EWM30290.1, cds330 (CDS) Nannochloropsis gaditana

Overview
NameEWM30290.1
Unique Namecds330
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:817336..817456 +
Alignment locationCM002455.1:817660..817814 +
Alignment locationCM002455.1:817923..818153 +
Alignment locationCM002455.1:818300..818384 +
Alignment locationCM002455.1:818486..818581 +
Alignment locationCM002455.1:818743..818867 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM30290.1
ProductNucleoside phosphorylase domain protein
Orig transcript idgnl|cribi|Naga_100003g166.1807.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:817336..817456 +
CM002455.1supercontigCM002455.1:817660..817814 +
CM002455.1supercontigCM002455.1:817923..818153 +
CM002455.1supercontigCM002455.1:818300..818384 +
CM002455.1supercontigCM002455.1:818486..818581 +
CM002455.1supercontigCM002455.1:818743..818867 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0009116nucleoside metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR018017Nucleoside_phosphorylase
IPR000845Nucleoside_phosphorylase_d
Homology
BLAST of EWM30290.1 vs. NCBI_GenBank
Match: gi|585112949|gb|EWM30290.1| (Nucleoside phosphorylase domain protein [Nannochloropsis gaditana])

HSP 1 Score: 560.066 bits (1442), Expect = 0.000e+0
Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0
Query:    1 MALRYSTRTQDSSSPFRSASPSPQVIMKGIKSIVITIAMEGEAMPLITKLGLTQQSNYFGHAAPFHCFTGTYNNYNLAIVTNGKDRKFGCDNVGTVPAALATYLAVEQLKPDLLINAGTAGGFESKGMAIGDVLISSTIHNHDRRMLLPIFVDYGVHNHKAVETPRLREALKFKLGVVSTGNSLDHVEADDALMAANDASVKDMEAAAVAWAAELYSVPYFALKVVTDIVDGAHATEEEFVANFAMAQRRLQEAVPATLDHVLGRSLEEL 270
            MALRYSTRTQDSSSPFRSASPSPQVIMKGIKSIVITIAMEGEAMPLITKLGLTQQSNYFGHAAPFHCFTGTYNNYNLAIVTNGKDRKFGCDNVGTVPAALATYLAVEQLKPDLLINAGTAGGFESKGMAIGDVLISSTIHNHDRRMLLPIFVDYGVHNHKAVETPRLREALKFKLGVVSTGNSLDHVEADDALMAANDASVKDMEAAAVAWAAELYSVPYFALKVVTDIVDGAHATEEEFVANFAMAQRRLQEAVPATLDHVLGRSLEEL
Sbjct:    1 MALRYSTRTQDSSSPFRSASPSPQVIMKGIKSIVITIAMEGEAMPLITKLGLTQQSNYFGHAAPFHCFTGTYNNYNLAIVTNGKDRKFGCDNVGTVPAALATYLAVEQLKPDLLINAGTAGGFESKGMAIGDVLISSTIHNHDRRMLLPIFVDYGVHNHKAVETPRLREALKFKLGVVSTGNSLDHVEADDALMAANDASVKDMEAAAVAWAAELYSVPYFALKVVTDIVDGAHATEEEFVANFAMAQRRLQEAVPATLDHVLGRSLEEL 270          
BLAST of EWM30290.1 vs. NCBI_GenBank
Match: gi|299115146|emb|CBN75513.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 261.151 bits (666), Expect = 4.216e-84
Identity = 122/229 (53.28%), Postives = 160/229 (69.87%), Query Frame = 0
Query:   42 EAMPLITKLGLTQQSNYFGHAAPFHCFTGTYNNYNLAIVTNGKDRKFGCDNVGTVPAALATYLAVEQLKPDLLINAGTAGGFESKGMAIGDVLISSTIHNHDRRMLLPIFVDYGVHNHKAVETPRLREALKFKLGVVSTGNSLDHVEADDALMAANDASVKDMEAAAVAWAAELYSVPYFALKVVTDIVDGAHATEEEFVANFAMAQRRLQEAVPATLDHVLGRSLEEL 270
            EA PLI +LGL +  + F  AAP  CF+G+Y    + +VTNGK  +FG D +GTV A L+T+L+VE +KPD++INAGTAGGF+    AIGDV IS+++ NHDRR+ +P F ++G+ NH++   P + + L FK GVV+TG+S DH E DD +M  NDA VKDMEAAAVAWA E +  P F +KVVTD+VDG    EEEF+ N   A   LQEA+P  LD VL R L++L
Sbjct:   19 EACPLIERLGLVEDPDKFPAAAPSKCFSGSYQGAAINVVTNGKCSRFGVDQIGTVAAGLSTWLSVEAIKPDIVINAGTAGGFKKHDTAIGDVFISTSVKNHDRRIPIPGFKEFGIGNHESHPAPEMLKELGFKQGVVTTGSSFDHTETDDKMMEENDARVKDMEAAAVAWACEQHGTPLFCIKVVTDLVDGGGVGEEEFLQNLKAASDSLQEAMPRVLDFVLARRLDDL 247          
BLAST of EWM30290.1 vs. NCBI_GenBank
Match: gi|219123980|ref|XP_002182292.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217406253|gb|EEC46193.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 251.521 bits (641), Expect = 3.253e-80
Identity = 132/261 (50.57%), Postives = 172/261 (65.90%), Query Frame = 0
Query:   16 FRSASPSPQVIMKGIKSIVITIAMEGEAMPLITKLGLTQQSNYFGHAAPFHCFTGTYNNYNLAIVTNGKDRKF--GCDNVGTVPAALATYLAVEQLK--PDL-LINAGTAGGFESKGMAIGDVLISSTIHNHDRRMLLPIFVDYGVHN-HKAVETPRLREALKFKLGVVSTGNSLDHVEADDALMAANDASVKDMEAAAVAWAAELYSVPYFALKVVTDIVDGAHATEEEFVANFAMAQRRLQEAVPATLDHVLGRSLEEL 270
             R A+ SP        S++I IAME EA P +  L L +  N+F    PFH F+GT+N   + +VTNGKD  +  G DN GTVPAA+ ++LA+E+LK  P L LINAGT GGF+ KG AIGDV +++ + NHDRR+ +P F+ YGV      V    +  AL FK GV +TGNSLD  E DD  M ANDASVKDMEAAA+AW+  L+ VPY  LKVVTDIVDG  AT++EF+ N   A + LQ+A+P  L++++G+   EL
Sbjct:    7 IRLATTSPT------NSVLIVIAMEAEAKPFVEHLDLLKDDNFFPSHVPFHAFSGTHNGSRVTVVTNGKDHIYETGVDNCGTVPAAVVSFLALEKLKDVPSLVLINAGTCGGFQRKGAAIGDVFLTTGVANHDRRIPIPDFIPYGVGKLDTKVSVLNMAAALGFKTGVCTTGNSLDKTEEDDKHMLANDASVKDMEAAAIAWSCALHQVPYLGLKVVTDIVDGNFATQDEFLENLHTASQSLQKALPNVLEYIVGKQHHEL 261          
BLAST of EWM30290.1 vs. NCBI_GenBank
Match: gi|1173812540|ref|XP_020551414.1| (5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1-like [Sesamum indicum])

HSP 1 Score: 234.572 bits (597), Expect = 1.960e-73
Identity = 122/268 (45.52%), Postives = 171/268 (63.81%), Query Frame = 0
Query:    4 RYSTRTQDSSSPFRSASPSPQVIMKGIKSIVITIAMEGEAMPLITKLGLTQQSN-YFGHAAPFHCFTGTYNNYNLAIVTNGKDRKFGCDNVGTVPAALATYLAVEQLKPDLLINAGTAGGFESKGMAIGDVLISSTIHNHDRRMLLPIFVDYGVHNHKAVETPRLREALKFKLGVVSTGNSLDHVEADDALMAANDASVKDMEAAAVAWAAELYSVPYFALKVVTDIVDGAHATEEEFVANFAMAQRRLQEAVPATLDHVLGRSLEEL 270
            + +++    S+P RS           I S++  IAM+ EA+PL+ K  L +QS+  F    P+  ++G Y + N+ I+  GKD+KFG D+VGTV A+L TY +V+ L+PDL+INAGTAGGF++KG +IGDV + S +  HDRR+ +P+   YGV   +A  TP L + LK K+G +STG+SLD    D A++ AN A+VKDME AAVA+AA+L  VP   LK VTDIVDG   T EEF+ N A     L +AV   +D + G++  EL
Sbjct:    8 KKASKVNQESTPKRS-----------ISSVLFVIAMQTEALPLVDKFQLAEQSDSLFPEGVPWMRYSGKYKDLNINILCPGKDKKFGVDSVGTVSASLLTYASVQALQPDLIINAGTAGGFKAKGASIGDVYLVSDVAFHDRRIPVPVLDLYGVGARQAFPTPNLVKELKLKVGKLSTGDSLDMTPQDAAMILANSATVKDMEGAAVAYAADLLKVPVIFLKAVTDIVDGDKPTAEEFLQNLAAVVAALDKAVTKVVDFINGKTFSEL 264          
BLAST of EWM30290.1 vs. NCBI_GenBank
Match: gi|1098818334|ref|XP_018815344.1| (PREDICTED: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1-like isoform X1 [Juglans regia])

HSP 1 Score: 232.646 bits (592), Expect = 9.942e-73
Identity = 112/243 (46.09%), Postives = 159/243 (65.43%), Query Frame = 0
Query:   28 KGIKSIVITIAMEGEAMPLITKLGLTQQSNYFGHAAPFHCFTGTYNNYNLAIVTNGKDRKFGCDNVGTVPAALATYLAVEQLKPDLLINAGTAGGFESKGMAIGDVLISSTIHNHDRRMLLPIFVDYGVHNHKAVETPRLREALKFKLGVVSTGNSLDHVEADDALMAANDASVKDMEAAAVAWAAELYSVPYFALKVVTDIVDGAHATEEEFVANFAMAQRRLQEAVPATLDHVLGRSLEEL 270
            + I SI+I IAM+ EA+PL+ K  LT++ +      P+ C+ G Y N N+ ++  GKD   G D+VGTV A+L TY +++ LKPDL+INAGTAGGF++KG ++GDV ++S    HDRR+ +P+F  YG+   +A  +P L + L  K+G +STG+SLD    D+A + ANDA++KDME AAVA+ A+L  VP   +K VTDIVDG   T EEF+ N       L +AV   LD + G+ L +L
Sbjct:   19 RPISSILIIIAMQAEALPLVNKFQLTEELSMLPKGVPWVCYRGIYKNLNINLIWPGKDLSLGVDSVGTVSASLVTYASIQALKPDLIINAGTAGGFKAKGASVGDVFLASACAFHDRRIPIPVFDMYGIGLRQAFSSPNLLKELNLKVGKLSTGDSLDMSPQDEASIVANDATIKDMEGAAVAYVADLLKVPAIFVKAVTDIVDGEKPTAEEFLQNLVAVTAALDQAVTQVLDFINGKCLSQL 261          
BLAST of EWM30290.1 vs. NCBI_GenBank
Match: gi|1210515286|dbj|GAX25738.1| (5'-methylthioadenosine nucleosidase [Fistulifera solaris])

HSP 1 Score: 232.261 bits (591), Expect = 3.131e-72
Identity = 117/242 (48.35%), Postives = 162/242 (66.94%), Query Frame = 0
Query:   30 IKSIVITIAMEGEAMPLITKLGLTQQSNYFGHAAPFHCFTGTYNNYNLAIVTNGKD--RKFGCDNVGTVPAALATYLAVEQL-KPDLLINAGTAGGFESKGMAIGDVLISSTIHNHDRRMLLPIFVDYGV-----HNHKAVETPR-LREALKFKLGVVSTGNSLDHVEADDALMAANDASVKDMEAAAVAWAAELYSVPYFALKVVTDIVDGAHATEEEFVANFAMAQRRLQEAVPATLDHV 262
            +K++++ IAME EA P I  L L   +++F    PF  + G + +  + ++TNGKD   + G DNVGTVPAALAT+LA+++L + D+LINAGT GGF  KG  +G+V + + + +HDRR+ +P FV YG+       H    T   L   L++KLGV +TGNSLD  E DD  M ANDA+VKDMEAAA+AW+ +L+  P+  LKVVTDIVDG H T++EF+AN   A + LQ A+P  LDH+
Sbjct:   36 VKNVIVAIAMEAEAAPFIQHLQLKLVADFFPSNTPFQAYQGPHGDCTVTVITNGKDTVHETGVDNVGTVPAALATFLALQKLPETDILINAGTCGGFRRKGAEVGNVFVVTGVAHHDRRIPIPDFVPYGIGKLDTSRHGDFTTAEVLALELEYKLGVCTTGNSLDKTEEDDKHMLANDAAVKDMEAAAIAWSCKLFDTPFLGLKVVTDIVDGEHPTQDEFLANLLAASQSLQVALPRVLDHI 277          
BLAST of EWM30290.1 vs. NCBI_GenBank
Match: gi|696005064|gb|AIT39704.1| (5'-methylthioadenosine nucleosidase [Robinia pseudoacacia])

HSP 1 Score: 231.106 bits (588), Expect = 4.056e-72
Identity = 119/261 (45.59%), Postives = 168/261 (64.37%), Query Frame = 0
Query:   11 DSSSPFRSASPSPQVIMKGIKSIVITIAMEGEAMPLITKLGLTQQSNY-FGHAAPFHCFTGTYNNYNLAIVTNGKDRKFGCDNVGTVPAALATYLAVEQLKPDLLINAGTAGGFESKGMAIGDVLISSTIHNHDRRMLLPIFVDYGVHNHKAVETPRLREALKFKLGVVSTGNSLDHVEADDALMAANDASVKDMEAAAVAWAAELYSVPYFALKVVTDIVDGAHATEEEFVANFAMAQRRLQEAVPATLDHVLGRSLEEL 270
            ++ +P  +    PQ   + I ++VI IAM+ EA+P++ +L LT+  N  F    P+  + GTY   N+ ++  GKD   G D+VGT+ +AL TY A++ L+PDL+INAGTAGGF++KG +IGD+ I S    HDRR+ +P+F  YGV   KA ETP L + L  K+G +STG+SLD  + D++ + ANDA+VKDME AAVA+ A+L  VP   +K VTDIVDG   T EEF+ N A     L  AV   ++ + G+SL EL
Sbjct:    9 EAPAPEEAMVTEPQPQKRPISNVVIVIAMQTEALPVVNRLQLTEDPNSPFPQGVPWVRYHGTYKGLNINLIWPGKDSALGVDSVGTISSALVTYAAIQALQPDLIINAGTAGGFKAKGASIGDIFIISDCAFHDRRIPIPVFDLYGVGLRKAFETPNLVKELNLKVGKLSTGDSLDMTQQDESSIIANDATVKDMEGAAVAYVADLLKVPAIFVKAVTDIVDGDKPTAEEFLQNLAAVTAALDLAVEQVINFINGKSLSEL 269          
BLAST of EWM30290.1 vs. NCBI_GenBank
Match: gi|1210525742|dbj|GAX15348.1| (5'-methylthioadenosine nucleosidase [Fistulifera solaris])

HSP 1 Score: 231.106 bits (588), Expect = 8.692e-72
Identity = 117/242 (48.35%), Postives = 161/242 (66.53%), Query Frame = 0
Query:   30 IKSIVITIAMEGEAMPLITKLGLTQQSNYFGHAAPFHCFTGTYNNYNLAIVTNGKD--RKFGCDNVGTVPAALATYLAVEQL-KPDLLINAGTAGGFESKGMAIGDVLISSTIHNHDRRMLLPIFVDYGV-----HNHKAVETPR-LREALKFKLGVVSTGNSLDHVEADDALMAANDASVKDMEAAAVAWAAELYSVPYFALKVVTDIVDGAHATEEEFVANFAMAQRRLQEAVPATLDHV 262
            +K++++ IAME EA P I  L L   +++F    PF  + G + +  + ++TNGKD   + G DNVGTVPAALAT+LA+++L   D+LINAGT GGF  KG  IG+V + + + +HDRR+ +P +V YG+       H    T   L   L++KLGV +TGNSLD  E DD  M ANDA+VKDMEAAA+AW+ +L+  P+  LKVVTDIVDG H T++EF+AN   A + LQ A+P  LDH+
Sbjct:   36 VKNVIVAIAMEAEAAPFIQHLQLKLVADFFPSNTPFQAYQGPHGDCTVTVITNGKDTVHETGVDNVGTVPAALATFLALQKLPDTDILINAGTCGGFRRKGAEIGNVFVVTGVAHHDRRIPIPDYVPYGIGKLDTSRHGDFTTAEVLALELEYKLGVCTTGNSLDKTEEDDKHMLANDAAVKDMEAAAIAWSCKLFDTPFLGLKVVTDIVDGEHPTQDEFLANLLAASQSLQVALPRVLDHI 277          
BLAST of EWM30290.1 vs. NCBI_GenBank
Match: gi|1026081278|ref|XP_016539895.1| (PREDICTED: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2-like [Capsicum annuum])

HSP 1 Score: 229.18 bits (583), Expect = 2.389e-71
Identity = 124/266 (46.62%), Postives = 162/266 (60.90%), Query Frame = 0
Query:    6 STRTQDSSSPFRSASPSPQVIMKGIKSIVITIAMEGEAMPLITKLGLTQQ-SNYFGHAAPFHCFTGTYNNYNLAIVTNGKDRKFGCDNVGTVPAALATYLAVEQLKPDLLINAGTAGGFESKGMAIGDVLISSTIHNHDRRMLLPIFVDYGVHNHKAVETPRLREALKFKLGVVSTGNSLDHVEADDALMAANDASVKDMEAAAVAWAAELYSVPYFALKVVTDIVDGAHATEEEFVANFAMAQRRLQEAVPATLDHVLGRSLEEL 270
            ST  ++  S   S    P      I +IV  IAM+ EA+PL+ K  LT+   + F    P+  F G Y  + + IV  GKD   G D VGTV  +L TY +V+ LKPDL+INAGTAGGF +KG +IGDV +SS +  HDRR+ +P+F  YGV + KA  TP L + L  K+G +STG+SLD    D+A + ANDA+VKDME AAVA+ A+L  VP   LK VTDIVDG   T EEF+AN A     L +     +D++ G+ L EL
Sbjct:    9 STEVKEEPSAVSSVDNRP------ISTIVFIIAMQTEALPLVNKFQLTEDVDSVFPKGVPWVRFYGNYKGFAINIVCPGKDPALGVDGVGTVSISLVTYASVQALKPDLIINAGTAGGFGAKGASIGDVFLSSEVAFHDRRIPIPVFDIYGVGSRKAFATPNLLKELNLKVGKLSTGDSLDMSPVDEAAIVANDATVKDMEGAAVAYVADLLKVPVIFLKAVTDIVDGDKPTPEEFLANLAAVTAALDQTATQVVDYISGKCLLEL 268          
BLAST of EWM30290.1 vs. NCBI_GenBank
Match: gi|950965023|ref|XP_014498734.1| (PREDICTED: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2-like [Vigna radiata var. radiata])

HSP 1 Score: 228.024 bits (580), Expect = 7.242e-71
Identity = 115/244 (47.13%), Postives = 161/244 (65.98%), Query Frame = 0
Query:   28 KGIKSIVITIAMEGEAMPLITKLGLTQQSNY-FGHAAPFHCFTGTYNNYNLAIVTNGKDRKFGCDNVGTVPAALATYLAVEQLKPDLLINAGTAGGFESKGMAIGDVLISSTIHNHDRRMLLPIFVDYGVHNHKAVETPRLREALKFKLGVVSTGNSLDHVEADDALMAANDASVKDMEAAAVAWAAELYSVPYFALKVVTDIVDGAHATEEEFVANFAMAQRRLQEAVPATLDHVLGRSLEEL 270
            K I +IVI IAM+ EA+P++ +  LT++ N  F    P+  + GTY N NL+++  GKD   G D+VGT+ +AL TY A++ L+PDL+INAGTAGGF++KG +IGDV I S    HDRR+ +P+F  YGV   KA E P L + L  K+  +STG+SLD    D++ + ANDA++KDME AA+A+ AEL  VP   +K VTDI+DG   T EEF+ N A    +L  AV   ++ + G+S+ EL
Sbjct:   25 KPISNIVIIIAMQTEALPIVNRFQLTEEPNSPFPQGVPWVRYRGTYKNLNLSLIWPGKDPVLGVDSVGTISSALVTYAAIQTLQPDLIINAGTAGGFKAKGASIGDVFIVSDCAFHDRRIPIPVFDLYGVGLRKAFEAPNLVKELNLKVAKLSTGDSLDMSPQDESSIIANDATLKDMEGAAIAYVAELLKVPAVFVKAVTDIIDGDKPTAEEFLQNLAAVTAKLDLAVEKVINFINGKSIAEL 268          
The following BLAST results are available for this feature:
BLAST of EWM30290.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112949|gb|EWM30290.1|0.000e+0100.00Nucleoside phosphorylase domain protein [Nannochlo... [more]
gi|299115146|emb|CBN75513.1|4.216e-8453.28conserved unknown protein [Ectocarpus siliculosus][more]
gi|219123980|ref|XP_002182292.1|3.253e-8050.57predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|1173812540|ref|XP_020551414.1|1.960e-7345.525'-methylthioadenosine/S-adenosylhomocysteine nucl... [more]
gi|1098818334|ref|XP_018815344.1|9.942e-7346.09PREDICTED: 5'-methylthioadenosine/S-adenosylhomocy... [more]
gi|1210515286|dbj|GAX25738.1|3.131e-7248.355'-methylthioadenosine nucleosidase [Fistulifera s... [more]
gi|696005064|gb|AIT39704.1|4.056e-7245.595'-methylthioadenosine nucleosidase [Robinia pseud... [more]
gi|1210525742|dbj|GAX15348.1|8.692e-7248.355'-methylthioadenosine nucleosidase [Fistulifera s... [more]
gi|1026081278|ref|XP_016539895.1|2.389e-7146.62PREDICTED: 5'-methylthioadenosine/S-adenosylhomocy... [more]
gi|950965023|ref|XP_014498734.1|7.242e-7147.13PREDICTED: 5'-methylthioadenosine/S-adenosylhomocy... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna330rna330Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications