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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100138g1.7681.mrna |
| Orig protein id | gnl|cribi|Naga_100138g1.7681 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:1144846..1146973 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3260 ID=rna3260|Name=rna3260|organism=Nannochloropsis gaditana|type=mRNA|length=951bp
TTTCCTGGACGGGATTTGCCATCTCCAACGCTGAATGGACCGGAGTGAAG
CTCCGAGACGTCCTCCTCTGGGCAGGCGTGCCCGAGGAGTATGAGCGGCT
GGGCCTGGCCCACGTCCACTTCATTGGGCTCGACAAGGACATCTCGAACC
AGACCTACGAGGCCTCCATCCCCATCAACAAAGCCGTCGACCCGCGTGGA
GACGTCCTGCTCGCCTTCGCCATGAACGGAGAGCCCATCCCTCGTGATCA
TGGATACCCCGTTCGCGCCGTCGTCCCCGGCATTGTGGGGGCTCGAAACG
TGAAATGGGTCGGGAAGGTGGTGGCCAGCAAGAGTGAGTCTCAAGGATTT
TGGCAGCAGCGCGACTACAAGAACTTCAGTCCCTCAACGGACTGGGATAA
TGTAGACTTCGACTCGGCGCCCGCCATCCAGGACATGCCTATCCAAAGCG
CCATCGCTACTGTGGAGGGCGGCTTGGAGGGAGAAGAGGAGGGCGGCCCC
CTGACTATCAAGGGCTACGCTTACAGTGGAGGAGGGCGGGGGGTCGCGCG
CGTGGACGTGTCGATCGACGGAGGGAAGACTTGGGAGCCTGCCACCATCA
AAGAAGGAGGATGGAAGCATGGTGACTACTCGCGTTCCTGGACATGGGCA
CTCTGGGAGCATTTCGTGCCCGAAGAGAAACTTGAAGGCCTCACCGAAGC
GGACATTTGCGTCAAGGCGACTGACACCTCGTACAACGTGCAACCCGAGA
GCATCGAAGCGTACTGGAATCTGCGGGGTGTGCTGGCTAACTGCTGGGCG
CGACAGAAAGTGGCCCTTCGGAAGGTAGCTGCCTAGAGAATAGAGGGGGG
AAAGAAGTGGTATTATATGATCGGAAAGGGTGAAAGTAGGTTAGACAAAA
AAACTTGACAGATGCTAAGCAATACGTGTTCTGAGTTTTTCATTCGCAAC
A back to topprotein sequence of rna3260 >rna3260-protein ID=rna3260-protein|Name=rna3260|organism=Nannochloropsis gaditana|type=polypeptide|length=612bp
MHSISCFKCAGTGRVQIKRKVKRSHCAQDSPNDTPQSLTPLPKLQLAADE
ALVTKGNRTAQITRTCHVCQGRGEIVSTKKRRGMDKTGVVTIPRRPPDFK
LRGPLRPSSMTSPQPQAGEALCCLSGDWRIFQPVGGHRYSTDDVVTAWIA
GEEMRRGWGRELLRGVESDKADGKCAGLLLIRGGGEKQADGRREEVVRGA
QEQGEGLRGLDLGCGLGSVLMMVCWQLPRLHAVGIEAQASSVERARRSLL
VNGCADRACVRHGDFRNFFPLSSSGSAAAKIRTSLPAPPPPLSPLVSSSS
SLSSPEPRAFEARTFHLITGTPPYFDGHGAPAPFHPADPPISVTSLSSCT
SSTSSLALQSSPSTTSTVLKTKSGKARLRPSLLPAAEDQRPCNFELRGGV
EAYIQTAVVALSGRGIFVMCASDLPGVEARVLRAAAAEDLTVLRKVEVEP
KEGQPNLFAVYTMCHANVSPMAIEKKRRGQDGKDGSVERGESMTHRLKGR
ELDEENGNGATLSTGHECGFDMVASEPGMEGQRVKILGGVETGSVGLEGD
ARKHVSRQREHATRSSIKIRERLPVRKAMPSTLQSNPKASINRRTYAYRR
VLHDMCMPDNEI back to topmRNA from alignment at CM002460.1:1144846..1146973- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna3260 ID=rna3260|Name=rna3260|organism=Nannochloropsis gaditana|type=mRNA|length=2128bp|location=Sequence derived from alignment at CM002460.1:1144846..1146973- (Nannochloropsis gaditana)
CTCACTGGTTCATTTGTTGCCACAGATTAGCTTGATTTTGCGGTGTCAGT
TGAGGAGCCATGTCTGAACCTCCTGGCGCTCGGTCTTAGCCTGAGGATGC
CCAGACTGAACGAGTACTGCCTTGGATCGAAATCTCAAGCCGACTATCCT
ATAAACAATGCATTCCATATCATGTTTCAAATGTGCGGGGACGGGTCGCG
TGCAAATTAAGCGAAAGGTCAAACGATCTCATTGTGCTCAGGACAGTCCC
AACGACACTCCTCAGTCGTTGACGCCCCTACCAAAGTTACAACTGGCTGC
GGACGAAGCCCTGGTAACTAAAGGCAACCGCACAGCCCAAATCACTCGAA
CGTGTCATGTTTGTCAGGGTCGAGGAGAAATCGTCTCGACTAAAAAGCGG
CGGGGGATGGATAAGACCGGTGTCGTCACGATCCCTCGCCGTCCACCTGA
CTTCAAATTACGCGGCCCCTTACGTCCTTCGTCTATGACAAGCCCGCAGC
CTCAAGCAGGGGAAGCTCTATGCTGTCTCTCAGGAGATTGGCGGATCTTT
CAGCCCGTGGGAGGTCATCGGTACTCCACGGACGATGTAGTTACCGCCTG
GATCGCGGGTGAAGAGATGAGACGAGGCTGGGGACGTGAACTGTTGCGAG
GCGTCGAGTCAGACAAGGCTGATGGAAAATGCGCGGGCCTTTTGCTAATC
CGTGGTGGAGGAGAGAAGCAAGCAGATGGTAGAAGAGAGGAAGTCGTTCG
GGGGGCCCAGGAGCAGGGCGAGGGCCTTCGGGGATTGGACTTGGGCTGTG
GGTTGGGCAGCGTCCTGATGATGGTGTGCTGGCAGCTTCCTCGTCTTCAC
GCTGTCGGGATTGAAGCACAAGCCAGCTCGGTGGAGCGTGCGCGCCGCTC
ATTACTGGTCAACGGCTGTGCCGATCGCGCGTGTGTCCGCCATGGAGATT
TTCGAAATTTCTTCCCTTTGTCGTCGTCAGGCAGCGCTGCTGCCAAAATC
CGAACATCCCTCCCTGCGCCCCCTCCACCTCTTTCTCCTCTTGTATCCTC
GTCCTCGTCTCTCTCTTCTCCTGAACCGAGGGCTTTCGAGGCCCGCACTT
TTCATCTCATCACAGGCACCCCACCCTACTTCGACGGCCATGGTGCCCCT
GCTCCCTTCCACCCCGCAGATCCACCTATTTCTGTCACCTCGCTTTCTTC
CTGTACCTCCTCCACATCCTCCCTGGCCCTCCAGTCTTCTCCTTCCACGA
CCTCAACCGTCCTCAAAACTAAGAGTGGAAAAGCCCGCCTCCGTCCCTCT
TTGTTGCCTGCCGCGGAAGACCAACGACCATGCAACTTCGAACTGCGAGG
CGGTGTCGAAGCGTACATCCAGACGGCCGTGGTCGCTTTGAGCGGCAGAG
GGATATTTGTCATGTGTGCCTCGGATCTACCGGGCGTCGAGGCCCGTGTC
TTGCGAGCAGCAGCGGCGGAAGATCTTACAGTTTTGAGGAAAGTTGAGGT
GGAACCGAAGGAGGGGCAGCCGAACCTGTTTGCCGTCTATACGATGTGCC
ATGCGAATGTATCGCCCATGGCGATAGAAAAGAAGAGGAGAGGTCAAGAT
GGGAAGGACGGAAGTGTTGAGAGGGGGGAAAGCATGACGCATAGACTCAA
GGGAAGAGAACTGGATGAGGAAAATGGAAATGGAGCCACGCTAAGCACGG
GACACGAATGTGGATTTGATATGGTCGCGTCAGAACCAGGTATGGAGGGG
CAGAGAGTGAAAATTTTAGGAGGTGTAGAGACTGGCAGTGTGGGTTTGGA
GGGAGATGCACGAAAGCATGTATCACGGCAAAGAGAGCATGCGACGCGCT
CATCTATTAAAATACGAGAGCGTTTGCCAGTTCGGAAAGCGATGCCTTCG
ACTTTACAATCAAACCCCAAAGCATCTATCAATCGAAGGACATATGCCTA
TCGGCGGGTCCTTCATGACATGTGCATGCCTGACAACGAAATATGATTTT
GTGACCCTCTCGTGCGTGAAATAATAATTTTTAATTTGGTGGATTAGACT
CAATCTATATTCTGTTGATGCTAATCTACATTATATATATCGTGCGTGGA
TCTTGGAAATAATGCATCAGGGTTATCA back to topCoding sequence (CDS) from alignment at CM002460.1:1144846..1146973- >rna3260 ID=rna3260|Name=rna3260|organism=Nannochloropsis gaditana|type=CDS|length=1839bp|location=Sequence derived from alignment at CM002460.1:1144846..1146973- (Nannochloropsis gaditana)
ATGCATTCCATATCATGTTTCAAATGTGCGGGGACGGGTCGCGTGCAAAT
TAAGCGAAAGGTCAAACGATCTCATTGTGCTCAGGACAGTCCCAACGACA
CTCCTCAGTCGTTGACGCCCCTACCAAAGTTACAACTGGCTGCGGACGAA
GCCCTGGTAACTAAAGGCAACCGCACAGCCCAAATCACTCGAACGTGTCA
TGTTTGTCAGGGTCGAGGAGAAATCGTCTCGACTAAAAAGCGGCGGGGGA
TGGATAAGACCGGTGTCGTCACGATCCCTCGCCGTCCACCTGACTTCAAA
TTACGCGGCCCCTTACGTCCTTCGTCTATGACAAGCCCGCAGCCTCAAGC
AGGGGAAGCTCTATGCTGTCTCTCAGGAGATTGGCGGATCTTTCAGCCCG
TGGGAGGTCATCGGTACTCCACGGACGATGTAGTTACCGCCTGGATCGCG
GGTGAAGAGATGAGACGAGGCTGGGGACGTGAACTGTTGCGAGGCGTCGA
GTCAGACAAGGCTGATGGAAAATGCGCGGGCCTTTTGCTAATCCGTGGTG
GAGGAGAGAAGCAAGCAGATGGTAGAAGAGAGGAAGTCGTTCGGGGGGCC
CAGGAGCAGGGCGAGGGCCTTCGGGGATTGGACTTGGGCTGTGGGTTGGG
CAGCGTCCTGATGATGGTGTGCTGGCAGCTTCCTCGTCTTCACGCTGTCG
GGATTGAAGCACAAGCCAGCTCGGTGGAGCGTGCGCGCCGCTCATTACTG
GTCAACGGCTGTGCCGATCGCGCGTGTGTCCGCCATGGAGATTTTCGAAA
TTTCTTCCCTTTGTCGTCGTCAGGCAGCGCTGCTGCCAAAATCCGAACAT
CCCTCCCTGCGCCCCCTCCACCTCTTTCTCCTCTTGTATCCTCGTCCTCG
TCTCTCTCTTCTCCTGAACCGAGGGCTTTCGAGGCCCGCACTTTTCATCT
CATCACAGGCACCCCACCCTACTTCGACGGCCATGGTGCCCCTGCTCCCT
TCCACCCCGCAGATCCACCTATTTCTGTCACCTCGCTTTCTTCCTGTACC
TCCTCCACATCCTCCCTGGCCCTCCAGTCTTCTCCTTCCACGACCTCAAC
CGTCCTCAAAACTAAGAGTGGAAAAGCCCGCCTCCGTCCCTCTTTGTTGC
CTGCCGCGGAAGACCAACGACCATGCAACTTCGAACTGCGAGGCGGTGTC
GAAGCGTACATCCAGACGGCCGTGGTCGCTTTGAGCGGCAGAGGGATATT
TGTCATGTGTGCCTCGGATCTACCGGGCGTCGAGGCCCGTGTCTTGCGAG
CAGCAGCGGCGGAAGATCTTACAGTTTTGAGGAAAGTTGAGGTGGAACCG
AAGGAGGGGCAGCCGAACCTGTTTGCCGTCTATACGATGTGCCATGCGAA
TGTATCGCCCATGGCGATAGAAAAGAAGAGGAGAGGTCAAGATGGGAAGG
ACGGAAGTGTTGAGAGGGGGGAAAGCATGACGCATAGACTCAAGGGAAGA
GAACTGGATGAGGAAAATGGAAATGGAGCCACGCTAAGCACGGGACACGA
ATGTGGATTTGATATGGTCGCGTCAGAACCAGGTATGGAGGGGCAGAGAG
TGAAAATTTTAGGAGGTGTAGAGACTGGCAGTGTGGGTTTGGAGGGAGAT
GCACGAAAGCATGTATCACGGCAAAGAGAGCATGCGACGCGCTCATCTAT
TAAAATACGAGAGCGTTTGCCAGTTCGGAAAGCGATGCCTTCGACTTTAC
AATCAAACCCCAAAGCATCTATCAATCGAAGGACATATGCCTATCGGCGG
GTCCTTCATGACATGTGCATGCCTGACAACGAAATATGA back to top
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