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Properties
| Property Name | Value |
|---|
| Product | Nucleoside phosphorylase domain protein |
| Orig transcript id | gnl|cribi|Naga_100003g166.1807.mrna |
| Orig protein id | gnl|cribi|Naga_100003g166.1807 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:817145..819259 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna330 ID=rna330|Name=rna330|organism=Nannochloropsis gaditana|type=mRNA|length=2588bp
ACTCCCAATGCCACATGTTCGTGACGATAGCGGCGGTGCATAAGCGTTCA
AAGTCTTTGTGAGGTAGAGCGAGCACACTTATGTGTAATGCACATCCAAG
CACAGGTGCAGTGGCCGGGTTGAGAGCCGCTCTATCGGTACGCTCCATGG
GCACCCTCCCGCTCGTGTCCAAGGCCCCGTCTCGCAAGTCTTTCACGCTG
TCACTGAGGTCGTCGTTCATATTGATCGTGCTTGCGCTCATTACGCTCGT
CGGTGTGCAGGCTTTTACATTGCGCGCTCCGGCCGTGGCATACCCCATCC
GGGTGGCTTTCCAGGGCGAACCCGGCGCCTACTCGGAGAAAGCCTTGCGC
GAGCTCCTCGGACCGCACGTTTTGGCCACCGGCAAGCCATCTTTTGAGGA
CACGTTTAAGTCTGTCGCCACTCGGGAGGCTGATTATGCGGTCGTGCCGA
TTGAAAACTCTCTAGGGGGCTCCATACATGCCAATTACGATCTCCTCCTT
CGGCACGAGCTCCATATTATAGGCGAGCACGAATTCCGCGTGGAGCACTC
GCTTCTGGCGCTGCCGGGTGTTAAAAAGGAGGACATCAGGCGCGTTATGA
GCCATCCGCAGGCGCTAGCACAATGTGACGCCTACCTTCGTAATTGGGGC
GTGGCTCGGGAGTCCATGTATGATACTGCGGGCTCTGCCAAGGTCATAGC
CGAGCAAGGCTTGCGTGACTGCGCCGCCATTGCGTCAGAGCTAGCAGGCG
CCACCTATGGCCTTGATGTGCTTGACCAAAATATCGAGGACGACGACAGC
AATTTCACCCGCTTCCTGCTTCTCTCTCGGCAGTCCATCTCCTCCCTCAT
CCCTCACAGCGTGCCCGCCAAAACCTCCATCGTCTTCATCACCCCTAACA
CCCCCGGCGCTCTCTACAAAGCCCTGGCCTGCTTCACGCTCCGAGACATC
GATTTTTGTAAGATTGAGTCACGACCGACGTCCCCTCAACTCTTCCGCTT
TCTCCAGTTCCAACAGCGACAAATGAGAAGCTTCGCATCCGGGGGCGCGG
ACGCGGCCATGGGCTCGGGCGACGACCACGATTTGCCGCGTTTTCGTTAC
TGCTTTTACTTGGACTTCTTGGCCTCACAACTCGATGAGCCTGCGCGTAA
TGCCTTGCTGCAGCTTGAGGAGCAGTCTCAGTACGTGCGAGTGCTCGGCT
CGTTCCCGACGAAGGGCCAGCTCCTGGGCCCCATTCGGGAGGCGCTGGAC
CTGCTAGCCAAGGAGAGCGGGGAGGCAGCGGGCGTGCCCTTGAAGGCTGT
CGCGTCAAGGAGGGCGCAGGATCCTTCTGCAAAGACTCCTGACCGTCTCA
AGATCGGTGTTGTGGGCTTCGGAAAATTTGGTCAGTTTCTGACCAAGACT
TTTACCAAGTATCACGACGTGAGCGTAGTGAGCCGCGATGACATGACCTC
GGTTGCCGCCGACTTGGGCGTGCCATTCTTCCCCCTCTACGACGCGACGG
AATTCTTTCGGCAGGACCTGGACGTGGTCGTCCTCTCTGTCTCGATCCTG
GCCTTCGAGGAGGTGCTGACAAGCCTGCCCGCCGAGGCCCTCCGGGGCAA
ATTATTGGTCGACGTTCTGTCGGTAAAGGTGCACCCGAAGACGGTCATGC
TCGAGTCGCTCCCCGGGGACGTCGACATTATCTGTGCGCACCCCATGTTC
GGGCCGGAGTCGGGAAAATTTGGTTGGCAGGGTCTCCCTTTCGTCTACGA
GCGGGTCCGCATCCAGGACTTCGCCCGTGCCGAGCGCTTCCTGTCCATCT
TTGAGGTGGAGAGATGTAAGATGATCGAAATGAGCTGCGACACCCATGAC
AAGTATGCTGCTGACTCCCAATTTATCACGCACTTGACGGGTCGCATCCT
CGGTCAGCAAGGCTTGCAGCCCACCCCTATCGACACGCGTGGCTTCCAGA
GCGTCCTCAAGCTGGTCGACAATACTTGCCGCGACAGTTTCGACCTCTTC
TATGGTCTCTTCAAGTACAACAAGCATAGCTCCGACCAGATTCAGCGTCT
TCGCGAAGCATTTGCAAACGTAGAGCGCCAACTTGCCGCCAAAGAGGCCT
ATTTGGCTGCCCGCACCGAAATTATGCAGGACGAGCGAAAAAAGCTGTTC
GCGGAATGTCGCAGCCTCATCCGGGAGGCAGTAGCCCAGTCGACGAACCT
GCCCTCGTCATCCTCGAATATTCACCTGTCCTCTTCCCCCTCTGCCGGAC
CCCCACCTGCTTCGGCCTCCCCCTCGGACGCTGCGGATCCCAAGCCAGAA
GAGGCCTCCTCTATTACCCCTCCACCCCCCTCGGCGGCACAGTCACAAGA
AAACAAAGGCAACAGCACATCGGGCAAAGGCCGGCCATCGTCCCGCCTTT
CCCCCGTAGTGAAACCCACAGCGCCCCCCAAGCTATAGCGCCTCTGAGGC
AAAAATAAGATGGCTGTGTCGACCGAAAGGAGTCACCAGGACGGAGAAAT
TGCCATGGATAACAGGACAGTTGTATCACACGAGAGGGCACAAAGTAAAG
CGGACACCCTTAAAATGAATGACTAGCTCTTGTTTCAC back to topprotein sequence of rna330 >rna330-protein ID=rna330-protein|Name=rna330|organism=Nannochloropsis gaditana|type=polypeptide|length=270bp
MALRYSTRTQDSSSPFRSASPSPQVIMKGIKSIVITIAMEGEAMPLITKL
GLTQQSNYFGHAAPFHCFTGTYNNYNLAIVTNGKDRKFGCDNVGTVPAAL
ATYLAVEQLKPDLLINAGTAGGFESKGMAIGDVLISSTIHNHDRRMLLPI
FVDYGVHNHKAVETPRLREALKFKLGVVSTGNSLDHVEADDALMAANDAS
VKDMEAAAVAWAAELYSVPYFALKVVTDIVDGAHATEEEFVANFAMAQRR
LQEAVPATLDHVLGRSLEEL back to topmRNA from alignment at CM002455.1:817145..819259+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna330 ID=rna330|Name=rna330|organism=Nannochloropsis gaditana|type=mRNA|length=2115bp|location=Sequence derived from alignment at CM002455.1:817145..819259+ (Nannochloropsis gaditana)
TAGAGCGGCTCTCAACCCGGCCACTGCACCTGTGCTTGGATGTGCATTAC
ACATAAGTGTGCTCGCTCTACCTCACAAAGACTTTGAACGCTTATGCACC
GCCGCTATCGTCACGAACATGTGGCATTGGGAGTGCCGCCAACCCTCGCA
CGCCTGTCTTCCTCGCTAGAAGGCTCAGCGAGCGCAGGTACATGGCACTC
AGGTACTCCACACGCACACAGGACTCGTCGTCCCCTTTCCGGAGCGCGTC
ACCATCTCCGCAAGTAATTATGAAAGGTATCAAGTCAATCGTCATAACCA
TTGCCATGGAAGGTAAAGTGAAGCCGGAGGCCGGTATCCGTCAGCCatta
agggggggggaggtcgtgTTTGCAAAACTCCTACACGCGCTATGCCCAAG
TTTTTCGATCAACATCTATTTATTTTTTTCATAGCTTGCGTAGACAATAC
GGTCTTCAGTAAGTGTTGCGCATTAGCATTCAATTTCATTTTGTTCATCA
CATTCGGAAACACAGGCGAGGCCATGCCGCTCATCACGAAATTAGGTTTG
ACCCAGCAGTCCAATTATTTTGGACACGCAGCACCCTTTCACTGCTTCAC
TGGAACATACAACAACTACAACCTCGCAATTGTGACCAATGGAAAGGATC
GAAAGTTCGGATGTGACAACGTAAGACCGAGAATTGTGAGGCCCCTTCta
ccttcatccctcccctactCCTTCCATACTTAAGCCTCGCGTCCATGCAA
TAATAAACTCTACGTAATCGAATTATAGGTAGGCACAGTCCCTGCGGCAT
TGGCTACCTATTTGGCCGTGGAGCAACTCAAACCAGATCTGCTGATAAAT
GCAGGGACTGCGGGCGGCTTCGAGTCGAAAGGCATGGCCATAGGCGATGT
ACTCATAAGCAGTACAATCCATAATCACGACCGCCGCATGCTTTTGCCCA
TATTTGTCGACTATGGTGTTCACAATCATAAGGCTGTGGAAACTCCTCGC
CTGCGCGAGGTGAGCATGCATGAAGAAAgtgtgaagaggaaagaaagtag
ATAATTCCCGAAGACGTGCATGTTTTATGAGGATTGTGCGTGTACAAATA
AATGCTTTCATTGTCCTACCTACAGTAATAAGGACCGCTCATTCTCTACG
TGTAGGCCTTAAAATTCAAACTGGGAGTGGTGAGCACAGGCAACTCTTTG
GACCatgtggaggcggacgacgcCCTTATGGCGGCCAACGGTACGGAGTT
CGCTCGCCTCCGGACTGACGCGTGATTTATGTGCCACGCTATAGGCGCGA
GATCAGTCTTACGTGAACCTTTTGTGTCGTAACCCTGACAGATGCCTCCG
tcaaggacatggaggccgcGGCGGTGGCCTGGGCGGCAGAGCTTTACTCT
GTGCCCTACTTTGCCCTCAAAGTAGTGACGGATATCGGTAAGCGGGCACT
GTATAGCGCGGTTTCCTATCCCTTGCCCGTATCCGGGTGAATACAGTgtg
tggaaaaggggggaaagcatTGTTTGATGTTTGCGGAACTCGCACACTCA
TCGCCTTCGACATGcattatttttcttttcttcggCCACTCCCTGCAGTT
GACGGCGCACATGCCACTGAAGAAGAATTTGTCGCGAACTTCGCGATGGC
ACAAAGGCGACTACAAGAAGCCGTACCCGCGACACTCGACCATGTGTTGG
GCAGGTCTTTAGAGGAGCTATAAATAAGAAAACCTTGACTGTCTTGATGC
CTCAAGAGATTTTTTTAAATCAGTTTTTGCTTAACAGAAAGAGATGGGGT
CACATTTCGGAATGTTGCAAAGCTTGAATCGTTTGTCAAAGAAGTGTTTT
GTTTCAGTTATGGAGGATTTTGCCCCGTACCCAATTTTTTCACAAATATG
TTCAACAAAACCGTTTGAATGCAAGAATCAGACTGACACTGTAAGATCCA
GCAGCGATTTGCACGTGGAAATCACTTATAATTTTCTTGGCGCTAAATTA
GGCCCCTTTACGTGTATCGAACAACACATGCACTGCTGCTGTCGAGTATT
TTATGTCACCGCAACGGCCGTGCAAAAGAATCTGGCAGGCTCTCAGTAGG
AGGGCGGCTATTGCT back to topCoding sequence (CDS) from alignment at CM002455.1:817145..819259+ >rna330 ID=rna330|Name=rna330|organism=Nannochloropsis gaditana|type=CDS|length=4878bp|location=Sequence derived from alignment at CM002455.1:817145..819259+ (Nannochloropsis gaditana)
ATGGCACTCAGGTACTCCACACGCACACAGGACTCGTCGTCCCCTTTCCG
GAGCGCGTCACCATCTCCGCAAGTAATTATGAAAGGTATCAAGTCAATCG
TCATAACCATTGCCATGGAAGGCGAGGCCATGCCGCTCATCACGAAATTA
GGTTTGACCCAGCAGTCCAATTATTTTGGACACGCAGCACCCTTTCACTG
CTTCACTGGAACATACAACAACTACAACCTCGCAATTGTGACCAATGGAA
AGGATCGAAAGTTCGGATGTGACAACGTAGGCACAGTCCCTGCGGCATTG
GCTACCTATTTGGCCGTGGAGCAACTCAAACCAGATCTGCTGATAAATGC
AGGGACTGCGGGCGGCTTCGAGTCGAAAGGCATGGCCATAGGCGATGTAC
TCATAAGCAGTACAATCCATAATCACGACCGCCGCATGCTTTTGCCCATA
TTTGTCGACTATGGTGTTCACAATCATAAGGCTGTGGAAACTCCTCGCCT
GCGCGAGGCCTTAAAATTCAAACTGGGAGTGGTGAGCACAGGCAACTCTT
TGGACCatgtggaggcggacgacgcCCTTATGGCGGCCAACGATGCCTCC
GtcaaggacatggaggccgcGGCGGTGGCCTGGGCGGCAGAGCTTTACTC
TGTGCCCTACTTTGCCCTCAAAGTAGTGACGGATATCGTTGACGGCGCAC
ATGCCACTGAAGAAGAATTTGTCGCGAACTTCGCGATGGCACAAAGGCGA
CTACAAGAAGCCGTACCCGCGACACTCGACCATGTGTTGGGCAGGTCTTT
AGAGGAGCTATAAATGGCACTCAGGTACTCCACACGCACACAGGACTCGT
CGTCCCCTTTCCGGAGCGCGTCACCATCTCCGCAAGTAATTATGAAAGGT
ATCAAGTCAATCGTCATAACCATTGCCATGGAAGGCGAGGCCATGCCGCT
CATCACGAAATTAGGTTTGACCCAGCAGTCCAATTATTTTGGACACGCAG
CACCCTTTCACTGCTTCACTGGAACATACAACAACTACAACCTCGCAATT
GTGACCAATGGAAAGGATCGAAAGTTCGGATGTGACAACGTAGGCACAGT
CCCTGCGGCATTGGCTACCTATTTGGCCGTGGAGCAACTCAAACCAGATC
TGCTGATAAATGCAGGGACTGCGGGCGGCTTCGAGTCGAAAGGCATGGCC
ATAGGCGATGTACTCATAAGCAGTACAATCCATAATCACGACCGCCGCAT
GCTTTTGCCCATATTTGTCGACTATGGTGTTCACAATCATAAGGCTGTGG
AAACTCCTCGCCTGCGCGAGGCCTTAAAATTCAAACTGGGAGTGGTGAGC
ACAGGCAACTCTTTGGACCatgtggaggcggacgacgcCCTTATGGCGGC
CAACGATGCCTCCGtcaaggacatggaggccgcGGCGGTGGCCTGGGCGG
CAGAGCTTTACTCTGTGCCCTACTTTGCCCTCAAAGTAGTGACGGATATC
GTTGACGGCGCACATGCCACTGAAGAAGAATTTGTCGCGAACTTCGCGAT
GGCACAAAGGCGACTACAAGAAGCCGTACCCGCGACACTCGACCATGTGT
TGGGCAGGTCTTTAGAGGAGCTATAAATGGCACTCAGGTACTCCACACGC
ACACAGGACTCGTCGTCCCCTTTCCGGAGCGCGTCACCATCTCCGCAAGT
AATTATGAAAGGTATCAAGTCAATCGTCATAACCATTGCCATGGAAGGCG
AGGCCATGCCGCTCATCACGAAATTAGGTTTGACCCAGCAGTCCAATTAT
TTTGGACACGCAGCACCCTTTCACTGCTTCACTGGAACATACAACAACTA
CAACCTCGCAATTGTGACCAATGGAAAGGATCGAAAGTTCGGATGTGACA
ACGTAGGCACAGTCCCTGCGGCATTGGCTACCTATTTGGCCGTGGAGCAA
CTCAAACCAGATCTGCTGATAAATGCAGGGACTGCGGGCGGCTTCGAGTC
GAAAGGCATGGCCATAGGCGATGTACTCATAAGCAGTACAATCCATAATC
ACGACCGCCGCATGCTTTTGCCCATATTTGTCGACTATGGTGTTCACAAT
CATAAGGCTGTGGAAACTCCTCGCCTGCGCGAGGCCTTAAAATTCAAACT
GGGAGTGGTGAGCACAGGCAACTCTTTGGACCatgtggaggcggacgacg
cCCTTATGGCGGCCAACGATGCCTCCGtcaaggacatggaggccgcGGCG
GTGGCCTGGGCGGCAGAGCTTTACTCTGTGCCCTACTTTGCCCTCAAAGT
AGTGACGGATATCGTTGACGGCGCACATGCCACTGAAGAAGAATTTGTCG
CGAACTTCGCGATGGCACAAAGGCGACTACAAGAAGCCGTACCCGCGACA
CTCGACCATGTGTTGGGCAGGTCTTTAGAGGAGCTATAAATGGCACTCAG
GTACTCCACACGCACACAGGACTCGTCGTCCCCTTTCCGGAGCGCGTCAC
CATCTCCGCAAGTAATTATGAAAGGTATCAAGTCAATCGTCATAACCATT
GCCATGGAAGGCGAGGCCATGCCGCTCATCACGAAATTAGGTTTGACCCA
GCAGTCCAATTATTTTGGACACGCAGCACCCTTTCACTGCTTCACTGGAA
CATACAACAACTACAACCTCGCAATTGTGACCAATGGAAAGGATCGAAAG
TTCGGATGTGACAACGTAGGCACAGTCCCTGCGGCATTGGCTACCTATTT
GGCCGTGGAGCAACTCAAACCAGATCTGCTGATAAATGCAGGGACTGCGG
GCGGCTTCGAGTCGAAAGGCATGGCCATAGGCGATGTACTCATAAGCAGT
ACAATCCATAATCACGACCGCCGCATGCTTTTGCCCATATTTGTCGACTA
TGGTGTTCACAATCATAAGGCTGTGGAAACTCCTCGCCTGCGCGAGGCCT
TAAAATTCAAACTGGGAGTGGTGAGCACAGGCAACTCTTTGGACCatgtg
gaggcggacgacgcCCTTATGGCGGCCAACGATGCCTCCGtcaaggacat
ggaggccgcGGCGGTGGCCTGGGCGGCAGAGCTTTACTCTGTGCCCTACT
TTGCCCTCAAAGTAGTGACGGATATCGTTGACGGCGCACATGCCACTGAA
GAAGAATTTGTCGCGAACTTCGCGATGGCACAAAGGCGACTACAAGAAGC
CGTACCCGCGACACTCGACCATGTGTTGGGCAGGTCTTTAGAGGAGCTAT
AAATGGCACTCAGGTACTCCACACGCACACAGGACTCGTCGTCCCCTTTC
CGGAGCGCGTCACCATCTCCGCAAGTAATTATGAAAGGTATCAAGTCAAT
CGTCATAACCATTGCCATGGAAGGCGAGGCCATGCCGCTCATCACGAAAT
TAGGTTTGACCCAGCAGTCCAATTATTTTGGACACGCAGCACCCTTTCAC
TGCTTCACTGGAACATACAACAACTACAACCTCGCAATTGTGACCAATGG
AAAGGATCGAAAGTTCGGATGTGACAACGTAGGCACAGTCCCTGCGGCAT
TGGCTACCTATTTGGCCGTGGAGCAACTCAAACCAGATCTGCTGATAAAT
GCAGGGACTGCGGGCGGCTTCGAGTCGAAAGGCATGGCCATAGGCGATGT
ACTCATAAGCAGTACAATCCATAATCACGACCGCCGCATGCTTTTGCCCA
TATTTGTCGACTATGGTGTTCACAATCATAAGGCTGTGGAAACTCCTCGC
CTGCGCGAGGCCTTAAAATTCAAACTGGGAGTGGTGAGCACAGGCAACTC
TTTGGACCatgtggaggcggacgacgcCCTTATGGCGGCCAACGATGCCT
CCGtcaaggacatggaggccgcGGCGGTGGCCTGGGCGGCAGAGCTTTAC
TCTGTGCCCTACTTTGCCCTCAAAGTAGTGACGGATATCGTTGACGGCGC
ACATGCCACTGAAGAAGAATTTGTCGCGAACTTCGCGATGGCACAAAGGC
GACTACAAGAAGCCGTACCCGCGACACTCGACCATGTGTTGGGCAGGTCT
TTAGAGGAGCTATAAATGGCACTCAGGTACTCCACACGCACACAGGACTC
GTCGTCCCCTTTCCGGAGCGCGTCACCATCTCCGCAAGTAATTATGAAAG
GTATCAAGTCAATCGTCATAACCATTGCCATGGAAGGCGAGGCCATGCCG
CTCATCACGAAATTAGGTTTGACCCAGCAGTCCAATTATTTTGGACACGC
AGCACCCTTTCACTGCTTCACTGGAACATACAACAACTACAACCTCGCAA
TTGTGACCAATGGAAAGGATCGAAAGTTCGGATGTGACAACGTAGGCACA
GTCCCTGCGGCATTGGCTACCTATTTGGCCGTGGAGCAACTCAAACCAGA
TCTGCTGATAAATGCAGGGACTGCGGGCGGCTTCGAGTCGAAAGGCATGG
CCATAGGCGATGTACTCATAAGCAGTACAATCCATAATCACGACCGCCGC
ATGCTTTTGCCCATATTTGTCGACTATGGTGTTCACAATCATAAGGCTGT
GGAAACTCCTCGCCTGCGCGAGGCCTTAAAATTCAAACTGGGAGTGGTGA
GCACAGGCAACTCTTTGGACCatgtggaggcggacgacgcCCTTATGGCG
GCCAACGATGCCTCCGtcaaggacatggaggccgcGGCGGTGGCCTGGGC
GGCAGAGCTTTACTCTGTGCCCTACTTTGCCCTCAAAGTAGTGACGGATA
TCGTTGACGGCGCACATGCCACTGAAGAAGAATTTGTCGCGAACTTCGCG
ATGGCACAAAGGCGACTACAAGAAGCCGTACCCGCGACACTCGACCATGT
GTTGGGCAGGTCTTTAGAGGAGCTATAA back to top
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