EWM27382.1, cds3288 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM27382.1 vs. NCBI_GenBank
Match: gi|585109609|gb|EWM27382.1| (hypothetical protein Naga_100328g4, partial [Nannochloropsis gaditana]) HSP 1 Score: 449.899 bits (1156), Expect = 2.239e-159 Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0
Query: 1 MRVLSLTLLASTLSLAAGHQTLRGLVSWAGEEIGGRGASKDAFAGLEDPMRQATDTVRAKNGMEPLTSDLSLSRTALYLATELGKKDQKEAEVSPELEKALLERAKAYGFAGTSVKAQVFTYDAKAMGLTAKDSEAHALAAVNYWTSKDATAGLEGEREEEMEDEDKDATAGLEEGEAEEEIEDEDEDEDEDEDEDEDEDEDEDEDEDDEDKDATAGLEEGEAEEEIEDEDEDEDEDEE 239
MRVLSLTLLASTLSLAAGHQTLRGLVSWAGEEIGGRGASKDAFAGLEDPMRQATDTVRAKNGMEPLTSDLSLSRTALYLATELGKKDQKEAEVSPELEKALLERAKAYGFAGTSVKAQVFTYDAKAMGLTAKDSEAHALAAVNYWTSKDATAGLEGEREEEMEDEDKDATAGLEEGEAEEEIEDEDEDEDEDEDEDEDEDEDEDEDEDDEDKDATAGLEEGEAEEEIEDEDEDEDEDEE
Sbjct: 1 MRVLSLTLLASTLSLAAGHQTLRGLVSWAGEEIGGRGASKDAFAGLEDPMRQATDTVRAKNGMEPLTSDLSLSRTALYLATELGKKDQKEAEVSPELEKALLERAKAYGFAGTSVKAQVFTYDAKAMGLTAKDSEAHALAAVNYWTSKDATAGLEGEREEEMEDEDKDATAGLEEGEAEEEIEDEDEDEDEDEDEDEDEDEDEDEDEDDEDKDATAGLEEGEAEEEIEDEDEDEDEDEE 239
BLAST of EWM27382.1 vs. NCBI_GenBank
Match: gi|585109618|gb|EWM27390.1| (hypothetical protein Naga_100185g3 [Nannochloropsis gaditana]) HSP 1 Score: 199.134 bits (505), Expect = 9.908e-60 Identity = 121/223 (54.26%), Postives = 142/223 (63.68%), Query Frame = 0
Query: 1 MRVLSLTLLASTLSLAAGHQTLRGLVSWAGEEIGGRGASKDAFAGLEDPMRQATDTVRAKNGMEPLTSDLSLSRTALYLATELGKKDQKEAEVSPELEKALLERAKAYGFAGTSVKAQVFTYDAKAMGLTAKDSEAHALAAVNYWT-SKDATAGLEGEREEEMEDEDKDATAGLEEGEAEEEIEDEDEDEDEDEDEDEDEDEDEDEDEDDEDKDATAGLEEGE 222
M++ S L T S AA QTLRGL +WAGEEIG AS+DAF LEDPMR A +TVRA++G+EPL SDLSLSRTAL LA ELG +D KEA +SPE+E LLERA+A GF GTSVKA +FT DAKA LTA D+EAHALAAV W K+ATAGL ++ + + ATAGL+ D ED + DE E K A AGLE GE
Sbjct: 1 MKIFSFALAGITCS-AAVAQTLRGLAAWAGEEIGVNTASRDAFTSLEDPMRVAANTVRAEHGLEPLASDLSLSRTALDLARELGTQDNKEAMLSPEVESKLLERARANGFTGTSVKANIFTIDAKAENLTATDTEAHALAAVASWAGGKNATAGL------DVNEHEHAATAGLK------------------VDGHEDVSDHSDEGGVKEVKGAAAGLEVGE 198
BLAST of EWM27382.1 vs. NCBI_GenBank
Match: gi|585109619|gb|EWM27391.1| (hypothetical protein Naga_100185g3 [Nannochloropsis gaditana]) HSP 1 Score: 194.897 bits (494), Expect = 5.428e-58 Identity = 121/224 (54.02%), Postives = 142/224 (63.39%), Query Frame = 0
Query: 1 MRVLSLTLLASTLSLAAGHQTLRGLVSWAGEEIGGRGAS-KDAFAGLEDPMRQATDTVRAKNGMEPLTSDLSLSRTALYLATELGKKDQKEAEVSPELEKALLERAKAYGFAGTSVKAQVFTYDAKAMGLTAKDSEAHALAAVNYWT-SKDATAGLEGEREEEMEDEDKDATAGLEEGEAEEEIEDEDEDEDEDEDEDEDEDEDEDEDEDDEDKDATAGLEEGE 222
M++ S L T S AA QTLRGL +WAGEEIG AS +DAF LEDPMR A +TVRA++G+EPL SDLSLSRTAL LA ELG +D KEA +SPE+E LLERA+A GF GTSVKA +FT DAKA LTA D+EAHALAAV W K+ATAGL ++ + + ATAGL+ D ED + DE E K A AGLE GE
Sbjct: 1 MKIFSFALAGITCS-AAVAQTLRGLAAWAGEEIGVNTASARDAFTSLEDPMRVAANTVRAEHGLEPLASDLSLSRTALDLARELGTQDNKEAMLSPEVESKLLERARANGFTGTSVKANIFTIDAKAENLTATDTEAHALAAVASWAGGKNATAGL------DVNEHEHAATAGLK------------------VDGHEDVSDHSDEGGVKEVKGAAAGLEVGE 199 The following BLAST results are available for this feature:
BLAST of EWM27382.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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