EWM27402.1, cds3271 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM27402.1 vs. NCBI_GenBank
Match: gi|585109633|gb|EWM27402.1| (hypothetical protein Naga_100212g6 [Nannochloropsis gaditana]) HSP 1 Score: 1131.7 bits (2926), Expect = 0.000e+0 Identity = 558/558 (100.00%), Postives = 558/558 (100.00%), Query Frame = 0
Query: 1 MSAPMLEGRERWIPSGPHPAVFRPNAKQAKDVSALSLLSTVAGLSPPAQPELEHCKESATGTSGGCGSRLRERPDSLPLAYATDPSVPDAAHRSVRAPAVPSLSSRAASASTSATASSSFSSAHAPPPGAASSSPSLSRPAGFPCLRRIKPDHILPVHPHMLPRRPRDQTSPFPLLDALALTSNSLKHHLVPSHARQETARTCEVAEEDVARGATHRGVRYKSNQRCDWKDHERLEGNENRPRKSAKVGRGDNAGTRAWEEYPPPFRRVSRAVDSTRLEEPAFPVDPSLPLLDSTSASILHARNGVSGAIARLAAQGMLDWEKVFNARALIRACSQARGVADMTAGVLPLLDHLLDTQPQAFAPKRRKAKSGGVGERGPPAGGAQGNSAGGDPSISQLIQQLAADENACYVVASVNATGIESVWCNDRMSELFISSEELEGLKSQTRMAIYSFWPRFLSGPGLYELMGAFSAIMVQSTHTPSLDVILECCVQRAVKGSERPAPTKCLATVGMIINRLREGNVLILRLLPCGRSDLKSRRRQESRARGRSMDVVQGSYE 558
MSAPMLEGRERWIPSGPHPAVFRPNAKQAKDVSALSLLSTVAGLSPPAQPELEHCKESATGTSGGCGSRLRERPDSLPLAYATDPSVPDAAHRSVRAPAVPSLSSRAASASTSATASSSFSSAHAPPPGAASSSPSLSRPAGFPCLRRIKPDHILPVHPHMLPRRPRDQTSPFPLLDALALTSNSLKHHLVPSHARQETARTCEVAEEDVARGATHRGVRYKSNQRCDWKDHERLEGNENRPRKSAKVGRGDNAGTRAWEEYPPPFRRVSRAVDSTRLEEPAFPVDPSLPLLDSTSASILHARNGVSGAIARLAAQGMLDWEKVFNARALIRACSQARGVADMTAGVLPLLDHLLDTQPQAFAPKRRKAKSGGVGERGPPAGGAQGNSAGGDPSISQLIQQLAADENACYVVASVNATGIESVWCNDRMSELFISSEELEGLKSQTRMAIYSFWPRFLSGPGLYELMGAFSAIMVQSTHTPSLDVILECCVQRAVKGSERPAPTKCLATVGMIINRLREGNVLILRLLPCGRSDLKSRRRQESRARGRSMDVVQGSYE
Sbjct: 1 MSAPMLEGRERWIPSGPHPAVFRPNAKQAKDVSALSLLSTVAGLSPPAQPELEHCKESATGTSGGCGSRLRERPDSLPLAYATDPSVPDAAHRSVRAPAVPSLSSRAASASTSATASSSFSSAHAPPPGAASSSPSLSRPAGFPCLRRIKPDHILPVHPHMLPRRPRDQTSPFPLLDALALTSNSLKHHLVPSHARQETARTCEVAEEDVARGATHRGVRYKSNQRCDWKDHERLEGNENRPRKSAKVGRGDNAGTRAWEEYPPPFRRVSRAVDSTRLEEPAFPVDPSLPLLDSTSASILHARNGVSGAIARLAAQGMLDWEKVFNARALIRACSQARGVADMTAGVLPLLDHLLDTQPQAFAPKRRKAKSGGVGERGPPAGGAQGNSAGGDPSISQLIQQLAADENACYVVASVNATGIESVWCNDRMSELFISSEELEGLKSQTRMAIYSFWPRFLSGPGLYELMGAFSAIMVQSTHTPSLDVILECCVQRAVKGSERPAPTKCLATVGMIINRLREGNVLILRLLPCGRSDLKSRRRQESRARGRSMDVVQGSYE 558
BLAST of EWM27402.1 vs. NCBI_GenBank
Match: gi|553186625|ref|XP_005854455.1| (hypothetical protein NGA_0244301 [Nannochloropsis gaditana CCMP526] >gi|553187875|ref|XP_005854696.1| hypothetical protein NGA_0244302 [Nannochloropsis gaditana CCMP526] >gi|422294361|gb|EKU21661.1| hypothetical protein NGA_0244302 [Nannochloropsis gaditana CCMP526] >gi|422294601|gb|EKU21901.1| hypothetical protein NGA_0244301 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 1103.58 bits (2853), Expect = 0.000e+0 Identity = 547/558 (98.03%), Postives = 550/558 (98.57%), Query Frame = 0
Query: 1 MSAPMLEGRERWIPSGPHPAVFRPNAKQAKDVSALSLLSTVAGLSPPAQPELEHCKESATGTSGGCGSRLRERPDSLPLAYATDPSVPDAAHRSVRAPAVPSLSSRAASASTSATASSSFSSAHAPPPGAASSSPSLSRPAGFPCLRRIKPDHILPVHPHMLPRRPRDQTSPFPLLDALALTSNSLKHHLVPSHARQETARTCEVAEEDVARGATHRGVRYKSNQRCDWKDHERLEGNENRPRKSAKVGRGDNAGTRAWEEYPPPFRRVSRAVDSTRLEEPAFPVDPSLPLLDSTSASILHARNGVSGAIARLAAQGMLDWEKVFNARALIRACSQARGVADMTAGVLPLLDHLLDTQPQAFAPKRRKAKSGGVGERGPPAGGAQGNSAGGDPSISQLIQQLAADENACYVVASVNATGIESVWCNDRMSELFISSEELEGLKSQTRMAIYSFWPRFLSGPGLYELMGAFSAIMVQSTHTPSLDVILECCVQRAVKGSERPAPTKCLATVGMIINRLREGNVLILRLLPCGRSDLKSRRRQESRARGRSMDVVQGSYE 558
MSAPMLEGRERWIPSGPHPAVFRPNA QAKDVSALSLLSTVAGLSPPAQPELEHCKESATGTSGGC SRLRERPDSLPLAYATDPSVP+AAHRSVRAPAVPSLSSRAASASTSATAS SFSSAHAPPPGAASSSPSLSRPAGFPCLRRIKPDHILPVHPHMLPRRPRDQTS FPLLDA ALTSNSLKHHLVPSHARQETART EVAEEDVARGATHRGVRYKSNQRCDW+DHERLEGNENRPRKSAKVGRGDNAGTRAWEEY PFRRVSRAVDSTRLEEPAFPVDPSLPLLDSTSASILHARNGVSGAIARLAAQGMLDWEKVFNARALIRACSQARGVADMTAGVLPLLDHLLDTQPQAFAPKRRKAKSGGVGERGPPAGGAQGNSAGGDPSISQLIQQLAADENACYVVASVNATGIESVWCNDRMSELFISSEELEGLKSQTRMAIYSFWPRFLSGPGLYELMGAFSAIMVQSTHTPSLDVILECCVQRAVKGSERPAPTKCLATVGMIINRLREGNVLILRLLPCGRSDLKSRRRQESRARGRS+DVVQGSYE
Sbjct: 1 MSAPMLEGRERWIPSGPHPAVFRPNATQAKDVSALSLLSTVAGLSPPAQPELEHCKESATGTSGGCRSRLRERPDSLPLAYATDPSVPEAAHRSVRAPAVPSLSSRAASASTSATASFSFSSAHAPPPGAASSSPSLSRPAGFPCLRRIKPDHILPVHPHMLPRRPRDQTSSFPLLDARALTSNSLKHHLVPSHARQETARTWEVAEEDVARGATHRGVRYKSNQRCDWEDHERLEGNENRPRKSAKVGRGDNAGTRAWEEYSSPFRRVSRAVDSTRLEEPAFPVDPSLPLLDSTSASILHARNGVSGAIARLAAQGMLDWEKVFNARALIRACSQARGVADMTAGVLPLLDHLLDTQPQAFAPKRRKAKSGGVGERGPPAGGAQGNSAGGDPSISQLIQQLAADENACYVVASVNATGIESVWCNDRMSELFISSEELEGLKSQTRMAIYSFWPRFLSGPGLYELMGAFSAIMVQSTHTPSLDVILECCVQRAVKGSERPAPTKCLATVGMIINRLREGNVLILRLLPCGRSDLKSRRRQESRARGRSVDVVQGSYE 558
BLAST of EWM27402.1 vs. NCBI_GenBank
Match: gi|585103505|gb|EWM22860.1| (hypothetical protein Naga_100988g2 [Nannochloropsis gaditana]) HSP 1 Score: 73.9442 bits (180), Expect = 2.867e-10 Identity = 79/273 (28.94%), Postives = 112/273 (41.03%), Query Frame = 0
Query: 289 LPLLDSTSASILHARNGVSGAIARLAAQGMLDWEKVFNARALIRACSQARGVADMTAGVLPLLDHLLDTQPQ--------------AFAPKRRKAKSGGVGER---GPPAGGAQGNSAGGDPSISQLIQQLAADENACYVVASVNATGIESVWCNDRMSELFISSEELEGLKSQTRMAIYSFWPRFLSGPGLYELMGAFSAIMVQSTHT---PSLDVILECCVQRAVKGSERPAPTKCLATVGMIINRLREGNVLILRLLPCGRSDLKSRRRQ 541
LP+ ST + ++ G + RL A+ D +K + A + S G+ D G+ L +L + P + + V R GPP A S D + L +LA D AC +V N + V CN RMS LF+S+EE+ GL QT A +FW FL P E + A SA +V S D I+ + KG + +AT+G + LILRL+P G DL RR+
Sbjct: 249 LPVQPSTVNTSIYPLRGFCDGMLRLRAENRFDLKKAIDFSARVEVLSYPYGI-DAAYGINQALRSILVSNPDMSSLSPSLVSSIKASVTAASSSSLLSAVHVRVPHGPPTAQAL-MSTQSDTACLPLFLRLARDTTACLMVFRGN-DHVSDVTCNARMSSLFMSTEEIRGLIGQTGFACCAFWSHFLD-PVDVEALLAGSADLVLDKFNQGRSSFDRIVGVTTRDGRKG-------RAMATLGWHSSE-DVVQTLILRLIPLGFHDLPGSRRR 509
BLAST of EWM27402.1 vs. NCBI_GenBank
Match: gi|553178413|ref|XP_005852550.1| (hypothetical protein NGA_0687300 [Nannochloropsis gaditana CCMP526] >gi|422295983|gb|EKU23282.1| hypothetical protein NGA_0687300 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 69.707 bits (169), Expect = 8.866e-9 Identity = 76/264 (28.79%), Postives = 107/264 (40.53%), Query Frame = 0
Query: 305 GVSGAIARLAAQGMLDWEKVFNARALIRACSQARGVADMTAGVLPLLDHLLDTQPQ--------------AFAPKRRKAKSGGVGER---GPPAGGAQGNSAGGDPSISQLIQQLAADENACYVVASVNATGIESVWCNDRMSELFISSEELEGLKSQTRMAIYSFWPRFLSGPGLYELMGAFSAIMVQSTHT---PSLDVILECCVQRAVKGSERPAPTKCLATVGMIINRLREGNVLILRLLPCGRSDLKSRRRQESRARGR 548
G + RL A+ D +K + A + S G+ D G+ L +L + P + + V R GPP A S D + L +LA D AC +V N + V CN RMS LF+S+EE+ GL QT A +FW FL P E + A SA +V S+D I+ + G + +AT+G + LILRL+P G D+ R+E R GR
Sbjct: 287 GFCDGMLRLRAENRFDLKKAIDFSARVEVLSYPYGI-DAAYGINQALRSILVSNPDMSSLSPSLVSSIKASVTAASSSSLLSAVHVRVPHGPPTAQAL-MSTQSDTACLPLFLRLARDTTACLMVFRGN-DHVSDVTCNARMSSLFMSTEEIRGLIGQTGFACCAFWSHFLD-PVDVEALLAGSADLVLDKFNQGRSSIDRIVGVTTRDGRWG-------RAMATLGWHSSE-DVVQTLILRLIPLGFHDVPVGVREEGREGGR 538
BLAST of EWM27402.1 vs. NCBI_GenBank
Match: gi|585107593|gb|EWM25731.1| (hypothetical protein Naga_100087g15 [Nannochloropsis gaditana]) HSP 1 Score: 64.6994 bits (156), Expect = 2.612e-7 Identity = 57/196 (29.08%), Postives = 92/196 (46.94%), Query Frame = 0
Query: 310 IARLAAQGMLDWEKVFNARALIRACSQARGVADMTAGVLPLLDHLLDTQPQA-------------FAPKRRKAKSGGVGERGPPAGGAQGNSAGGDPSISQLIQQLAADENACYVVASVNATGIESVWCNDRMSELFISSEELEGLKSQTRMAIYSFWPRFLSGPGLYELMGAFSAIMVQSTHTPSLDVILECCVQ 492
I ++A+ G+LD K+ + ++ +QA G D + G+L L+ HLL + GG G R P G+SA P + D+ ACY++ S TG ESV+C++ M +LFIS++EL +T + S W F + GL L A +A+++Q T ++V +EC +
Sbjct: 52 IQKMASMGLLDRRKMVDYVRIVSLFNQATG-KDTSHGLLDLVYHLLTCMSAGEDGGSSLSQIELLHTIGGGIGEIGGKGVRAVP-----GSSAATPPEL---------DDLACYII-SRGGTGAESVFCSEAMKQLFISTDELTCTLKETGLTSVSVWASFTTPEGLATLHRAAAAVLLQR-DTSQVEVQVECVTR 230
BLAST of EWM27402.1 vs. NCBI_GenBank
Match: gi|585100580|gb|EWM20727.1| (hypothetical protein Naga_102498g1 [Nannochloropsis gaditana]) HSP 1 Score: 60.4622 bits (145), Expect = 3.159e-7 Identity = 31/91 (34.07%), Postives = 47/91 (51.65%), Query Frame = 0
Query: 398 LIQQLAADENACYVVASVNATGIESVWCNDRMSELFISSEELEGLKSQTRMAIYSFWPRFLSGPGLYELMGAFSAIMVQSTHTPSLDVILE 488
L +L DE ACY+V+ V CN RM+ LF+ + E++GL QT + +FW RF+ L L A +M+ +DV+L+
Sbjct: 27 LAARLTKDETACYLVSRGGFGHHHVVECNQRMATLFLPNPEIQGLVHQTGLGSSAFWGRFVCNESLLSLYAALVTLMLGYGSKTQIDVVLK 117 The following BLAST results are available for this feature:
BLAST of EWM27402.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 6
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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