EWM27381.1, cds3294 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27381.1 vs. NCBI_GenBank
Match: gi|585109606|gb|EWM27381.1| (hypothetical protein Naga_100438g3 [Nannochloropsis gaditana]) HSP 1 Score: 496.123 bits (1276), Expect = 2.031e-177 Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 0 Query: 1 MTISIRKTGHPTMKSSPSRALSTVAYGLVFLVPVFITVIIGLVPLKNFPTNDVSVPPFNLLQRANVTEYALRSASFPSLFYLFLSLPPPSGPLHGEYLAEILDAGSLAANVLGWIGFTPFFPGAWIGKSFVEATDEKDGWGYNVFRWFGARLDRRFKMHTCITTSVWDGRPSFQLQYAGETHLLGRLRMRDEVREIQPGLYLGMGTFGYSEAKRRGDPLPFLLRGPYQAPVPGAVRESFWPKAG 244 MTISIRKTGHPTMKSSPSRALSTVAYGLVFLVPVFITVIIGLVPLKNFPTNDVSVPPFNLLQRANVTEYALRSASFPSLFYLFLSLPPPSGPLHGEYLAEILDAGSLAANVLGWIGFTPFFPGAWIGKSFVEATDEKDGWGYNVFRWFGARLDRRFKMHTCITTSVWDGRPSFQLQYAGETHLLGRLRMRDEVREIQPGLYLGMGTFGYSEAKRRGDPLPFLLRGPYQAPVPGAVRESFWPKAG Sbjct: 1 MTISIRKTGHPTMKSSPSRALSTVAYGLVFLVPVFITVIIGLVPLKNFPTNDVSVPPFNLLQRANVTEYALRSASFPSLFYLFLSLPPPSGPLHGEYLAEILDAGSLAANVLGWIGFTPFFPGAWIGKSFVEATDEKDGWGYNVFRWFGARLDRRFKMHTCITTSVWDGRPSFQLQYAGETHLLGRLRMRDEVREIQPGLYLGMGTFGYSEAKRRGDPLPFLLRGPYQAPVPGAVRESFWPKAG 244
BLAST of EWM27381.1 vs. NCBI_GenBank
Match: gi|553181668|ref|XP_005853604.1| (hypothetical protein NGA_0429500 [Nannochloropsis gaditana CCMP526] >gi|422295457|gb|EKU22756.1| hypothetical protein NGA_0429500 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 471.085 bits (1211), Expect = 9.562e-168 Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 0 Query: 13 MKSSPSRALSTVAYGLVFLVPVFITVIIGLVPLKNFPTNDVSVPPFNLLQRANVTEYALRSASFPSLFYLFLSLPPPSGPLHGEYLAEILDAGSLAANVLGWIGFTPFFPGAWIGKSFVEATDEKDGWGYNVFRWFGARLDRRFKMHTCITTSVWDGRPSFQLQYAGETHLLGRLRMRDEVREIQPGLYLGMGTFGYSEAKRRGDPLPFLLRGPYQAPVPGAVRESFWPKAG 244 MKSSPSRALSTVAYGLVFLVPVFITVIIGLVPLKNFPTNDVSVPPFNLLQRANVTEYALRSASFPSLFYLFLSLPPPSGPLHGEYLAEILDAGSLAANVLGWIGFTPFFPGAWIGKSFVEATDEKDGWGYNVFRWFGARLDRRFKMHTCITTSVWDGRPSFQLQYAGETHLLGRLRMRDEVREIQPGLYLGMGTFGYSEAKRRGDPLPFLLRGPYQAPVPGAVRESFWPKAG Sbjct: 1 MKSSPSRALSTVAYGLVFLVPVFITVIIGLVPLKNFPTNDVSVPPFNLLQRANVTEYALRSASFPSLFYLFLSLPPPSGPLHGEYLAEILDAGSLAANVLGWIGFTPFFPGAWIGKSFVEATDEKDGWGYNVFRWFGARLDRRFKMHTCITTSVWDGRPSFQLQYAGETHLLGRLRMRDEVREIQPGLYLGMGTFGYSEAKRRGDPLPFLLRGPYQAPVPGAVRESFWPKAG 232
BLAST of EWM27381.1 vs. NCBI_GenBank
Match: gi|954175914|ref|WP_058088024.1| (hypothetical protein [Aquabacterium parvum]) HSP 1 Score: 114.775 bits (286), Expect = 6.598e-28 Identity = 70/171 (40.94%), Postives = 98/171 (57.31%), Query Frame = 0 Query: 67 TEYALRSASFPSLFYLFLSLPPPS-GPLHGEYLAEILDAGSLAANVLGWIGFT-PFFPGAWIGKSFVEATDEKDGWGYNVFRWFGARLDRRFKMHTCITTSVWDGRPSFQLQYAGETHLLGRLRMRDEVREIQPGLYLGMGTFGYSEAKRRGDPLPFLLRGPYQAPVPGAV 235 TE AL + F L LF LP P+ + GE+ A +L + A V+G + P PG W+ K+F + G GYN F G R +R+ M T I S +DGRP++ L YA + G + M DEVR + PGLYLG+GT+G+++ +R+ PLPF+LRGP AP G + Sbjct: 17 TESALLAMGFKDLMALFDKLPAPTIQEMDGEFAARLLAQPNAVAQVIGNLTVNNPLMPGRWLCKAF-KPVSAVGGQGYNSFAHLG-RTVQRYPMQTLIAPSRYDGRPAYTLVYAAFQSMCGAIHMVDEVRRVAPGLYLGIGTWGFTDGQRQ-VPLPFVLRGPI-APYAGHI 183
BLAST of EWM27381.1 vs. NCBI_GenBank
Match: gi|502616118|ref|WP_012853029.1| (hypothetical protein [Thermomonospora curvata] >gi|268311871|gb|ACY98245.1| conserved hypothetical protein [Thermomonospora curvata DSM 43183]) HSP 1 Score: 114.39 bits (285), Expect = 7.044e-28 Identity = 73/168 (43.45%), Postives = 97/168 (57.74%), Query Frame = 0 Query: 78 SLFYLFLSLPPPS-GPLHGEYLAEILDAGSLAANVLGWIGFTPFFPGAWIGKSFVEATDEKDGWGYNVFRWFGARLDRRFKMHTCITTSVWDGRPSFQLQYAGETHLLGRLRMRDEVREIQPGLYLGMGTFGYSEAKRRGDPLPFLLR---GPYQAPVPGAVRESFWP 241 L LF +LP PS ++GEY A +L + A+V G + F W+ K F D++ G GYN FR FG R+ RR+ MHT I S +DGRP++ L Y + G + M DEVR PG+YLG+GT+G++E +RR PLPFLL GPY+ V G R F P Sbjct: 17 ELLALFTTLPAPSIEEMNGEYAARLLAQPNAFASVTGHAAVSNPF-ARWLCKGF-RPVDDRTGRGYNTFRQFG-RVRRRYAMHTLIAPSRYDGRPAYTLVYRAYGSVCGAINMVDEVRRAAPGVYLGIGTWGFTERQRR-IPLPFLLTGPVGPYRGDV-GTARRGFTP 179
BLAST of EWM27381.1 vs. NCBI_GenBank
Match: gi|651268610|ref|WP_026401802.1| (hypothetical protein [Actinomadura rifamycini]) HSP 1 Score: 107.457 bits (267), Expect = 2.754e-25 Identity = 71/164 (43.29%), Postives = 94/164 (57.32%), Query Frame = 0 Query: 82 LFLSLPPPS-GPLHGEYLAEILDAGSLAANVLGWIGFTPFFPGAWIGKSFVEATDEKDGWGYNVFRWFGARLDRRFKMHTCITTSVWDGRPSFQLQYAGETHLLGRLRMRDEVREIQPGLYLGMGTFGYSEAKRRGDPLPFLLRGP---YQAPVPGAVRESFWP 241 F +LP PS + GEY A +L S+ A+V G G W+ K+F D + G GYN FR FG R+ +R+ MHT I S +DGRP++ L Y + G + M DEVR PG+YLG+GT+G++ +RR PLPFLL GP Y+ V GA R F P Sbjct: 21 FFATLPAPSIEEMDGEYTARLLAQPSVFASVTGR-GTVSNPLARWLCKAF-RPVDGQTGRGYNTFRQFG-RIRQRYAMHTLIAPSRYDGRPAYTLVYRAYASMCGAINMVDEVRRAAPGVYLGIGTWGFTARQRR-VPLPFLLTGPVGAYRGDV-GAARRGFTP 179
BLAST of EWM27381.1 vs. NCBI_GenBank
Match: gi|1110699919|ref|WP_071925805.1| (hypothetical protein [Nocardia soli] >gi|1108541135|gb|APE32784.1| hypothetical protein BOX37_01005 [Nocardia soli]) HSP 1 Score: 104.375 bits (259), Expect = 3.962e-24 Identity = 70/175 (40.00%), Postives = 94/175 (53.71%), Query Frame = 0 Query: 71 LRSASFPSLFYLFLSLPPPS-GPLHGEYLAEILDAGSLAANVLGWIGFTPFFPGAWIGKSFVEATDEKDGWGYNVFRWFGARLDRRFKMHTCITTSVWDGRPSFQLQYAGETHLLGRLRMRDEVREIQPGLYLGMGTFGYSEAKRRGDPLPFLLRGP---YQAPVPGAVRESFWP 241 LR L LF L P+ + GEY A +L +L A V G + G W+ K+F D G GYN FR FG R+ +R+ M T I S +DG P++ L Y T + G + M DE+R PG+YLGMGT+G+++A+RR P PFLL GP Y+ + G R F P Sbjct: 10 LRRLDTSELLALFTDLEAPTIAEIDGEYTAALLAQPNLFAMVTGKVAVANPL-GPWLCKAF-RPVDANGGRGYNTFREFG-RVRQRYPMRTLIAPSRYDGAPAYTLVYRAYTSMCGSIHMVDELRRAAPGVYLGMGTWGFTDAQRR-VPRPFLLTGPVGEYRGDI-GTARPDFTP 179
BLAST of EWM27381.1 vs. NCBI_GenBank
Match: gi|760019997|ref|WP_043703152.1| (hypothetical protein [Nocardia abscessus]) HSP 1 Score: 103.99 bits (258), Expect = 7.256e-24 Identity = 70/175 (40.00%), Postives = 96/175 (54.86%), Query Frame = 0 Query: 71 LRSASFPSLFYLFLSLPPPS-GPLHGEYLAEILDAGSLAANVLGWIGFTPFFPGAWIGKSFVEATDEKDGWGYNVFRWFGARLDRRFKMHTCITTSVWDGRPSFQLQYAGETHLLGRLRMRDEVREIQPGLYLGMGTFGYSEAKRRGDPLPFLLR---GPYQAPVPGAVRESFWP 241 LR L LF +L P+ + GEY A +L +L A V G + G W+ K+F DE G GYN F FG R+ +R+ M T + S +DG P++ L Y T + G + M DEVR PG+YLGMGT+G+++A+RR P PFLL GPY+ + G R +F P Sbjct: 10 LRRLDTSGLLALFTTLEAPTIAEIDGEYTAALLAQPNLFAVVTGKVAVANPL-GPWLCKAF-RPVDENGGRGYNTFGEFG-RVRQRYPMRTLLAPSRYDGAPAYTLIYRAYTSMCGSIHMVDEVRRAAPGVYLGMGTWGFTDAQRR-VPRPFLLTGPVGPYRGDI-GIARPAFTP 179
BLAST of EWM27381.1 vs. NCBI_GenBank
Match: gi|1016332824|ref|WP_063002839.1| (hypothetical protein [Nocardia cummidelens]) HSP 1 Score: 102.449 bits (254), Expect = 2.934e-23 Identity = 69/175 (39.43%), Postives = 94/175 (53.71%), Query Frame = 0 Query: 71 LRSASFPSLFYLFLSLPPPS-GPLHGEYLAEILDAGSLAANVLGWIGFTPFFPGAWIGKSFVEATDEKDGWGYNVFRWFGARLDRRFKMHTCITTSVWDGRPSFQLQYAGETHLLGRLRMRDEVREIQPGLYLGMGTFGYSEAKRRGDPLPFLLRGP---YQAPVPGAVRESFWP 241 LR L LF +L P+ + GEY A +L +L A V G + G W+ K+F DE G GYN F FG ++ +R+ M T + S +DG P++ L Y L G + M DEVR PG+YLGMGT+G+++A+RR P PFLL GP Y+ + G R F P Sbjct: 15 LRRLDTSGLLALFTTLEAPTIAEIDGEYTAALLAQPNLFAVVTGKVAVANPL-GPWLCKAF-RPVDENGGRGYNTFAEFG-QVRQRYPMRTLLAPSRYDGAPAYTLIYRAYASLCGSINMVDEVRRAAPGVYLGMGTWGFTDAQRR-VPRPFLLTGPVGSYRGDI-GKARHDFAP 184
BLAST of EWM27381.1 vs. NCBI_GenBank
Match: gi|1016416266|ref|WP_063055754.1| (hypothetical protein [Nocardia soli]) HSP 1 Score: 102.449 bits (254), Expect = 3.127e-23 Identity = 69/175 (39.43%), Postives = 94/175 (53.71%), Query Frame = 0 Query: 71 LRSASFPSLFYLFLSLPPPS-GPLHGEYLAEILDAGSLAANVLGWIGFTPFFPGAWIGKSFVEATDEKDGWGYNVFRWFGARLDRRFKMHTCITTSVWDGRPSFQLQYAGETHLLGRLRMRDEVREIQPGLYLGMGTFGYSEAKRRGDPLPFLLRGP---YQAPVPGAVRESFWP 241 LR L LF +L P+ + GEY A +L +L A V G + G W+ K+F DE G GYN F FG ++ +R+ M T + S +DG P++ L Y L G + M DEVR PG+YLGMGT+G+++A+RR P PFLL GP Y+ + G R F P Sbjct: 15 LRRLDTSGLLALFTTLEAPTIAEIDGEYTAALLAQPNLFAVVTGKVAVANPL-GPWLCKAF-RPVDENGGRGYNTFAEFG-QVRQRYPMRTLLAPSRYDGAPAYTLIYRAYASLCGSINMVDEVRRAAPGVYLGMGTWGFTDAQRR-VPRPFLLSGPVGSYRGDI-GEARHDFTP 184
BLAST of EWM27381.1 vs. NCBI_GenBank
Match: gi|1200114001|ref|WP_087551538.1| (hypothetical protein [Acinetobacter sp. WCHA52]) HSP 1 Score: 101.679 bits (252), Expect = 3.387e-23 Identity = 64/165 (38.79%), Postives = 86/165 (52.12%), Query Frame = 0 Query: 66 VTEYALRSASFPSLFYLFLSLPPPS-GPLHGEYLAEILDAGSLAANVLGWIGFTPFFPGAWIGKSFVEATDEKDGWGYNVFRWFGARLDRRFKMHTCITTSVWDGRPSFQLQYAGETHLLGRLRMRDEVREIQPGLYLGMGTFGYSEAKRRGDPLPFLLRGPYQA 229 +T +L S L +LF +L PS +HGEY A +L S A + G+I P W KSF E G GYN F R+ ++F M T I S +D +P +QL Y L + M DEVR+I LYLG+GT+G+SE K++ PF+L GP A Sbjct: 7 ITAVSLTKMSHQQLLHLFKTLDAPSINEMHGEYRATLLKQPSFIATLSGYIINNPIL--NWQTKSF-RPVSEDQGRGYNTF-LRKNRIIQKFPMQTVIAHSRYDAKPVYQLIYKSFHSLCADINMVDEVRKINEHLYLGIGTWGFSE-KQQHIAYPFMLEGPIHA 166 The following BLAST results are available for this feature:
BLAST of EWM27381.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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