EWM27374.1, cds3299 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27374.1 vs. NCBI_GenBank
Match: gi|585109597|gb|EWM27374.1| (Ovarian tumor, otubain [Nannochloropsis gaditana]) HSP 1 Score: 523.857 bits (1348), Expect = 0.000e+0 Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0 Query: 1 MEQMEASSPEETVDGAETEEEMRKRHKAEVRQLEGKTRALLKKAPKPKKADVQGEVARMERDMEERHARELGKFAAAPNGGREAEEEAARALAKEGVVSLRDLEMGQILSLLSPLGLRVQEVPADGHCLYRAVAHQLEHQGIPSQGYPEVRRSAAQYILSHPEDFLPFLAGGEEGEGAGLEAYVHTVEDTAEWGGELEIRALCHAYQTPIRVYAAEQPVYMIGAEDYDQAKPLLLSYHRHFYALGEHYNSVVPVEGRVEEG 261 MEQMEASSPEETVDGAETEEEMRKRHKAEVRQLEGKTRALLKKAPKPKKADVQGEVARMERDMEERHARELGKFAAAPNGGREAEEEAARALAKEGVVSLRDLEMGQILSLLSPLGLRVQEVPADGHCLYRAVAHQLEHQGIPSQGYPEVRRSAAQYILSHPEDFLPFLAGGEEGEGAGLEAYVHTVEDTAEWGGELEIRALCHAYQTPIRVYAAEQPVYMIGAEDYDQAKPLLLSYHRHFYALGEHYNSVVPVEGRVEEG Sbjct: 1 MEQMEASSPEETVDGAETEEEMRKRHKAEVRQLEGKTRALLKKAPKPKKADVQGEVARMERDMEERHARELGKFAAAPNGGREAEEEAARALAKEGVVSLRDLEMGQILSLLSPLGLRVQEVPADGHCLYRAVAHQLEHQGIPSQGYPEVRRSAAQYILSHPEDFLPFLAGGEEGEGAGLEAYVHTVEDTAEWGGELEIRALCHAYQTPIRVYAAEQPVYMIGAEDYDQAKPLLLSYHRHFYALGEHYNSVVPVEGRVEEG 261
BLAST of EWM27374.1 vs. NCBI_GenBank
Match: gi|553187555|ref|XP_005854635.1| (otu domain-containing protein 6b [Nannochloropsis gaditana CCMP526] >gi|422294422|gb|EKU21722.1| otu domain-containing protein 6b [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 290.041 bits (741), Expect = 1.252e-95 Identity = 192/242 (79.34%), Postives = 193/242 (79.75%), Query Frame = 0 Query: 1 MEQMEASSPEETVDGAETEEEMRKRHKAEVRQLEGKTRALLKKAPKPKKADVQGEVARMERDMEERHARELGKFAAAPNGGREAEEEAAR-------ALAKE--------------------------------GVVSLRDLEMGQILSLLSPLGLRVQEVPADGHCLYRAVAHQLEHQGIPSQGYPEVRRSAAQYILSHPEDFLPFLAGGEEGEGAGLEAYVHTVEDTAEWGGELEIRALC 203 MEQMEASSPEETVDGAETEEEMRKRHKAEVRQLEGKTRALLKKAPKPKKA+VQGEVARMERDMEERHARELGKFAAAPNGGR EE A A E GVVSLRDLEMGQILSLLSPLGLRVQEVPADGHCLYRAVAHQLEHQGIPSQGYPEVRRSAAQYILSHPEDFLPFLAGGEEGE AGLEAYVHTVEDTAEWGGELEIRAL Sbjct: 1 MEQMEASSPEETVDGAETEEEMRKRHKAEVRQLEGKTRALLKKAPKPKKAEVQGEVARMERDMEERHARELGKFAAAPNGGRGKGEEGESEEEEDGGATAAEKVARKRDKARRKKERKAEREAEEEAARALAKEGVVSLRDLEMGQILSLLSPLGLRVQEVPADGHCLYRAVAHQLEHQGIPSQGYPEVRRSAAQYILSHPEDFLPFLAGGEEGEAAGLEAYVHTVEDTAEWGGELEIRALA 242
BLAST of EWM27374.1 vs. NCBI_GenBank
Match: gi|301105567|ref|XP_002901867.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262099205|gb|EEY57257.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 177.948 bits (450), Expect = 4.159e-51 Identity = 100/286 (34.97%), Postives = 155/286 (54.20%), Query Frame = 0 Query: 17 ETEEEMRKRHKAEVRQLEGKTRALLKKAPKPK--KADVQGEVARMERDMEERHARELGKFAAAPNGGREAEEEAA------------------------------------RALAKEGVVSLRDLEMGQILSLLSPLGLRVQEVPADGHCLYRAVAHQLEHQGIPS----QGYPEVRRSAAQYILSHPEDFLPFLAGGEEGEG--AGLEAYVHTVEDTAEWGGELEIRALCHAYQTPIRVYAAEQPVYMIG----AEDYDQAKPLLLSYHRHFYALGEHYNSVVPV 254 ET + ++RHK E+R ++ +A KKA K + K D++ +VA ME +++RH +EL F + A+ +A A + VS R +E IL+ LS GL+++++P+DGHC+Y AVA Q++ + +PS G+ +R+ ++Y+L+HP+DFLPF+A E E Y + +TA+WGG+LE+RAL A TPI V++AE V ++G +ED + A L L+YH H+Y LGEH+NSV PV Sbjct: 6 ETLGQAKQRHKLELRTMQNDIKAFQKKAKKDRLSKKDIETQVATMEDAVKDRHEQELKSFNTEEDDVDAAQPDAVPGQPGSTVLSKQAKAQAKAQRKREVKKQQERERHERIEEANKNTVSERQIEADMILAQLSRHGLKIKDIPSDGHCMYHAVADQMKQKNLPSAIEMAGFQYLRKLTSEYMLAHPDDFLPFMALDESSASPEDAFETYCDRLANTADWGGQLELRALACALHTPIEVFSAEGDVLVMGGEFVSEDDESAPKLQLTYHLHYYTLGEHFNSVAPV 291
BLAST of EWM27374.1 vs. NCBI_GenBank
Match: gi|1214708156|gb|OWZ19470.1| (OTU ovarian tumor-like cysteine protease [Phytophthora megakarya]) HSP 1 Score: 173.326 bits (438), Expect = 2.688e-49 Identity = 101/286 (35.31%), Postives = 151/286 (52.80%), Query Frame = 0 Query: 17 ETEEEMRKRHKAEVRQLEGKTRALLKKAPKPK--KADVQGEVARMERDMEERHARELGKFAAAPNGGREAEEEAARAL------------------------------------AKEGVVSLRDLEMGQILSLLSPLGLRVQEVPADGHCLYRAVAHQLEHQGIP----SQGYPEVRRSAAQYILSHPEDFLPFLAGGEEGEGA--GLEAYVHTVEDTAEWGGELEIRALCHAYQTPIRVYAAEQPVYMIGA----EDYDQAKPLLLSYHRHFYALGEHYNSVVPV 254 ET + ++RHK E+R L+ + +A KKA K + K D + +VA ME M+ERH +EL F + E +A A A + VS R +E IL+ LS GL+++++ +DGHC+Y AVA Q++ + +P G+ +RR ++Y+L+HP+DFLPF+A E + Y V +TA+WGG+LE+RAL A +TPI V++AE V ++G ED + A L L+YH H+Y LGEH+NSV Sbjct: 6 ETLGQTKQRHKLELRTLQTEVKAFQKKAKKDRLSKKDTETQVAVMENAMKERHDQELLAFETMTDDVPETRTDAFSATPDTAAFSKQAKAQAKAQRKREAKKQQERERRERIEEANKNTVSERQIEADMILAQLSRHGLQIKDIASDGHCMYHAVADQMKQKNLPIADDMTGFQYLRRLTSEYMLAHPDDFLPFMALDEASDSLEDAFANYCDRVANTADWGGQLELRALACALRTPIEVFSAEGDVLVMGGEFVNEDDESAPKLQLTYHLHYYTLGEHFNSVTTC 291
BLAST of EWM27374.1 vs. NCBI_GenBank
Match: gi|675165385|ref|XP_008891577.1| (hypothetical protein PPTG_02273 [Phytophthora parasitica INRA-310] >gi|566027371|gb|ETI50282.1| hypothetical protein F443_06136 [Phytophthora parasitica P1569] >gi|567964674|gb|ETK90157.1| hypothetical protein L915_06017 [Phytophthora parasitica] >gi|568053037|gb|ETM49890.1| hypothetical protein L914_05960 [Phytophthora parasitica] >gi|568107678|gb|ETN22302.1| hypothetical protein PPTG_02273 [Phytophthora parasitica INRA-310] >gi|570954790|gb|ETP20047.1| hypothetical protein F441_06147 [Phytophthora parasitica CJ01A1] >gi|570989880|gb|ETP48007.1| hypothetical protein F442_06173 [Phytophthora parasitica P10297]) HSP 1 Score: 169.859 bits (429), Expect = 5.611e-48 Identity = 97/281 (34.52%), Postives = 149/281 (53.02%), Query Frame = 0 Query: 17 ETEEEMRKRHKAEVRQLEGKTRALLKKAPKPK--KADVQGEVARMERDMEERHARELGKFAAAPNGGR----------------------------EAEEE------AARALAKEGVVSLRDLEMGQILSLLSPLGLRVQEVPADGHCLYRAVAHQLEHQGIP----SQGYPEVRRSAAQYILSHPEDFLPFLAGGEEGEG--AGLEAYVHTVEDTAEWGGELEIRALCHAYQTPIRVYAAEQPVYMIGAEDYDQAKP-LLLSYHRHFYALGEHYNSVVPV 254 ET + ++RHK E+R L+ +A KKA K + K D++ +V ME ++ERH EL F + EA+++ A + VS R +E IL+ L+ GL+++++P+DGHC+Y AVA Q++ +P G+ +R+ ++Y+L+HP DFLPF+A E Y + +TA+WGG+LE+RAL A QTPI V++A V ++G E + + P L L+YH H+Y LGEH+NSV PV Sbjct: 6 ETLGQTKQRHKLELRTLQNDVKAFQKKAKKDRMSKKDIEAQVLAMENAVKERHDAELKAFKTEEDEAETPAAAPAEPEAAVPSKQAKAQAKAQRKREAKKQQERERRERIEEANKNTVSERQIEADMILAQLARQGLKIKDIPSDGHCMYHAVADQMKQMNMPIADEVAGFQYLRKLTSEYMLAHPNDFLPFIAVDESSANPEDAFVTYCDRLANTADWGGQLELRALACALQTPIEVFSAHGDVLVMGDEFVNDSAPKLQLTYHLHYYTLGEHFNSVTPV 286
BLAST of EWM27374.1 vs. NCBI_GenBank
Match: gi|567993388|gb|ETL43567.1| (hypothetical protein L916_05950 [Phytophthora parasitica] >gi|570331116|gb|ETO79064.1| hypothetical protein F444_06198 [Phytophthora parasitica P1976]) HSP 1 Score: 169.474 bits (428), Expect = 5.921e-48 Identity = 98/281 (34.88%), Postives = 150/281 (53.38%), Query Frame = 0 Query: 17 ETEEEMRKRHKAEVRQLEGKTRALLKKAPKPK--KADVQGEVARMERDMEERHARELGKFAAAPN----------------------------GGREAEEE------AARALAKEGVVSLRDLEMGQILSLLSPLGLRVQEVPADGHCLYRAVAHQLEHQGIP----SQGYPEVRRSAAQYILSHPEDFLPFLAGGEEGEG--AGLEAYVHTVEDTAEWGGELEIRALCHAYQTPIRVYAAEQPVYMIGAEDYDQAKP-LLLSYHRHFYALGEHYNSVVPV 254 ET + ++RHK E+R L+ +A KKA K + K D++ +V ME ++ERH EL F + REA+++ A + VS R +E IL+ L+ GL+++++P+DGHC+Y AVA Q++ +P G+ +R+ ++Y+L+HP DFLPF+A E Y + +TA+WGG+LE+RAL A QTPI V++A V ++G E + + P L L+YH H+Y LGEH+NSV PV Sbjct: 6 ETLGQTKQRHKLELRTLQNDVKAFQKKAKKDRMSKKDIEAQVLAMENAVKERHDAELKAFKTEEDETDTPAAAPAEPEAAVPSKQAKAQAKAQRKREAKKQQERERRERIEEANKNTVSERQIEADMILAQLARQGLKIKDIPSDGHCMYHAVADQMKQMNMPIADEVAGFQYLRKLTSEYMLAHPNDFLPFIAVDESSANPEDAFVTYCDRLANTADWGGQLELRALACALQTPIEVFSAHGDVLVMGDEFVNDSAPKLQLTYHLHYYTLGEHFNSVTPV 286
BLAST of EWM27374.1 vs. NCBI_GenBank
Match: gi|568022676|gb|ETL96740.1| (hypothetical protein L917_05839 [Phytophthora parasitica]) HSP 1 Score: 169.474 bits (428), Expect = 6.665e-48 Identity = 98/281 (34.88%), Postives = 150/281 (53.38%), Query Frame = 0 Query: 17 ETEEEMRKRHKAEVRQLEGKTRALLKKAPKPK--KADVQGEVARMERDMEERHARELGKFAAAPN----------------------------GGREAEEE------AARALAKEGVVSLRDLEMGQILSLLSPLGLRVQEVPADGHCLYRAVAHQLEHQGIP----SQGYPEVRRSAAQYILSHPEDFLPFLAGGEEGEG--AGLEAYVHTVEDTAEWGGELEIRALCHAYQTPIRVYAAEQPVYMIGAEDYDQAKP-LLLSYHRHFYALGEHYNSVVPV 254 ET + ++RHK E+R L+ +A KKA K + K D++ +V ME ++ERH EL F + REA+++ A + VS R +E IL+ L+ GL+++++P+DGHC+Y AVA Q++ +P G+ +R+ ++Y+L+HP DFLPF+A E Y + +TA+WGG+LE+RAL A QTPI V++A V ++G E + + P L L+YH H+Y LGEH+NSV PV Sbjct: 6 ETLGQTKQRHKLELRTLQNDVKAFQKKAKKDRMSKKDIEAQVLAMENAVKERHDAELKAFKTEEDETDTPAAAPAEPEAAVPSKQAKAQAKAQRKREAKKQQERERRERIEEANKNTVSERQIEADMILAQLARQGLKIKDIPSDGHCMYHAVADQMKQMNMPIANEVAGFQYLRKLTSEYMLAHPNDFLPFIAVDESSANPEDAFVTYCDRLANTADWGGQLELRALACALQTPIEVFSAHGDVLVMGDEFVNDSAPKLQLTYHLHYYTLGEHFNSVTPV 286
BLAST of EWM27374.1 vs. NCBI_GenBank
Match: gi|695389536|ref|XP_009519463.1| (OTU ovarian tumor-like cysteine protease [Phytophthora sojae] >gi|348684360|gb|EGZ24175.1| OTU ovarian tumor-like cysteine protease [Phytophthora sojae]) HSP 1 Score: 167.933 bits (424), Expect = 3.440e-47 Identity = 99/287 (34.49%), Postives = 151/287 (52.61%), Query Frame = 0 Query: 16 AETEEEMRKRHKAEVRQLEGKTRALLKKAPKPK--KADVQGEVARMERDMEERHARELGKF------------------------------AAAPNGGREAEEE------AARALAKEGVVSLRDLEMGQILSLLSPLGLRVQEVPADGHCLYRAVAHQLEHQGIP----SQGYPEVRRSAAQYILSHPEDFLPFLAGGEEGEG--AGLEAYVHTVEDTAEWGGELEIRALCHAYQTPIRVYAAEQPVYMIGA----EDYDQAKPLLLSYHRHFYALGEHYNSVVPV 254 ET + ++RHK E+R L+ +A KKA K + K D++ +VA ME ++ERH +EL F A REA+++ A + VS R +E I + L+ GL+++++P+DGHC+Y AVA Q++ + +P G+ +R+ + Y+L+H +DFLPF+A E Y V +TA+WGG+LE+RAL A +TPI V++AE V ++G ED A L L+YH H+Y LGEH+NSV P+ Sbjct: 5 TETLGQTKQRHKLELRNLQNDVKAFQKKAKKDRLSKKDIETQVAAMESALKERHKQELKAFETETDDQDAADSSPAPAEAEAETETAVPSKQAKAQRKREAKKQQERERRERIEEANKNTVSERQIEADVIAAQLARHGLQIKDIPSDGHCMYHAVADQMKQKNLPIGDVVAGFQYLRKLTSDYMLAHEDDFLPFMALDEAAASPEEAFATYCDRVANTADWGGQLELRALACALRTPIEVFSAEGDVLVMGGEFLNEDDGNATKLQLTYHLHYYTLGEHFNSVTPM 291
BLAST of EWM27374.1 vs. NCBI_GenBank
Match: gi|970629174|gb|KUF76504.1| (OTU domain-containing protein 6B [Phytophthora nicotianae]) HSP 1 Score: 167.162 bits (422), Expect = 6.112e-47 Identity = 97/281 (34.52%), Postives = 148/281 (52.67%), Query Frame = 0 Query: 17 ETEEEMRKRHKAEVRQLEGKTRALLKKAPKPK--KADVQGEVARMERDMEERHARELGKFAAAPNGGR----------------------------EAEEE------AARALAKEGVVSLRDLEMGQILSLLSPLGLRVQEVPADGHCLYRAVAHQLEHQGIP----SQGYPEVRRSAAQYILSHPEDFLPFLAGGEEGEG--AGLEAYVHTVEDTAEWGGELEIRALCHAYQTPIRVYAAEQPVYMIGAEDYDQAKP-LLLSYHRHFYALGEHYNSVVPV 254 ET + ++RHK E+R L+ +A KKA K + K D++ +V ME ++ERH EL F + EA+++ A + VS R +E IL+ L+ GL+++++P+DGHC+Y AVA Q++ +P G +R+ ++Y+L+HP DFLPF+A E Y + +TA+WGG+LE+RAL A QTPI V++A V ++G E + + P L L+YH H+Y LGEH+NSV PV Sbjct: 6 ETLGQTKQRHKLELRTLQNDVKAFQKKAKKDRMSKKDIEAQVLAMENAVKERHDAELKAFKTEEDEADTPAAAPAEPEAAVPSKQAKAQAKAQRKREAKKQQERERRERIEEANKNTVSERQIEADMILAQLARQGLKIKDIPSDGHCMYHAVADQMKQMNMPIADEVAGXQYLRKLTSEYMLAHPNDFLPFIAVDESSANPEDAFVTYCDRLANTADWGGQLELRALACALQTPIEVFSAHGDVLVMGDEFVNDSAPKLQLTYHLHYYTLGEHFNSVTPV 286
BLAST of EWM27374.1 vs. NCBI_GenBank
Match: gi|1183344695|gb|ORX73561.1| (OTU-domain-containing protein [Linderina pennispora]) HSP 1 Score: 166.007 bits (419), Expect = 7.985e-47 Identity = 106/257 (41.25%), Postives = 134/257 (52.14%), Query Frame = 0 Query: 18 TEEEMRKRHKAEVRQLEGKTRALLKKAPK---PKKADVQGEVARMERDMEERHARELGKF----AAAPNGG-------------REAEEEAARALAKEGVVSLRDLEMGQILSLLSPLGLRVQEVPADGHCLYRAVAHQLE-HQGIPSQGYPEVRRSAAQYILSHPEDFLPFLA--GGEEGEGAGLEAYVHTVEDTAEWGGELEIRALCHAYQTPIRVYAAEQPVYMIGAEDYDQAKPLLLSYHRHFYALGEHYNSV 251 T EE+ RH+ E ++L K +L K PK KK +V E+A +E + ERH EL + AAAP R +EEA R EG V L +E I L L V ++ ADGHCLY A A QL + + Y ++R AAQY+ SH +DFLPF+A G+ E Y +E TAEWGG+ EI AL HA + P+ VY PV IG E Y P+ LSYHRH Y LGEHYNS+ Sbjct: 7 TIEELETRHRKETKELTSKVMSLKKSIPKGDKRKKKEVTAEIAVLEAQLAERHDAELAELKQALAAAPTTDEAKQRQQKRQEEMRRMQEEAERE--AEGQVDLGQVESAAIDKLAERDCLLVHQIKADGHCLYSAFADQLNTYHNADALDYADMREKAAQYMRSHRDDFLPFMARDDGDMFSEMDFEEYCDKIEKTAEWGGQQEITALAHALEVPVHVYQMGAPVLKIGDELYQPKSPVTLSYHRHAYGLGEHYNSL 261 The following BLAST results are available for this feature:
BLAST of EWM27374.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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