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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100438g3.1496.mrna |
| Orig protein id | gnl|cribi|Naga_100438g3.1496 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:52588..54080 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3303 ID=rna3303|Name=rna3303|organism=Nannochloropsis gaditana|type=mRNA|length=1606bp
CATGCTTATTTTACGAACTTTTCTACAAGCAGTACTCTCGACACCCATTT
TTCCCGTAATAATGATGTCTTTTTTTTTGAAGAAAAATAACAAATGAGCT
TACTTTACAGACCTGAAACACTTTTTTGGAGCCATTTATAACCAGAAACC
GCTCCATGAAAAAGTAAAGAATCATGCAAGAAAACCTTCCGCCACCTGTG
CCCAGATCGGTAAACCTTGAAAAGTATCGATCTACTGTCGCAGTGGCACG
CATACAATTGACCCTATTCTCTATATATTGTTTATATATGACCCTATATC
TCTTTTAACGCGTTCAAAAGCATTTTGGGGCTGATAATTTCCTTCGTTCT
GCGTTGTTTTTCAAGCTTGCTGTAACTCCCTCTGTAAGAGCGTGACGCCG
CTAACTCACTCTCGCACCGTAGCATTTCCCCTCCCTCTCAAAGCGTCAGC
ACTTTTGATTTTTCACCACAAAAACGAAAAAGCTGCCTCGTCGTTCATCA
TGACTTCGATCCCTTCCTCTTCCCCTTCTTCCGCCGCACTTTCCCTCCCT
TCCTCCACGTCAATGAGCTGCCCTGCCTTGAGCAATTCTGCTATCTCATC
CATCTCTACTGCGGCACTTTCTCCGGGAATCGAGCTTTCTATTGCCTCTT
TTTCGCATGGACGTTCAGTCATGATCCGTGTGTGAAACGGCTGCTTCTTT
TTAGGCTCGGGATCGTTGTCTGACATCAGGTACGAATCTAGCATGTACCT
TTCTCCGGAACCGTTTGATGACCTCTCCTCCATCGCCCAGCCTTTCCCCT
CTTTTTTCCTATCTGCCAGCTCTTCACTCATTGGACGATCGCTCGTTCCC
TCCTTCCTTCCTGCCTCCCATTGCTCCCCACTTCCAGCATCCACTGCCTT
CTTCCCTCCCCAGCTGCTTCCTCCCTCCTTCCCCTCCAGGTGGCCCTCCA
CGTTCTCTGTGCTTCCCTCCGCGGCTGTCCCACAGCCCATAGCCGCATTG
CCCTCCCCTCCCCCTACTCCACTCTTTATCCATTCCTCTCCCCTATCTCC
CACCTGTTCGCTGGTATCGTGTCCGATCCGTGTATTCGCAACGCCACCCT
CGAATCCCTCCCCCGTTACCTCCGCTAGTACTCTCCCCTCCCTCTGGCTC
GGCATCTGACCATTCCCTTCCCCCATGATTAGCCGCCCGTCTCCCCGCTC
CGCCGTGTCCACCTCCATTTCTTCCTCCTCCTCGCTACTCACGGAGCACA
CGCTTTCCTCCTCGCTCTCTTCGTCCCTCTCCCCTTCGCTTTCCTCCCTC
TCCTCCCCTCCCCCTACCTCATCTTCGGTTGGACGCTTCCTCTTCCCTGT
CCCCTCCTCCTCTCTGGCCCTGAAGTACACCTCCGGCGTCACCTCCTTCC
CGTCCTCCACATTCCTGAAGAAAAGCAGCCTCTCGTCCCCCTTCATCCAG
CCATGCCGCTGAGGCTCTGCTACCACCTCCGTGGCCGCTATTGCTGTCTC
TTCCCCTCCCGCGTCGGCGGCAAGAGTGGCAGGGTAGACGAAGTACGGCA
CCCACTGGGCGGACAGGGGTTAAGGAAAGGAGGAAAGAACAAAAAATCAG
AGAAGG back to topprotein sequence of rna3303 >rna3303-protein ID=rna3303-protein|Name=rna3303|organism=Nannochloropsis gaditana|type=polypeptide|length=244bp
MTISIRKTGHPTMKSSPSRALSTVAYGLVFLVPVFITVIIGLVPLKNFPT
NDVSVPPFNLLQRANVTEYALRSASFPSLFYLFLSLPPPSGPLHGEYLAE
ILDAGSLAANVLGWIGFTPFFPGAWIGKSFVEATDEKDGWGYNVFRWFGA
RLDRRFKMHTCITTSVWDGRPSFQLQYAGETHLLGRLRMRDEVREIQPGL
YLGMGTFGYSEAKRRGDPLPFLLRGPYQAPVPGAVRESFWPKAG back to topmRNA from alignment at CM002461.1:52588..54080+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3303 ID=rna3303|Name=rna3303|organism=Nannochloropsis gaditana|type=mRNA|length=1493bp|location=Sequence derived from alignment at CM002461.1:52588..54080+ (Nannochloropsis gaditana)
AAATGCGCACCATAACGTCAATGGTCCTTGATATGTCTGCACATTTACCA
CTTTTTTTGATCCGTTAGAAAGCTAAGGATGTATCGGTTTGTCTAGGGAA
GCTTTCTTTTCAGAGGAAAAGGCTGGGCAGACACGACCGGCCCTTCCGCT
CGAGATATGATAGACAACGTGCGTCAACATGCATGTAATTGTAAGATACA
TGACAATGAGCATTACTCTTACGGTCGATCCAACTGGGTGCTCACGGCCT
TTTAATGACGATTTCTATACGGAAAACAGGGCACCCGACCATGAAGAGCA
GCCCATCACGCGCGCTTTCCACCGTCGCATAtggccttgtcttccttgtT
CCTGTCTTCATCACTGTCATCATAGGCCTCGTCCCGCTCAAAAATTTCCC
CACCAACGATGTTTCTGTGCCACCTTTCAACCTCTTACAACGTGCTAACG
TGACTGAGTACGCACTTCGCAGCgcatctttcccctccctcttctatctc
tttctctccctcccaccgccttccgGGCCATTGCACGGGGAATACCTCGC
GGAGATACTGGATGCAGGCTCGCTTGCTGCCAATGTGCTGGGATGGATTG
GCTTcacccccttttttcccggAGCGTGGATAGGAAAATCCTTCGTGGAA
GCCACCGATGAAAAGGACGGATGGGGGTATAACGTCTTCAGATGGTTCGG
CGCGCGGCTGGACCGTCGTTTCAAGATGCACACGTGCATCACCACTTCAG
TGTGGGACGGCCGGCCATCGTTTCAGCTGCAATACGCCGGAGAAACCCAC
CTGTTGGGCCGCCTGCGCATGCGAGACGAGGTGCGGGAAATCCAACCGGG
GCTGTACTTGGGGATGGGCACGTTTGGCTACAGCGAAGCGAAACGGCGGG
GCGACCCGTTACCCTTCCTGCTGCGTGGGCCCTATCAAGCACCGGTCCCG
GGGGCGGTGCGCGAGTCCTTTTGGCCCAAGGCCGGTTAAGAAGGCTCGGG
CGCCCAAGTCATCAAACCACGCATGCCGGTGGAGAAAGGCCGGCGGAAAC
CCGTCGTATTCGCTTGGAAGCGAAATGGCAGTAGCGGCGACCAATCGTTT
GACGTCCCATTAGCTGACTCCATGCCTCGCTTGAGGAGGCTtgcatccct
ctctcctggtCAGCCTGCCCCGCCGCGGTTCTGAAATCCCGAATCGAAGA
TGCAGGGCCTCGTGTGGCGGGATTGGGTGTTAGACAAGATGAGGGGCATT
CACGCGCGTTTTGGGTGGGCGAATGCACGTGGTCACGACGAATGGGTTAA
GGAGACGGTGGCTCGCCATGGAGACGACAGCTGACGTGCGCGGGGCGACT
CAGGCACAGCCTGATGGAGAGATCTTTATCGCCCATTAAGTAACTTGACG
GATTTGTCTTCCCAAAAAATCGGTCGTTTATTGCATTCATTTGCAAAAAA
TTATTTGCTCGCGTTGGGAAATGCCTTTGCATCCGACTTTTCA back to topCoding sequence (CDS) from alignment at CM002461.1:52588..54080+ >rna3303 ID=rna3303|Name=rna3303|organism=Nannochloropsis gaditana|type=CDS|length=735bp|location=Sequence derived from alignment at CM002461.1:52588..54080+ (Nannochloropsis gaditana)
ATGACGATTTCTATACGGAAAACAGGGCACCCGACCATGAAGAGCAGCCC
ATCACGCGCGCTTTCCACCGTCGCATAtggccttgtcttccttgtTCCTG
TCTTCATCACTGTCATCATAGGCCTCGTCCCGCTCAAAAATTTCCCCACC
AACGATGTTTCTGTGCCACCTTTCAACCTCTTACAACGTGCTAACGTGAC
TGAGTACGCACTTCGCAGCgcatctttcccctccctcttctatctctttc
tctccctcccaccgccttccgGGCCATTGCACGGGGAATACCTCGCGGAG
ATACTGGATGCAGGCTCGCTTGCTGCCAATGTGCTGGGATGGATTGGCTT
cacccccttttttcccggAGCGTGGATAGGAAAATCCTTCGTGGAAGCCA
CCGATGAAAAGGACGGATGGGGGTATAACGTCTTCAGATGGTTCGGCGCG
CGGCTGGACCGTCGTTTCAAGATGCACACGTGCATCACCACTTCAGTGTG
GGACGGCCGGCCATCGTTTCAGCTGCAATACGCCGGAGAAACCCACCTGT
TGGGCCGCCTGCGCATGCGAGACGAGGTGCGGGAAATCCAACCGGGGCTG
TACTTGGGGATGGGCACGTTTGGCTACAGCGAAGCGAAACGGCGGGGCGA
CCCGTTACCCTTCCTGCTGCGTGGGCCCTATCAAGCACCGGTCCCGGGGG
CGGTGCGCGAGTCCTTTTGGCCCAAGGCCGGTTAA back to top
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