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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100212g6.2169.mrna |
| Orig protein id | gnl|cribi|Naga_100212g6.2169 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:1219911..1222814 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3280 ID=rna3280|Name=rna3280|organism=Nannochloropsis gaditana|type=mRNA|length=741bp
ATGTACATCCTCTTTGGCGTTCCCCTTCTCCTTCTCATGGCGTCACCAGC
CAGCCAGGCGTTGAGGATATCGACGATGACCCCCTTTTTCAGCCGTCAAG
TCTCGGAAAGAGCCGCCGGCTTGAGCAAGATTCACTCGGCACCTAAGTCT
AGCTCTGCTGTGTGTGCGACAGACACAAGCTCCATTACGTCCACCCCAAC
AACCTGGGATGAGCAAGGAGCGGCTGGGTTCATTCCTCCTCCCATAGCGG
TAGTGGGGCTGTTGACGCGAGTAGGACCTGGAGGATTCGGAGGGACGGGC
CCGCCTTTGAAATTCGACGAGGTCATGCAGGCTATCGACGACACATACGA
CTACACGCCTAAGCCCTTCAAAAATGGGGACGTAACGAACCCTGCAGGAA
CTAATGCGGGCTCCTGCAAGCTATTCTCCCTCGGCATCCTTCACGGCTTA
ACCCCCGCCTCGTTGCTCGCCCTTTTCGGTGAACACTACCGGTCTGTAAT
TCAGACCCCAAAAGGTAGCGATCACGGGAATATTCGAAGTCTCCTCTCAA
AGGGATGGCAGGCGGTCTCTTTTCCTGAAGATTTCCCTGAAAAGTTCGCA
TTCAATTGGACAAGACACTTCAAAGAAAATGAAAGGACAGTTTTGATCAA
ATTCAATTTGTTGCCTCCCATGGGAGGAGCAGGCCCAAGCAGCGACCCTG
GCGGTATTCTTGGGCCAGCGAGGGAGCATATTCGCGTGTGA back to topprotein sequence of rna3280 >rna3280-protein ID=rna3280-protein|Name=rna3280|organism=Nannochloropsis gaditana|type=polypeptide|length=558bp
MSAPMLEGRERWIPSGPHPAVFRPNAKQAKDVSALSLLSTVAGLSPPAQP
ELEHCKESATGTSGGCGSRLRERPDSLPLAYATDPSVPDAAHRSVRAPAV
PSLSSRAASASTSATASSSFSSAHAPPPGAASSSPSLSRPAGFPCLRRIK
PDHILPVHPHMLPRRPRDQTSPFPLLDALALTSNSLKHHLVPSHARQETA
RTCEVAEEDVARGATHRGVRYKSNQRCDWKDHERLEGNENRPRKSAKVGR
GDNAGTRAWEEYPPPFRRVSRAVDSTRLEEPAFPVDPSLPLLDSTSASIL
HARNGVSGAIARLAAQGMLDWEKVFNARALIRACSQARGVADMTAGVLPL
LDHLLDTQPQAFAPKRRKAKSGGVGERGPPAGGAQGNSAGGDPSISQLIQ
QLAADENACYVVASVNATGIESVWCNDRMSELFISSEELEGLKSQTRMAI
YSFWPRFLSGPGLYELMGAFSAIMVQSTHTPSLDVILECCVQRAVKGSER
PAPTKCLATVGMIINRLREGNVLILRLLPCGRSDLKSRRRQESRARGRSM
DVVQGSYE back to topmRNA from alignment at CM002460.1:1219911..1222814- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3280 ID=rna3280|Name=rna3280|organism=Nannochloropsis gaditana|type=mRNA|length=2904bp|location=Sequence derived from alignment at CM002460.1:1219911..1222814- (Nannochloropsis gaditana)
CAGTCATTCCGCATTAAAAATACAGCCTAGCATCCTTGCGGTTGTGCGCG
CCTATTTTATCTATCCCTTGGAAGATACAGATTTTTTTATCTTCTTCTGG
TGTGACATTTGGTGCGTATGCTCGATTTTTGACTTACTGCGATCAGCGCA
GAGGAGAGGACTTCGCTCGCGGTAAGGCCGAGCAAGGGAAAACACACGAA
GATAAAGATCAAATCTAACACCGTTGCAACTGTATGAAACACACTGTGTT
GGCAAAGCGTGTATGGTATCTCCTGCGTGCCCGTGTCGCGGTGTGCCCTG
TCGTCAGGCTGGCAACGCAGTGGAGTAGGGGAGGGTGGTGCGTTCCAGTG
CAAGGAGAGGAAAAAGCCGACAGTCTGCCCACGTGTCGTCTGAGGCCTTG
GGGGACAAGTTAACCCCGCTTCGTCGTCCTTCGGTTCTCATGCATAAACA
GCTACCAGTACTTGATAGCTACGAGTTCTAGATAAGAAGCATTGTGGTAC
CCTCAAAAGGAGATATTCACGGAGATTTGTCCCGCCGCGACCACGTCGGA
ACCGCCGAGTATAAGTACGCCGGAGATTGAATGTCCTGCACTATTGACGT
TGTTCATTTGTCTAACCGCACCGCTACGACACACTCTTCCACCCTTCATT
CATCTCTACGCTTGAATTACACTTCTTCTCTCAGGGTCCTCAACTTACAA
ACAAGATGTCTGCGCCAATGCTGGAGGGTAGAGAGCGATGGATTCCTTCC
GGCCCTCATCCTGCTGTCTTCCGCCCTAATGCCAAACAAGCCAAGGACGT
CAGTGCTCTCTCTCTTCTGTCGACAGTTGCTGGCCTGAGTCCACCGGCAC
AGTAAGTTTTGGGTGTGGATGACGTCGACAGGTCATGAGACCGATCGCAT
GTATGTAATCAATGAGAAGTGTAACCTAAATATGCCGTACATTGGCACAG
GCCGGAGCTCGAGCATTGTAAGGAATCGGCCACTGGAACCAGTGGAGGCT
GCGGATCGCGATTACGAGAGAGGCCTGACTCTTTACCGCTCGCTTACGCC
ACGGACCCTTCAGTGCCCGATGCAGCTCATCGGTCTGTCCGAGCACCGGC
AGTTCCGTCCCTCTCGTCTCGGGCTGCCTCGGCGTCGACGTCTGCGACCG
CATCTTCCTCCTTTTCCTCCGCGCACGCACCTCCCCCTGGCGCCGCCTCG
TCGTCCCCGTCTCTCTCGAGGCCCGCGGGCTTCCCTTGCCTCCGTCGTAT
TAAGCCTGACCACATCCTCCCTGTGCACCCACACATGCTGCCGCGACGAC
CGCGTGATCAAACCTCTCCCTTCCCTCTCTTGGACGCGCTCGCACTCACT
TCCAACTCCCTCAAACATCACCTTGTCCCCTCACACGCACGTCAAGAAAC
GGCCCGGACTTGCGAGGTGGCGGAGGAGGACGTGGCGAGGGGGGCCACCC
ACCGTGGTGTCAGGTACAAAAGCAACCAACGGTGTGATTGGAAGGATCAC
GAAAGGTTGGAAGGTAACGAAAACAGGCCGCGCAAGTCTGCCAAAGTAGG
CCGCGGCGACAATGCGGGAACGCGCGCGTGGGAGGAGTACCCTCCCCCCT
TCCGTCGCGTCTCCAGGGCCGTGGATTCCACCCGGCTCGAGGAACCCGCT
TTTCCCGTGGACCCCTCCCTTCCCCTGCTCGACTCCACCTCAGCGAGCAT
CCTCCACGCTCGGAACGGCGTGAGTGGCGCCATCGCCCGTCTGGCCGCCC
AGGGGATGTTGGACTGGGAGAAAGTCTTCAACGCGAGGGCGCTGATTAGG
GCGTGCTCGCAGGCTCGAGGGGTGGCGGATATGACCGCCGGAGTCCTTCC
TCTGCTTGACCACCTGCTTGACACCCAGCCTCAGGCGTTCGCGCCAAAAC
GGAGGAAAGCAAAGAGCGGGGGTGTGGGGGAGAGGGGGCCCCCGGCGGGA
GGGGCACAAGGGAACAGTGCGGGGGGCGACCCCAGCATATCCCAGCTAAT
CCAGCAGCTGGCGGCGGATGAGAACGCCTGCTACGTAGTGGCCTCCGTCA
ACGCGACGGGTATTGAGTCGGTTTGGTGCAACGACCGCATGAGCGAGCTC
TTTATATCCTCGGAAGGTGGGTTCGGCCCCGCCCGTCGGTCTCCTTCCTC
CACCGCCACTGCCCCTGTACCTATCCATTCACCTTCCTCCCGCTCTCTTA
TCCCCTCCCCTCAGAGCTCGAGGGCCTCAAGTCCCAGACGCGCATGGCAA
TCTACAGCTTCTGGCCTCGCTTCCTCTCGGGCCCGGGCCTGTACGAGCTG
ATGGGCGCCTTCTCGGCCATCATGGTCCAGTCGACGCACACCCCCTCCCT
GGACGTGATCCTGGAGTGCTGCGTCCAGCGGGCGGTGAAGGGCAGCGAGA
GGCCCGCCCCCACCAAGTGCCTGGCGACCGTGGGCATGATCATCAATCGG
TTGAGGGAGGGGAATGTGTTGATCCTCCGCCTCTTGCCCTGCGGCCGAAG
CGACCTCAAGAGCCGCAGGCGCCAGGAAAGTAGAGCAAGAGGGAGGAGCA
TGGATGTCGTCCAAGGGTCTTACGAGTAGTGGGCAAAGCTTGCGGTCAGA
GCTTTCGGGTTGAGAGAAGGATAGAGTAGAGCAGTGGTCACATGCTACTA
GGTAGTTGGCACAGTAAAAATAAACAAATAAGCTCAAAAGAGGAGCCAAG
ATAAAAGATGGACAACAGGTTGTAGAACTAGAAACGAGGATGGAGGACTC
GCGGAGATGTGAATTGGCTTATGTGAATGAATAGCAAAGCCCTGGGGAGT
CCCGGCACAATGTGTATGTCCTCATCGAACCCGTGGAACCGCCTTGGAGG
CCGCTCAATCCTTGCTGTTCCTTTTCAAAGTCTTGGATAGTCAGCTGTAC
ATGC back to topCoding sequence (CDS) from alignment at CM002460.1:1219911..1222814- >rna3280 ID=rna3280|Name=rna3280|organism=Nannochloropsis gaditana|type=CDS|length=5031bp|location=Sequence derived from alignment at CM002460.1:1219911..1222814- (Nannochloropsis gaditana)
AGCTCGAGGGCCTCAAGTCCCAGACGCGCATGGCAATCTACAGCTTCTGG
CCTCGCTTCCTCTCGGGCCCGGGCCTGTACGAGCTGATGGGCGCCTTCTC
GGCCATCATGGTCCAGTCGACGCACACCCCCTCCCTGGACGTGATCCTGG
AGTGCTGCGTCCAGCGGGCGGTGAAGGGCAGCGAGAGGCCCGCCCCCACC
AAGTGCCTGGCGACCGTGGGCATGATCATCAATCGGTTGAGGGAGGGGAA
TGTGTTGATCCTCCGCCTCTTGCCCTGCGGCCGAAGCGACCTCAAGAGCC
GCAGGCGCCAGGAAAGTAGAGCAAGAGGGAGGAGCATGGATGTCGTCCAA
GGGTCTTACGAGTAGGCCGGAGCTCGAGCATTGTAAGGAATCGGCCACTG
GAACCAGTGGAGGCTGCGGATCGCGATTACGAGAGAGGCCTGACTCTTTA
CCGCTCGCTTACGCCACGGACCCTTCAGTGCCCGATGCAGCTCATCGGTC
TGTCCGAGCACCGGCAGTTCCGTCCCTCTCGTCTCGGGCTGCCTCGGCGT
CGACGTCTGCGACCGCATCTTCCTCCTTTTCCTCCGCGCACGCACCTCCC
CCTGGCGCCGCCTCGTCGTCCCCGTCTCTCTCGAGGCCCGCGGGCTTCCC
TTGCCTCCGTCGTATTAAGCCTGACCACATCCTCCCTGTGCACCCACACA
TGCTGCCGCGACGACCGCGTGATCAAACCTCTCCCTTCCCTCTCTTGGAC
GCGCTCGCACTCACTTCCAACTCCCTCAAACATCACCTTGTCCCCTCACA
CGCACGTCAAGAAACGGCCCGGACTTGCGAGGTGGCGGAGGAGGACGTGG
CGAGGGGGGCCACCCACCGTGGTGTCAGGTACAAAAGCAACCAACGGTGT
GATTGGAAGGATCACGAAAGGTTGGAAGGTAACGAAAACAGGCCGCGCAA
GTCTGCCAAAGTAGGCCGCGGCGACAATGCGGGAACGCGCGCGTGGGAGG
AGTACCCTCCCCCCTTCCGTCGCGTCTCCAGGGCCGTGGATTCCACCCGG
CTCGAGGAACCCGCTTTTCCCGTGGACCCCTCCCTTCCCCTGCTCGACTC
CACCTCAGCGAGCATCCTCCACGCTCGGAACGGCGTGAGTGGCGCCATCG
CCCGTCTGGCCGCCCAGGGGATGTTGGACTGGGAGAAAGTCTTCAACGCG
AGGGCGCTGATTAGGGCGTGCTCGCAGGCTCGAGGGGTGGCGGATATGAC
CGCCGGAGTCCTTCCTCTGCTTGACCACCTGCTTGACACCCAGCCTCAGG
CGTTCGCGCCAAAACGGAGGAAAGCAAAGAGCGGGGGTGTGGGGGAGAGG
GGGCCCCCGGCGGGAGGGGCACAAGGGAACAGTGCGGGGGGCGACCCCAG
CATATCCCAGCTAATCCAGCAGCTGGCGGCGGATGAGAACGCCTGCTACG
TAGTGGCCTCCGTCAACGCGACGGGTATTGAGTCGGTTTGGTGCAACGAC
CGCATGAGCGAGCTCTTTATATCCTCGGAAGATGTCTGCGCCAATGCTGG
AGGGTAGAGAGCGATGGATTCCTTCCGGCCCTCATCCTGCTGTCTTCCGC
CCTAATGCCAAACAAGCCAAGGACGTCAGTGCTCTCTCTCTTCTGTCGAC
AGTTGCTGGCCTGAGTCCACCGGCACAAGCTCGAGGGCCTCAAGTCCCAG
ACGCGCATGGCAATCTACAGCTTCTGGCCTCGCTTCCTCTCGGGCCCGGG
CCTGTACGAGCTGATGGGCGCCTTCTCGGCCATCATGGTCCAGTCGACGC
ACACCCCCTCCCTGGACGTGATCCTGGAGTGCTGCGTCCAGCGGGCGGTG
AAGGGCAGCGAGAGGCCCGCCCCCACCAAGTGCCTGGCGACCGTGGGCAT
GATCATCAATCGGTTGAGGGAGGGGAATGTGTTGATCCTCCGCCTCTTGC
CCTGCGGCCGAAGCGACCTCAAGAGCCGCAGGCGCCAGGAAAGTAGAGCA
AGAGGGAGGAGCATGGATGTCGTCCAAGGGTCTTACGAGTAGGCCGGAGC
TCGAGCATTGTAAGGAATCGGCCACTGGAACCAGTGGAGGCTGCGGATCG
CGATTACGAGAGAGGCCTGACTCTTTACCGCTCGCTTACGCCACGGACCC
TTCAGTGCCCGATGCAGCTCATCGGTCTGTCCGAGCACCGGCAGTTCCGT
CCCTCTCGTCTCGGGCTGCCTCGGCGTCGACGTCTGCGACCGCATCTTCC
TCCTTTTCCTCCGCGCACGCACCTCCCCCTGGCGCCGCCTCGTCGTCCCC
GTCTCTCTCGAGGCCCGCGGGCTTCCCTTGCCTCCGTCGTATTAAGCCTG
ACCACATCCTCCCTGTGCACCCACACATGCTGCCGCGACGACCGCGTGAT
CAAACCTCTCCCTTCCCTCTCTTGGACGCGCTCGCACTCACTTCCAACTC
CCTCAAACATCACCTTGTCCCCTCACACGCACGTCAAGAAACGGCCCGGA
CTTGCGAGGTGGCGGAGGAGGACGTGGCGAGGGGGGCCACCCACCGTGGT
GTCAGGTACAAAAGCAACCAACGGTGTGATTGGAAGGATCACGAAAGGTT
GGAAGGTAACGAAAACAGGCCGCGCAAGTCTGCCAAAGTAGGCCGCGGCG
ACAATGCGGGAACGCGCGCGTGGGAGGAGTACCCTCCCCCCTTCCGTCGC
GTCTCCAGGGCCGTGGATTCCACCCGGCTCGAGGAACCCGCTTTTCCCGT
GGACCCCTCCCTTCCCCTGCTCGACTCCACCTCAGCGAGCATCCTCCACG
CTCGGAACGGCGTGAGTGGCGCCATCGCCCGTCTGGCCGCCCAGGGGATG
TTGGACTGGGAGAAAGTCTTCAACGCGAGGGCGCTGATTAGGGCGTGCTC
GCAGGCTCGAGGGGTGGCGGATATGACCGCCGGAGTCCTTCCTCTGCTTG
ACCACCTGCTTGACACCCAGCCTCAGGCGTTCGCGCCAAAACGGAGGAAA
GCAAAGAGCGGGGGTGTGGGGGAGAGGGGGCCCCCGGCGGGAGGGGCACA
AGGGAACAGTGCGGGGGGCGACCCCAGCATATCCCAGCTAATCCAGCAGC
TGGCGGCGGATGAGAACGCCTGCTACGTAGTGGCCTCCGTCAACGCGACG
GGTATTGAGTCGGTTTGGTGCAACGACCGCATGAGCGAGCTCTTTATATC
CTCGGAAGATGTCTGCGCCAATGCTGGAGGGTAGAGAGCGATGGATTCCT
TCCGGCCCTCATCCTGCTGTCTTCCGCCCTAATGCCAAACAAGCCAAGGA
CGTCAGTGCTCTCTCTCTTCTGTCGACAGTTGCTGGCCTGAGTCCACCGG
CACAAGCTCGAGGGCCTCAAGTCCCAGACGCGCATGGCAATCTACAGCTT
CTGGCCTCGCTTCCTCTCGGGCCCGGGCCTGTACGAGCTGATGGGCGCCT
TCTCGGCCATCATGGTCCAGTCGACGCACACCCCCTCCCTGGACGTGATC
CTGGAGTGCTGCGTCCAGCGGGCGGTGAAGGGCAGCGAGAGGCCCGCCCC
CACCAAGTGCCTGGCGACCGTGGGCATGATCATCAATCGGTTGAGGGAGG
GGAATGTGTTGATCCTCCGCCTCTTGCCCTGCGGCCGAAGCGACCTCAAG
AGCCGCAGGCGCCAGGAAAGTAGAGCAAGAGGGAGGAGCATGGATGTCGT
CCAAGGGTCTTACGAGTAGGCCGGAGCTCGAGCATTGTAAGGAATCGGCC
ACTGGAACCAGTGGAGGCTGCGGATCGCGATTACGAGAGAGGCCTGACTC
TTTACCGCTCGCTTACGCCACGGACCCTTCAGTGCCCGATGCAGCTCATC
GGTCTGTCCGAGCACCGGCAGTTCCGTCCCTCTCGTCTCGGGCTGCCTCG
GCGTCGACGTCTGCGACCGCATCTTCCTCCTTTTCCTCCGCGCACGCACC
TCCCCCTGGCGCCGCCTCGTCGTCCCCGTCTCTCTCGAGGCCCGCGGGCT
TCCCTTGCCTCCGTCGTATTAAGCCTGACCACATCCTCCCTGTGCACCCA
CACATGCTGCCGCGACGACCGCGTGATCAAACCTCTCCCTTCCCTCTCTT
GGACGCGCTCGCACTCACTTCCAACTCCCTCAAACATCACCTTGTCCCCT
CACACGCACGTCAAGAAACGGCCCGGACTTGCGAGGTGGCGGAGGAGGAC
GTGGCGAGGGGGGCCACCCACCGTGGTGTCAGGTACAAAAGCAACCAACG
GTGTGATTGGAAGGATCACGAAAGGTTGGAAGGTAACGAAAACAGGCCGC
GCAAGTCTGCCAAAGTAGGCCGCGGCGACAATGCGGGAACGCGCGCGTGG
GAGGAGTACCCTCCCCCCTTCCGTCGCGTCTCCAGGGCCGTGGATTCCAC
CCGGCTCGAGGAACCCGCTTTTCCCGTGGACCCCTCCCTTCCCCTGCTCG
ACTCCACCTCAGCGAGCATCCTCCACGCTCGGAACGGCGTGAGTGGCGCC
ATCGCCCGTCTGGCCGCCCAGGGGATGTTGGACTGGGAGAAAGTCTTCAA
CGCGAGGGCGCTGATTAGGGCGTGCTCGCAGGCTCGAGGGGTGGCGGATA
TGACCGCCGGAGTCCTTCCTCTGCTTGACCACCTGCTTGACACCCAGCCT
CAGGCGTTCGCGCCAAAACGGAGGAAAGCAAAGAGCGGGGGTGTGGGGGA
GAGGGGGCCCCCGGCGGGAGGGGCACAAGGGAACAGTGCGGGGGGCGACC
CCAGCATATCCCAGCTAATCCAGCAGCTGGCGGCGGATGAGAACGCCTGC
TACGTAGTGGCCTCCGTCAACGCGACGGGTATTGAGTCGGTTTGGTGCAA
CGACCGCATGAGCGAGCTCTTTATATCCTCGGAAGATGTCTGCGCCAATG
CTGGAGGGTAGAGAGCGATGGATTCCTTCCGGCCCTCATCCTGCTGTCTT
CCGCCCTAATGCCAAACAAGCCAAGGACGTCAGTGCTCTCTCTCTTCTGT
CGACAGTTGCTGGCCTGAGTCCACCGGCACA back to top
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