rna3297, rna3297 (mRNA) Nannochloropsis gaditana

Overview
Namerna3297
Unique Namerna3297
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length456
Alignment locationCM002461.1:30780..32092 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100328g4.172.mrna
Orig protein idgnl|cribi|Naga_100328g4.172
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:30780..32092 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100328g4gene3174Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna3297rna3297-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM27382.1cds3288Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna3297 ID=rna3297|Name=rna3297|organism=Nannochloropsis gaditana|type=mRNA|length=456bp
ATGCTACTGCCGGCTTGGAGGGAGAGAGGGAGGAGGAGATGGAGGGTGAG
AAAGATGCTACTTCCGGAGTCTCCTACACGCTTTTGGGTAGTGCCGGCGT
CATCGCCCCCTCGGGCCAGGCGTACATCACGCAAGTGTACGGTGCATCTG
GATAATCTCATGCTTCTCAAGCATATTACTTCTGACGTCAATGGAATAAT
TATCAAAAAGCGAATCGAAGGTCTTCGATATCGCGTGTCATGCTTACCAC
ATGTCAGGAGCGACACGAAGGAATATATAATTCATGGGGAAACAAGAAAA
GAAGAGGGGCCTGTCTTGGAGAAGCATTTGCAGGGGGATATTATGACCTT
CGGTGTGCACTTCTATTCCGGGTACACTCATGAGCCAAAAAGAGGCGAGG
GAGTCGATTCTCTTCAACGTTCAGTCAGACTTTTAAATGTGAGAGAGGCT
CACTAG
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protein sequence of rna3297

>rna3297-protein ID=rna3297-protein|Name=rna3297|organism=Nannochloropsis gaditana|type=polypeptide|length=239bp
MRVLSLTLLASTLSLAAGHQTLRGLVSWAGEEIGGRGASKDAFAGLEDPM
RQATDTVRAKNGMEPLTSDLSLSRTALYLATELGKKDQKEAEVSPELEKA
LLERAKAYGFAGTSVKAQVFTYDAKAMGLTAKDSEAHALAAVNYWTSKDA
TAGLEGEREEEMEDEDKDATAGLEEGEAEEEIEDEDEDEDEDEDEDEDED
EDEDEDEDDEDKDATAGLEEGEAEEEIEDEDEDEDEDEE
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mRNA from alignment at CM002461.1:30780..32092-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna3297 ID=rna3297|Name=rna3297|organism=Nannochloropsis gaditana|type=mRNA|length=1313bp|location=Sequence derived from alignment at CM002461.1:30780..32092- (Nannochloropsis gaditana)
CAGGGTGAAGGTCGTAAATTTTAGGGGCGACGTAGAGCATGCTTCCGCGG
CCGGGACATTTATTGAGCACGATGGATTGGCTTTCAACACGATTTTACGG
GTGATCTGAGTCATCATCTTGTAAAGGGTCCGCTTTCGTGCCAAGTTGGT
CGTACATCAACTTGACATGGTACACACGAACGGAACATCTCTTACCTTGT
TGCCTCACTCCTCTTCTTTGACGCTCTTCTCGTTTTTACGTTGTACAGAC
ACTTTCACACCATAATCATGCGTGTCCTCTCTCTTACGCTACTGGCATCG
ACACTTTCTCTTGCCGCAGGCCATCAGGTGAGAAAATCGAAACTACAGCG
AGATGCGATAGAAGGGAAGGACTCACACACCTTCTTCTTAAGGCATTCAT
TTCAATCATTCGTTCCTTACAAATTTTGACTTTTTCATACACCTACGGTA
CAGACACTGCGCGGCCTTGTTTCCTGGGCTGGTGAGGAGATCGGTGGCCG
TGGTGCTTGTAAGTCATGTGGATCCTTGCGAACGCTGTTATTTTGTCGGG
CAGGAATCTACACACAGCAGCAGCACACCACTCACGACTTTTCCTTCTGG
GTATATTATTTAATCTTTTTCACACCTCCCACTACAGCCAAAGACGCCTT
CGCGGGCCTCGAGGATCCCATGCGGCAGGCCACTGACACCGTACGGGCCA
AGAATGGGATGGAGCCCCTCACGTCGGACTTGAGCCTTTCACGTACCGCG
CTTTACCTGGCCACGGAGCTGGGCAAGAAAGATCAGAAGGAAGCAGAAGT
GAGCCCAGAGTTGGAAAAAGCTTTGTTGGAACGTGCCAAGGCCTACGGGT
TCGCGGTAAGGCGGGGAAAGGAAAAAAAGGTTCTTGTTTTGGACTCCATC
TCACCTCCGGTTTCATTCATATCGCAGGGCACGTCCGTGAAGGCCCAAGT
TTTCACCTACGACGCCAAGGCCATGGGCCTGACGGCCAAGGATTCGGAGG
CTCATGCCCTCGCCGCGGTAAACTACTGGACGAGCAAGGATGCCACTGCC
GGCTTGGAGGGAGAGAGGGAGGAGGAGATGGAGGATGAGGACAAGGACGC
TACTGCCGGTCTTGAAGAAGGTGAGGCCGAAGAGGAGATTGAGGACGAGG
ACGAGGACGAGGATGAGGACGAGGATGAGGACGAGGATGAAGATGAAGAT
GAAGACGAGGATGAAGATGATGAGGACAAGGACGCTACCGCCGGTCTTGA
AGAAGGTGAGGCTGAAGAGGAGATTGAGGACGAGGACGAGGATGAGGACG
AGGATGAGGAAAA
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Coding sequence (CDS) from alignment at CM002461.1:30780..32092-

>rna3297 ID=rna3297|Name=rna3297|organism=Nannochloropsis gaditana|type=CDS|length=2876bp|location=Sequence derived from alignment at CM002461.1:30780..32092- (Nannochloropsis gaditana)
GGCACGTCCGTGAAGGCCCAAGTTTTCACCTACGACGCCAAGGCCATGGG
CCTGACGGCCAAGGATTCGGAGGCTCATGCCCTCGCCGCGGTAAACTACT
GGACGAGCAAGGATGCCACTGCCGGCTTGGAGGGAGAGAGGGAGGAGGAG
ATGGAGGATGAGGACAAGGACGCTACTGCCGGTCTTGAAGAAGGTGAGGC
CGAAGAGGAGATTGAGGACGAGGACGAGGACGAGGATGAGGACGAGGATG
AGGACGAGGATGAAGATGAAGATGAAGACGAGGATGAAGATGATGAGGAC
AAGGACGCTACCGCCGGTCTTGAAGAAGGTGAGGCTGAAGAGGAGATTGA
GGACGAGGACGAGGATGAGGACGAGGATGAGGAAAACCAAAGACGCCTTC
GCGGGCCTCGAGGATCCCATGCGGCAGGCCACTGACACCGTACGGGCCAA
GAATGGGATGGAGCCCCTCACGTCGGACTTGAGCCTTTCACGTACCGCGC
TTTACCTGGCCACGGAGCTGGGCAAGAAAGATCAGAAGGAAGCAGAAGTG
AGCCCAGAGTTGGAAAAAGCTTTGTTGGAACGTGCCAAGGCCTACGGGTT
CGCGACACTGCGCGGCCTTGTTTCCTGGGCTGGTGAGGAGATCGGTGGCC
GTGGTGCTTATGCGTGTCCTCTCTCTTACGCTACTGGCATCGACACTTTC
TCTTGCCGCAGGCCATCAGGGCACGTCCGTGAAGGCCCAAGTTTTCACCT
ACGACGCCAAGGCCATGGGCCTGACGGCCAAGGATTCGGAGGCTCATGCC
CTCGCCGCGGTAAACTACTGGACGAGCAAGGATGCCACTGCCGGCTTGGA
GGGAGAGAGGGAGGAGGAGATGGAGGATGAGGACAAGGACGCTACTGCCG
GTCTTGAAGAAGGTGAGGCCGAAGAGGAGATTGAGGACGAGGACGAGGAC
GAGGATGAGGACGAGGATGAGGACGAGGATGAAGATGAAGATGAAGACGA
GGATGAAGATGATGAGGACAAGGACGCTACCGCCGGTCTTGAAGAAGGTG
AGGCTGAAGAGGAGATTGAGGACGAGGACGAGGATGAGGACGAGGATGAG
GAAAACCAAAGACGCCTTCGCGGGCCTCGAGGATCCCATGCGGCAGGCCA
CTGACACCGTACGGGCCAAGAATGGGATGGAGCCCCTCACGTCGGACTTG
AGCCTTTCACGTACCGCGCTTTACCTGGCCACGGAGCTGGGCAAGAAAGA
TCAGAAGGAAGCAGAAGTGAGCCCAGAGTTGGAAAAAGCTTTGTTGGAAC
GTGCCAAGGCCTACGGGTTCGCGACACTGCGCGGCCTTGTTTCCTGGGCT
GGTGAGGAGATCGGTGGCCGTGGTGCTTATGCGTGTCCTCTCTCTTACGC
TACTGGCATCGACACTTTCTCTTGCCGCAGGCCATCAGGGCACGTCCGTG
AAGGCCCAAGTTTTCACCTACGACGCCAAGGCCATGGGCCTGACGGCCAA
GGATTCGGAGGCTCATGCCCTCGCCGCGGTAAACTACTGGACGAGCAAGG
ATGCCACTGCCGGCTTGGAGGGAGAGAGGGAGGAGGAGATGGAGGATGAG
GACAAGGACGCTACTGCCGGTCTTGAAGAAGGTGAGGCCGAAGAGGAGAT
TGAGGACGAGGACGAGGACGAGGATGAGGACGAGGATGAGGACGAGGATG
AAGATGAAGATGAAGACGAGGATGAAGATGATGAGGACAAGGACGCTACC
GCCGGTCTTGAAGAAGGTGAGGCTGAAGAGGAGATTGAGGACGAGGACGA
GGATGAGGACGAGGATGAGGAAAACCAAAGACGCCTTCGCGGGCCTCGAG
GATCCCATGCGGCAGGCCACTGACACCGTACGGGCCAAGAATGGGATGGA
GCCCCTCACGTCGGACTTGAGCCTTTCACGTACCGCGCTTTACCTGGCCA
CGGAGCTGGGCAAGAAAGATCAGAAGGAAGCAGAAGTGAGCCCAGAGTTG
GAAAAAGCTTTGTTGGAACGTGCCAAGGCCTACGGGTTCGCGACACTGCG
CGGCCTTGTTTCCTGGGCTGGTGAGGAGATCGGTGGCCGTGGTGCTTATG
CGTGTCCTCTCTCTTACGCTACTGGCATCGACACTTTCTCTTGCCGCAGG
CCATCAGGGCACGTCCGTGAAGGCCCAAGTTTTCACCTACGACGCCAAGG
CCATGGGCCTGACGGCCAAGGATTCGGAGGCTCATGCCCTCGCCGCGGTA
AACTACTGGACGAGCAAGGATGCCACTGCCGGCTTGGAGGGAGAGAGGGA
GGAGGAGATGGAGGATGAGGACAAGGACGCTACTGCCGGTCTTGAAGAAG
GTGAGGCCGAAGAGGAGATTGAGGACGAGGACGAGGACGAGGATGAGGAC
GAGGATGAGGACGAGGATGAAGATGAAGATGAAGACGAGGATGAAGATGA
TGAGGACAAGGACGCTACCGCCGGTCTTGAAGAAGGTGAGGCTGAAGAGG
AGATTGAGGACGAGGACGAGGATGAGGACGAGGATGAGGAAAACCAAAGA
CGCCTTCGCGGGCCTCGAGGATCCCATGCGGCAGGCCACTGACACCGTAC
GGGCCAAGAATGGGATGGAGCCCCTCACGTCGGACTTGAGCCTTTCACGT
ACCGCGCTTTACCTGGCCACGGAGCTGGGCAAGAAAGATCAGAAGGAAGC
AGAAGTGAGCCCAGAGTTGGAAAAAGCTTTGTTGGAACGTGCCAAGGCCT
ACGGGTTCGCGACACTGCGCGGCCTTGTTTCCTGGGCTGGTGAGGAGATC
GGTGGCCGTGGTGCTTATGCGTGTCCTCTCTCTTACGCTACTGGCATCGA
CACTTTCTCTTGCCGCAGGCCATCAG
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Synonyms
Publications