EWM27420.1, cds3251 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27420.1 vs. NCBI_GenBank
Match: gi|585109655|gb|EWM27420.1| (hypothetical protein Naga_100138g1 [Nannochloropsis gaditana]) HSP 1 Score: 1249.96 bits (3233), Expect = 0.000e+0 Identity = 612/612 (100.00%), Postives = 612/612 (100.00%), Query Frame = 0 Query: 1 MHSISCFKCAGTGRVQIKRKVKRSHCAQDSPNDTPQSLTPLPKLQLAADEALVTKGNRTAQITRTCHVCQGRGEIVSTKKRRGMDKTGVVTIPRRPPDFKLRGPLRPSSMTSPQPQAGEALCCLSGDWRIFQPVGGHRYSTDDVVTAWIAGEEMRRGWGRELLRGVESDKADGKCAGLLLIRGGGEKQADGRREEVVRGAQEQGEGLRGLDLGCGLGSVLMMVCWQLPRLHAVGIEAQASSVERARRSLLVNGCADRACVRHGDFRNFFPLSSSGSAAAKIRTSLPAPPPPLSPLVSSSSSLSSPEPRAFEARTFHLITGTPPYFDGHGAPAPFHPADPPISVTSLSSCTSSTSSLALQSSPSTTSTVLKTKSGKARLRPSLLPAAEDQRPCNFELRGGVEAYIQTAVVALSGRGIFVMCASDLPGVEARVLRAAAAEDLTVLRKVEVEPKEGQPNLFAVYTMCHANVSPMAIEKKRRGQDGKDGSVERGESMTHRLKGRELDEENGNGATLSTGHECGFDMVASEPGMEGQRVKILGGVETGSVGLEGDARKHVSRQREHATRSSIKIRERLPVRKAMPSTLQSNPKASINRRTYAYRRVLHDMCMPDNEI 612 MHSISCFKCAGTGRVQIKRKVKRSHCAQDSPNDTPQSLTPLPKLQLAADEALVTKGNRTAQITRTCHVCQGRGEIVSTKKRRGMDKTGVVTIPRRPPDFKLRGPLRPSSMTSPQPQAGEALCCLSGDWRIFQPVGGHRYSTDDVVTAWIAGEEMRRGWGRELLRGVESDKADGKCAGLLLIRGGGEKQADGRREEVVRGAQEQGEGLRGLDLGCGLGSVLMMVCWQLPRLHAVGIEAQASSVERARRSLLVNGCADRACVRHGDFRNFFPLSSSGSAAAKIRTSLPAPPPPLSPLVSSSSSLSSPEPRAFEARTFHLITGTPPYFDGHGAPAPFHPADPPISVTSLSSCTSSTSSLALQSSPSTTSTVLKTKSGKARLRPSLLPAAEDQRPCNFELRGGVEAYIQTAVVALSGRGIFVMCASDLPGVEARVLRAAAAEDLTVLRKVEVEPKEGQPNLFAVYTMCHANVSPMAIEKKRRGQDGKDGSVERGESMTHRLKGRELDEENGNGATLSTGHECGFDMVASEPGMEGQRVKILGGVETGSVGLEGDARKHVSRQREHATRSSIKIRERLPVRKAMPSTLQSNPKASINRRTYAYRRVLHDMCMPDNEI Sbjct: 1 MHSISCFKCAGTGRVQIKRKVKRSHCAQDSPNDTPQSLTPLPKLQLAADEALVTKGNRTAQITRTCHVCQGRGEIVSTKKRRGMDKTGVVTIPRRPPDFKLRGPLRPSSMTSPQPQAGEALCCLSGDWRIFQPVGGHRYSTDDVVTAWIAGEEMRRGWGRELLRGVESDKADGKCAGLLLIRGGGEKQADGRREEVVRGAQEQGEGLRGLDLGCGLGSVLMMVCWQLPRLHAVGIEAQASSVERARRSLLVNGCADRACVRHGDFRNFFPLSSSGSAAAKIRTSLPAPPPPLSPLVSSSSSLSSPEPRAFEARTFHLITGTPPYFDGHGAPAPFHPADPPISVTSLSSCTSSTSSLALQSSPSTTSTVLKTKSGKARLRPSLLPAAEDQRPCNFELRGGVEAYIQTAVVALSGRGIFVMCASDLPGVEARVLRAAAAEDLTVLRKVEVEPKEGQPNLFAVYTMCHANVSPMAIEKKRRGQDGKDGSVERGESMTHRLKGRELDEENGNGATLSTGHECGFDMVASEPGMEGQRVKILGGVETGSVGLEGDARKHVSRQREHATRSSIKIRERLPVRKAMPSTLQSNPKASINRRTYAYRRVLHDMCMPDNEI 612
BLAST of EWM27420.1 vs. NCBI_GenBank
Match: gi|553187015|ref|XP_005854533.1| (methyltransferase small, partial [Nannochloropsis gaditana CCMP526] >gi|422294527|gb|EKU21827.1| methyltransferase small, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 472.626 bits (1215), Expect = 2.018e-162 Identity = 230/232 (99.14%), Postives = 231/232 (99.57%), Query Frame = 0 Query: 115 PQAGEALCCLSGDWRIFQPVGGHRYSTDDVVTAWIAGEEMRRGWGRELLRGVESDKADGKCAGLLLIRGGGEKQADGRREEVVRGAQEQGEGLRGLDLGCGLGSVLMMVCWQLPRLHAVGIEAQASSVERARRSLLVNGCADRACVRHGDFRNFFPLSSSGSAAAKIRTSLPAPPPPLSPLVSSSSSLSSPEPRAFEARTFHLITGTPPYFDGHGAPAPFHPADPPISVTSL 346 PQAGEALCCLSGDWRIFQPVGGHRYSTDDVVTAWIAGEEMRRGWGRELLRGVESDKADG+CAGLLLIRGGGEKQADGRREEVVRGAQEQGEGLRGLDLGCGLGSVLMMVCWQLPRLHAVGIEAQASSVERARRSLLVNGCADRACVRHGDFRNFFPLSSSGSAAAKIRTSLPAPPPPLSPLVSSSSSLSSPEPRAFEARTFHLITGTPPYFDGHGAPAP HPADPPISVTSL Sbjct: 1 PQAGEALCCLSGDWRIFQPVGGHRYSTDDVVTAWIAGEEMRRGWGRELLRGVESDKADGECAGLLLIRGGGEKQADGRREEVVRGAQEQGEGLRGLDLGCGLGSVLMMVCWQLPRLHAVGIEAQASSVERARRSLLVNGCADRACVRHGDFRNFFPLSSSGSAAAKIRTSLPAPPPPLSPLVSSSSSLSSPEPRAFEARTFHLITGTPPYFDGHGAPAPSHPADPPISVTSL 232
BLAST of EWM27420.1 vs. NCBI_GenBank
Match: gi|1032153704|gb|OAO17012.1| (O-methyltransferase [Blastocystis sp. ATCC 50177/Nand II]) HSP 1 Score: 153.68 bits (387), Expect = 1.299e-38 Identity = 115/348 (33.05%), Postives = 150/348 (43.10%), Query Frame = 0 Query: 114 QPQAGEALCCLSGDWRIFQPVGGHRYSTDDVVTAWIAGEEMRRGWGRELLRGVESDKADGKCAGLLLIRGGGEKQADGRREEVVRGAQEQGEGLRG-LDLGCGLGSVLMMVCWQLPRLHAVGIEAQASSVERARRSLLVNGCADRACVRHGDFRNFFPLSSSGSAAAKIRTSLPAPPPPLSPLVSSSSSLSSPEPRAFEARTFHLITGTPPYFDGHGAPAPFHPADPPISVTSLSSCTSSTSSLALQSSPSTTSTVLKTKSGKARLRPSLLPAAEDQRPCNFELRGGVEAYIQTAVVALSGRGIFVMCASDLPGVEARVLRAAAAEDLTVLRKVEVEPKEGQPNLFAV 460 QP+AGEA+C L G W+IFQ GGHR+STDDV TAW+A C +V++ QE+G + LD+GCGLGSVLMMV W+ P L + GIEAQ S E ARRSL NG ADR V +GD R+ P+V S PR F ++TGTPPYF K G+A LP+ DQ+ C FE RGGVE Y++ A L+ G FV+ S L +AR A ++ ++R+ + PKEG+P LF++ Sbjct: 27 QPKAGEAVCSLVGKWKIFQKQGGHRFSTDDVTTAWVA------------------------C-------------------KVIKELQERGVDVSTHLDMGCGLGSVLMMVGWKYPHLQSTGIEAQKISCELARRSLRYNGAADRISVVNGDLRD--------------------------PVVLPDS------PR------FPIVTGTPPYF----------------------------------------------KEGEA-----ALPSKVDQKACLFEFRGGVEEYVKAARRYLTEEGHFVVVESALG--KARFDAAVKEYEMRIVRRWDFIPKEGKPALFSI 240
BLAST of EWM27420.1 vs. NCBI_GenBank
Match: gi|397614754|gb|EJK62993.1| (hypothetical protein THAOC_16374 [Thalassiosira oceanica]) HSP 1 Score: 128.642 bits (322), Expect = 1.778e-27 Identity = 129/425 (30.35%), Postives = 166/425 (39.06%), Query Frame = 0 Query: 98 DFKLRGPLRPSSMTSPQPQAGEALCCLSGDWRIFQPVGGHRYSTDDVVTAWIAGEEMRRGWGRELLRGVESDKADGKCAGLLLIRGGGEKQADGRREEVVRGAQEQGEGLRGLDLGCGLGSVLMMVCWQL---------PRLHAVGIEAQASSVERARRSLLVN-------------GCADRACVRH------GDFRNFFPLSSSGSAAAKIRTSLPAPPPPLSPLVSSSSSLSSPEPRAFEARTFHLITGTPPYFDGHGAPAPFHPADPPISVTSLSSCTSSTSSLALQSSPSTTSTVLKTKSGKARLRPSLLPAAEDQRPCNFELRGGVEAYIQTAVVALSGRGIFVMCASDLPGVEARVLRAAAAEDLTVLRKVEVEPKEGQPNLFAVYTMCHANVSPMAIEKKRRGQDGKDGSVERGESMT 494 D + GP+ P GE LC L G WRI Q VG HR++TDD+VTA+ CA L + A GR E G + LDLG G SVL MV W + L VG+EA++ +V A RSL N C D VRH GDFR+ LS G A + S S R +R F LITGTPPYF T + + ++ V+++ A +R +P + P E RGGVEAY TA LS G FV+C + L + RV A L V + V +EG+P LFAVYTM M +RG +G DG+ RG+ +T Sbjct: 176 DVPVAGPVEGLDWLPSAP--GEQLCNLVGRWRILQRVGSHRWTTDDLVTAY--------------------------CAATALSASFSKVDACGR---------ENGRVINYLDLGTGNASVLQMVSWHILSHGSATGVTDLRGVGVEARSEAVGLACRSLSFNLGNVELNDGTVYTSCGDGGAVRHEVGVVKGDFRDLVALSKEGGGATE----------------GRSESEEEGAMRLVASRRFDLITGTPPYF----------------------RVDFKTKKVGGGGTAASDGNVVES----AVIRQGAMPTSVQSAPARCEFRGGVEAYCATASSLLSPDGTFVVCENWLN--DGRVWDGAERAGLDVTSVLPVVGREGKPTLFAVYTMRKRAGKEM---NGQRGGNG-DGAQRRGDGVT 515
BLAST of EWM27420.1 vs. NCBI_GenBank
Match: gi|290976770|ref|XP_002671112.1| (predicted protein [Naegleria gruberi] >gi|284084678|gb|EFC38368.1| predicted protein [Naegleria gruberi]) HSP 1 Score: 115.161 bits (287), Expect = 8.879e-23 Identity = 96/314 (30.57%), Postives = 133/314 (42.36%), Query Frame = 0 Query: 114 QPQAGEALCCLSGDWRIFQPVGGHRYSTDDVVTAWIAGEEMRRGWGRELLRGVESDKADGKCAGLLLIRGGGEKQADGRREEVVRGAQEQGEGLRGLDLGCGLGSVLMMVCWQLP-RLHAVGIEAQASSVERARRSLLVNGCAD--RACVRHGDFRNFFPLSSSGSAAAKIRTSLPAPPPPLSPLVSSSSSLSS-PEPRAFEARTFHLITGTPPYFDGHGAPAPFHPADPPISVTSLSSCTSSTSSLALQSSPSTTSTVLKTKSGK---ARLRPSLLPAAEDQRPCNFELRGGVEAYIQTAVVALSG-RGIFVM 419 QP+ GE LC L G WRIFQ GGHR++TDD+VTAW A ++ L+R + + E+ AD + E+++ LD+GCG GSVLMMV +P +G+EA++ +V ARRS+ N D R VR+ DFR ++S++ ++ PE F F L+TGTPPYF K S K A +R +P+ +D P E RGG+EAY Q A VA+ G+FVM Sbjct: 91 QPKEGEQLCGLVGGWRIFQKKGGHRWTTDDIVTAWAACTAVKTIL--PLIRKFNRENQPSSSSSSSTDISIEEEDADIKWEDLISNY---------LDIGCGNGSVLMMVARNMPLTTKCIGVEARSEAVSLARRSIAFNCGLDSTRIQVRNRDFRE----------------------------INSNTMMNVLPEGSGF----FDLVTGTPPYF----------------------------------------RVNFKHNSNKVEEALIRQGGMPSNKDSCPARCEFRGGIEAYCQAASVAMKPMSGVFVM 321
BLAST of EWM27420.1 vs. NCBI_GenBank
Match: gi|763382014|ref|WP_044239183.1| (SAM-dependent methyltransferase [Chondromyces apiculatus]) HSP 1 Score: 106.301 bits (264), Expect = 1.177e-21 Identity = 82/232 (35.34%), Postives = 101/232 (43.53%), Query Frame = 0 Query: 84 MDKTGVVTIPRRPPDFKLRGP--LRPSSMTSPQPQAGEALCCLSGDWRIFQPVGGHRYSTDDVVTAWIAGEEMRRGWGRELLRGVESDKADGKCAGLLLIRGGGEKQADGRREEVVRGAQEQGEGLRGLDLGCGLGSVLMMVCWQLPRLHAVGIEAQASSVERARRSLLVNGCADRACVRHGDFRNFFPLSSSGSAAAKIRTSLPAPPPPLSPLVSSSSSLSSPEPRAFEAR 313 + G+V RRP +K GP + P+ P AGE LC L+GD+RI Q V GHR+S DD+VTAW A E+ C G D R R +DLGCG+G+VL+ W+ P G+EAQ S ARRS+ NG R VRHGD R P+S G A + T PP L P SS P FE R Sbjct: 16 LSTGGIVRPARRPAGWKAPGPRPVTPADRPEVWPGAGEDLCYLAGDFRILQRVDGHRWSADDLVTAWFAAEQ---------------------CGG------------DPPR--------------RTVDLGCGIGTVLLCTAWRFPEARCTGVEAQEVSAGLARRSVAWNGLEGRVDVRHGDMRE--PVSLEGLGPADLVTGT---PPYLPPGTGIESSRVQCAPCRFEHR 195
BLAST of EWM27420.1 vs. NCBI_GenBank
Match: gi|599568825|gb|EYF06819.1| (tRNA (adenine37-N(6))-methyltransferase TrmN6 [Chondromyces apiculatus DSM 436]) HSP 1 Score: 106.301 bits (264), Expect = 1.355e-21 Identity = 82/232 (35.34%), Postives = 101/232 (43.53%), Query Frame = 0 Query: 84 MDKTGVVTIPRRPPDFKLRGP--LRPSSMTSPQPQAGEALCCLSGDWRIFQPVGGHRYSTDDVVTAWIAGEEMRRGWGRELLRGVESDKADGKCAGLLLIRGGGEKQADGRREEVVRGAQEQGEGLRGLDLGCGLGSVLMMVCWQLPRLHAVGIEAQASSVERARRSLLVNGCADRACVRHGDFRNFFPLSSSGSAAAKIRTSLPAPPPPLSPLVSSSSSLSSPEPRAFEAR 313 + G+V RRP +K GP + P+ P AGE LC L+GD+RI Q V GHR+S DD+VTAW A E+ C G D R R +DLGCG+G+VL+ W+ P G+EAQ S ARRS+ NG R VRHGD R P+S G A + T PP L P SS P FE R Sbjct: 17 LSTGGIVRPARRPAGWKAPGPRPVTPADRPEVWPGAGEDLCYLAGDFRILQRVDGHRWSADDLVTAWFAAEQ---------------------CGG------------DPPR--------------RTVDLGCGIGTVLLCTAWRFPEARCTGVEAQEVSAGLARRSVAWNGLEGRVDVRHGDMRE--PVSLEGLGPADLVTGT---PPYLPPGTGIESSRVQCAPCRFEHR 196
BLAST of EWM27420.1 vs. NCBI_GenBank
Match: gi|1180867277|ref|WP_084319289.1| (hypothetical protein [Deferrisoma camini]) HSP 1 Score: 103.99 bits (258), Expect = 3.532e-21 Identity = 84/223 (37.67%), Postives = 99/223 (44.39%), Query Frame = 0 Query: 94 RRPPDFKLRGPLRPSSMTSP--QPQAGEALCCLSGDWRIFQPVGGHRYSTDDVVTAWIAGEEMRRGWGRELLRGVESDKADGKCAGLLLIRGGGEKQADGRREEVVRGAQEQGEGLRGLDLGCGLGSVLMMVCWQLPRLHAVGIEAQASSVERARRSLLVNGCADRACVRHGDFRNFFPLSSSGSAAAKIRTSL-PAPPPPLSPLVSSSSSLSSPEPRAFEAR 313 RRP ++ GP+ P QP GE L CLSG W+IFQ GHRYSTDD++TAW A E RR GAQ + R LDLGCG+GSV ++V W+ P VG+EAQA S ARRS+ NG RA +R GDFR+ G R L PP L P SSL P FE R Sbjct: 3 RRPAGWEPPGPVPRGDRGDPDLQPGPGETLDCLSGHWKIFQLRRGHRYSTDDLLTAWYAVEACRRA-----------------------------------------GAQPR----RILDLGCGIGSVGLLVLWRFPGASLVGVEAQAVSAGLARRSVRYNGIGGRAEIRVGDFRD------PGVFRPGERFDLVTGSPPYLVPGEGRRSSLPQRGPCRFEDR 174
BLAST of EWM27420.1 vs. NCBI_GenBank
Match: gi|950895546|ref|XP_014528766.1| (methyltransferase [Blastocystis sp. subtype 4] >gi|902863377|gb|KNB45323.1| methyltransferase [Blastocystis sp. subtype 4]) HSP 1 Score: 106.301 bits (264), Expect = 4.007e-21 Identity = 95/327 (29.05%), Postives = 121/327 (37.00%), Query Frame = 0 Query: 135 GGHRYSTDDVVTAWIAGEEMRRGWGRELLRGVESDKADGKCAGLLLIRGGGEKQADGRREEVVRGAQEQGEGLRGLDLGCGLGSVLMMVCWQLPRLHAVGIEAQASSVERARRSLLVNGCADRACVRHGDFRNFFPLSSSGSAAAKIRTSLPAPPPPLSPLVSSSSSLSSPEPRAFEARTFHLITGTPPYF-DGHGAPAPFHPADPPISVTSLSSCTSSTSSLALQSSPSTTSTVLKTKSGKARLRPSLLPAAEDQRPCNFELRGGVEAYIQTAVVALSGRGIFVMCASDLPGVEARVLRAAAAEDLTVLRKVEVEPKEGQPNLFAV 460 GGHR+STDDV TAW+A E+ RG+E LD+GCGLGSVLMMV W+ P L +VGIEAQ S A RS+ NG R V +GD R+ + LP E F +ITGTPPYF +G GA L A DQ+ C FE RGGVEAYI+ A L +G FV+ S L + R+ + + V+ + + PKEG+ LF + Sbjct: 22 GGHRFSTDDVTTAWVACREI----ASLRSRGIEVSSH--------------------------------------LDMGCGLGSVLMMVGWKYPDLQSVGIEAQKISCGLASRSIRFNGAEARMKVYNGDLRD--------------KGILP------------------------ENSKFDVITGTPPYFKEGEGA----------------------------------------------------LSAKVDQKACLFEFRGGVEAYIEAAHRYLKDQGRFVVVESALG--QKRIDESCKVNGMRVVERWDFIPKEGKRPLFVI 214
BLAST of EWM27420.1 vs. NCBI_GenBank
Match: gi|501191931|ref|WP_012234949.1| (hypothetical protein [Sorangium cellulosum] >gi|161161171|emb|CAN92476.1| hypothetical protein sce2317 [Sorangium cellulosum So ce56]) HSP 1 Score: 99.7525 bits (247), Expect = 1.523e-19 Identity = 72/203 (35.47%), Postives = 92/203 (45.32%), Query Frame = 0 Query: 86 KTGVVTIPRRPPDFKLRGPLRPSSMTSPQ--PQAGEALCCLSGDWRIFQPVGGHRYSTDDVVTAWIAGEEMRRGWGRELLRGVESDKADGKCAGLLLIRGGGEKQADGRREEVVRGAQEQGEGLRGLDLGCGLGSVLMMVCWQLPRLHAVGIEAQASSVERARRSLLVNGCADRACVRHGDFRNFFPLSSSGSAAAKIRTSLP 286 + GVV RRPP + GP RP++ P+ P GE LC LSGD+RI Q + GHR+S DD+VTAW A E + A RR +DLGCG+G+VL+ W+ P G+EAQ S ARRS+ NG R VR GD R+ P G A A++ T P Sbjct: 17 RGGVVRPARRPPGWVAPGP-RPATPDRPEVWPGPGEDLCYLSGDFRILQRLDGHRWSADDLVTAWFAAERV--------------------------------AHAPPRRT---------------VDLGCGIGTVLLFTAWRFPDARCAGVEAQEVSASMARRSVAWNGVDARGEVRWGDLRD--PAVLDGLAPAELVTGTP 169 The following BLAST results are available for this feature:
BLAST of EWM27420.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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