F                               A     REA+++           A +  VS R +E   I + L+  GL+++++P+DGHC+Y AVA Q++ + +P      G+  +R+  + Y+L+H +DFLPF+A  E           Y   V +TA+WGG+LE+RAL  A +TPI V++AE  V ++G     ED   A  L L+YH H+Y LGEH+NSV P+
Sbjct:    5 TETLGQTKQRHKLELRNLQNDVKAFQKKAKKDRLSKKDIETQVAAMESALKERHKQELKAFETETDDQDAADSSPAPAEAEAETETAVPSKQAKAQRKREAKKQQERERRERIEEANKNTVSERQIEADVIAAQLARHGLQIKDIPSDGHCMYHAVADQMKQKNLPIGDVVAGFQYLRKLTSDYMLAHEDDFLPFMALDEAAASPEEAFATYCDRVANTADWGGQLELRALACALRTPIEVFSAEGDVLVMGGEFLNEDDGNATKLQLTYHLHYYTLGEHFNSVTPM 291          
BLAST of EWM27374.1 vs. NCBI_GenBank
Match: gi|970629174|gb|KUF76504.1| (OTU domain-containing protein 6B [Phytophthora nicotianae])

HSP 1 Score: 167.162 bits (422), Expect = 6.112e-47
Identity = 97/281 (34.52%), Postives = 148/281 (52.67%), Query Frame = 0
Query:   17 ETEEEMRKRHKAEVRQLEGKTRALLKKAPKPK--KADVQGEVARMERDMEERHARELGKFAAAPNGGR----------------------------EAEEE------AARALAKEGVVSLRDLEMGQILSLLSPLGLRVQEVPADGHCLYRAVAHQLEHQGIP----SQGYPEVRRSAAQYILSHPEDFLPFLAGGEEGEG--AGLEAYVHTVEDTAEWGGELEIRALCHAYQTPIRVYAAEQPVYMIGAEDYDQAKP-LLLSYHRHFYALGEHYNSVVPV 254
            ET  + ++RHK E+R L+   +A  KKA K +  K D++ +V  ME  ++ERH  EL  F    +                               EA+++           A +  VS R +E   IL+ L+  GL+++++P+DGHC+Y AVA Q++   +P      G   +R+  ++Y+L+HP DFLPF+A  E           Y   + +TA+WGG+LE+RAL  A QTPI V++A   V ++G E  + + P L L+YH H+Y LGEH+NSV PV
Sbjct:    6 ETLGQTKQRHKLELRTLQNDVKAFQKKAKKDRMSKKDIEAQVLAMENAVKERHDAELKAFKTEEDEADTPAAAPAEPEAAVPSKQAKAQAKAQRKREAKKQQERERRERIEEANKNTVSERQIEADMILAQLARQGLKIKDIPSDGHCMYHAVADQMKQMNMPIADEVAGXQYLRKLTSEYMLAHPNDFLPFIAVDESSANPEDAFVTYCDRLANTADWGGQLELRALACALQTPIEVFSAHGDVLVMGDEFVNDSAPKLQLTYHLHYYTLGEHFNSVTPV 286          
BLAST of EWM27374.1 vs. NCBI_GenBank
Match: gi|1183344695|gb|ORX73561.1| (OTU-domain-containing protein [Linderina pennispora])

HSP 1 Score: 166.007 bits (419), Expect = 7.985e-47
Identity = 106/257 (41.25%), Postives = 134/257 (52.14%), Query Frame = 0
Query:   18 TEEEMRKRHKAEVRQLEGKTRALLKKAPK---PKKADVQGEVARMERDMEERHARELGKF----AAAPNGG-------------REAEEEAARALAKEGVVSLRDLEMGQILSLLSPLGLRVQEVPADGHCLYRAVAHQLE-HQGIPSQGYPEVRRSAAQYILSHPEDFLPFLA--GGEEGEGAGLEAYVHTVEDTAEWGGELEIRALCHAYQTPIRVYAAEQPVYMIGAEDYDQAKPLLLSYHRHFYALGEHYNSV 251
            T EE+  RH+ E ++L  K  +L K  PK    KK +V  E+A +E  + ERH  EL +     AAAP                R  +EEA R    EG V L  +E   I  L     L V ++ ADGHCLY A A QL  +    +  Y ++R  AAQY+ SH +DFLPF+A   G+       E Y   +E TAEWGG+ EI AL HA + P+ VY    PV  IG E Y    P+ LSYHRH Y LGEHYNS+
Sbjct:    7 TIEELETRHRKETKELTSKVMSLKKSIPKGDKRKKKEVTAEIAVLEAQLAERHDAELAELKQALAAAPTTDEAKQRQQKRQEEMRRMQEEAERE--AEGQVDLGQVESAAIDKLAERDCLLVHQIKADGHCLYSAFADQLNTYHNADALDYADMREKAAQYMRSHRDDFLPFMARDDGDMFSEMDFEEYCDKIEKTAEWGGQQEITALAHALEVPVHVYQMGAPVLKIGDELYQPKSPVTLSYHRHAYGLGEHYNSL 261          
The following BLAST results are available for this feature:
BLAST of EWM27374.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109597|gb|EWM27374.1|0.000e+0100.00Ovarian tumor, otubain [Nannochloropsis gaditana][more]
gi|553187555|ref|XP_005854635.1|1.252e-9579.34otu domain-containing protein 6b [Nannochloropsis ... [more]
gi|301105567|ref|XP_002901867.1|4.159e-5134.97conserved hypothetical protein [Phytophthora infes... [more]
gi|1214708156|gb|OWZ19470.1|2.688e-4935.31OTU ovarian tumor-like cysteine protease [Phytopht... [more]
gi|675165385|ref|XP_008891577.1|5.611e-4834.52hypothetical protein PPTG_02273 [Phytophthora para... [more]
gi|567993388|gb|ETL43567.1|5.921e-4834.88hypothetical protein L916_05950 [Phytophthora para... [more]
gi|568022676|gb|ETL96740.1|6.665e-4834.88hypothetical protein L917_05839 [Phytophthora para... [more]
gi|695389536|ref|XP_009519463.1|3.440e-4734.49OTU ovarian tumor-like cysteine protease [Phytopht... [more]
gi|970629174|gb|KUF76504.1|6.112e-4734.52OTU domain-containing protein 6B [Phytophthora nic... [more]
gi|1183344695|gb|ORX73561.1|7.985e-4741.25OTU-domain-containing protein [Linderina pennispor... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3308rna3308Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications