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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100482g3.2386.mrna |
| Orig protein id | gnl|cribi|Naga_100482g3.2386 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:1111987..1114094 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3246 ID=rna3246|Name=rna3246|organism=Nannochloropsis gaditana|type=mRNA|length=840bp
ATGGTGCAGCTGAGGAAGAGGGAGGTCCCTTCCGGGCACAGCAGCGGAAT
TCTCCGGCCCATTCCTATCCTGTATCCCTTCCTCTTTTTCACTGTATGCT
TGCCGATCTTCACAAATGCATTGGGCTTCCAAGACATACGTGATGGATTT
GTGGGTGCGTCGGATGATATAAAGGAAGGCTTAAGCGGGCTGCGGCTCCC
CGGGATGTGCGCATACTACGACCCCATCCACGACCGCTGCCATGTGGATA
GCAAGAATGGTGTGCGCACCGAGGTGGCAGGCCGGTGCTCGGAGAGTATG
AGGGGCATAATTCCTACCTGCAGTGGTCATTTGGATGCTTATTCGCCACC
ACAACCAGACTCTATGCCCGCCCCAGCAACGCCAGTGGAAGTGGACGCCA
CTGGCAATATTGAACAACCACCGTCGCTTCCCCCATCTCCACCATCCGAG
CCATCCCCTCCCAAGCCGCCCGTCCGAGCGCCTCCTGAGAAAGACGCCGC
CAGAGTTCCATCCTCTCCTTTCCCCAAGATCCCTCCATTCTGGAAGAACA
GAGACAGAGATCCAACCAAAGGACCCGAGGAAGGAGATCATGACCAAGGG
GCGGACCCAAAACCTGGAGGCATGAAAGGTTTTGCCTTGTTTGCCGTACT
CATTGGGGCAGCGATCCTCGCAGCCGTACTCTCAGTTACGGGCGTCGGAT
ACTACGCCTATCACACTCGGAGAAAAGCCTGGCGACGTCAAGAACAACTT
TTGCAAGCAAGGCAAGCACGGGCGCAGGCGCGTATAAGTTATGCTGAGAC
TTCGCCGCAGGTGGTCACTCCCCGCTCTCTTGGATTGTAA back to topprotein sequence of rna3246 >rna3246-protein ID=rna3246-protein|Name=rna3246|organism=Nannochloropsis gaditana|type=polypeptide|length=286bp
MPPKAKANKKADTKRAEKLIEDKTFGLKNKNKSKKVQQYVQAVTTQTKHN
IGVKTEAEKAAAAKAKKEAKEKEDVELKLLFMQMQAGAGKTSKAMEAAAE
AQKAKREAAMKAKGGQGAAQWIEIDMTGKPLEEVIEYERQKLAFFKKNVT
PVTEESFARWKKEKAEKRKRENAEKVKAEIAKKTKGKGLSVLSGKALFEY
DAALFVDDEEAGEEQVDVKKLRSLMEEEEDRDGEGEEGLAVAVQESLYLE
GEGEDDDLDDLEDEEEEEEEAEGEGGGAAGEGEKTG back to topmRNA from alignment at CM002460.1:1111987..1114094+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3246 ID=rna3246|Name=rna3246|organism=Nannochloropsis gaditana|type=mRNA|length=2108bp|location=Sequence derived from alignment at CM002460.1:1111987..1114094+ (Nannochloropsis gaditana)
CCTTCACGACGCTCACTTTCGTGCCTTACGCCTCACAAAATCAGGCATAC
ATACATAGATACATACCGAATCCTCCATAAAGCGCGAGTCAGGGGCTCTT
AGGCACAAGGTTGCTTCACCTAAGTAAGCTTTCCTCATGGCCAATACCAT
GTTTTTTTTAATCTCTTCAATTCCTGCTTTGGTGTCTTTTGTCCAGAAAA
GAAGAATGTTCTTGTATGATACTCTCCGCGCCTTTAATACCTTCGCAGCG
TTAATTTTCCCTTGCATTGTCCACTCGCAGTATAAGAAACGATAATGCCT
CCAAAGGCGAAAGCAAACAAGAAAGCCGATACAAAAAGGGCCGAAAAACT
GATAGAAGACAAGACATTTGGCCTCAAAAACAAGAACAAGAGTAAAAAGG
TGCGACATTTCCAGACGATCGGCCGCACAGCGGAAGCCGCGGAGCTTTCG
TGCGCTGACACTGGCCGCATCTGCATGATTTTGCTGTGTTTCCGGCTAAC
CCTTTCATCTCCTCGTACAGGTCCAGCAATATGTGCAAGCAGTGACCACG
CAGACGAAACACAACATCGGCGTCAAAACCGAGGCAGAAAAAGCGGCGGC
TGCCAAAGCCAAGAAAGaagccaaggagaaggaggatgtggagcTGAAGC
TGTTGTTCATGCAGGTTggtggaggggttggaggcaTTGGCCACCGGACG
ATAGGACGGAgggttgaggaaagggaggtcaGATAGCGTAGggtgcgtgg
aggaggagacggggcaCAGGAAAGGCAGGTGCCTGTCCGACTGGGACGAC
GTGCAGGAATAGGGGCGTGGTCTCTAActcgaccctcccttccagatGCA
AGCTGGCGCGGGCAAGACGAGCAAGGCGATGGAAGCAGCGGCAGAAGCCC
AGAAGGCGAAAAGGGAAGCGGCCATGAAGGCCAAAGGCGGTCAAGGGGCC
GCGCAGTGGATCGAGATCGACATGACCGGGAAGccgttggaggaggtagg
gagggaggcagggggggagagagcgtCGAGGAGCAGTAGGAGTGGCGAGT
TGAAGATGATGCGGCTCTCGGGTGCTGATGCTTGATCCGTGTCGCACGCT
GCCGGGCCCCTGACGgcggtgcctccctcccttttcgctTATCCGCAGGT
CATCGAGTACGAGCGGCAGAAGCTGGCCTTCTTCAAGAAGAATGTGACGC
CGGTGACGGTAAGCcccaagagagggaggacgggagggagaggagagacg
CAGGATTGAGTCTCATGTGGCCTTTTTGACAGGAGGAGTCGTTCGCGcgc
tggaagaaggagaaggcggagaagaggaaacgaGAGAACGCAgagaaggt
gagggggaggaagggggggagggagggagggcgggggaggaaggaaggga
gggagggagggagggaggaagcggtacGAACCTTGAAGCGTTTGTGGGCT
GGGGCATCACTATGACATATCGGGAAGGGCGACCAGGTCCGGTCATCGGA
CCGCACTATCCTTCCACTTCtctgacttcctccctccttccctccctcac
tccttccccccctccctccctctcttccttcctttctcccagGTGAAGGC
AGAGATCGCCAAGAAGACAAAGGGGAAAGGTCTGAGCGTTTTGAGTGGAA
AGGCTCTCTTTGAATACGATGCCGCCCTGTTCgttgatgacgaggaggcg
ggggaggagcaggtggaCGTGAAGAAGTTGAGGTCtctgatggaagagga
agaggatagggacggagaaggggaagaggggctggcAGTGGCGGTACAGG
AGAGTTTGTatctggaaggggagggggaggatgacgattTGGACGATtta
gaagacgaggaggaggaggaggaggaggcggagggggagggggggggcgc
ggcgggggagggggaaaaaactGGGTAAGAAGATATAGAGTGTACAGGGG
ATTAGGGAGAGGCGCTACTCGTCCGCATGGAGCTGTCAaggccgtgggag
aggaggcatggagggagggatgggaagggggaagggtaTCGTAGAGCAAA
GTTCTGCTGCAGTTAAGAACAAAATGTTCGCGCTTAAGAATGATGAATTC
TCCATGAC back to topCoding sequence (CDS) from alignment at CM002460.1:1111987..1114094+ >rna3246 ID=rna3246|Name=rna3246|organism=Nannochloropsis gaditana|type=CDS|length=5166bp|location=Sequence derived from alignment at CM002460.1:1111987..1114094+ (Nannochloropsis gaditana)
ATGCCTCCAAAGGCGAAAGCAAACAAGAAAGCCGATACAAAAAGGGCCGA
AAAACTGATAGAAGACAAGACATTTGGCCTCAAAAACAAGAACAAGAGTA
AAAAGGTCCAGCAATATGTGCAAGCAGTGACCACGCAGACGAAACACAAC
ATCGGCGTCAAAACCGAGGCAGAAAAAGCGGCGGCTGCCAAAGCCAAGAA
AGaagccaaggagaaggaggatgtggagcTGAAGCTGTTGTTCATGCAGa
tGCAAGCTGGCGCGGGCAAGACGAGCAAGGCGATGGAAGCAGCGGCAGAA
GCCCAGAAGGCGAAAAGGGAAGCGGCCATGAAGGCCAAAGGCGGTCAAGG
GGCCGCGCAGTGGATCGAGATCGACATGACCGGGAAGccgttggaggagG
TCATCGAGTACGAGCGGCAGAAGCTGGCCTTCTTCAAGAAGAATGTGACG
CCGGTGACGGAGGAGTCGTTCGCGcgctggaagaaggagaaggcggagaa
gaggaaacgaGAGAACGCAgagaagGTGAAGGCAGAGATCGCCAAGAAGA
CAAAGGGGAAAGGTCTGAGCGTTTTGAGTGGAAAGGCTCTCTTTGAATAC
GATGCCGCCCTGTTCgttgatgacgaggaggcgggggaggagcaggtgga
CGTGAAGAAGTTGAGGTCtctgatggaagaggaagaggatagggacggag
aaggggaagaggggctggcAGTGGCGGTACAGGAGAGTTTGTatctggaa
ggggagggggaggatgacgattTGGACGATttagaagacgaggaggagga
ggaggaggaggcggagggggagggggggggcgcggcgggggagggggaaa
aaactGGGTAAATGCCTCCAAAGGCGAAAGCAAACAAGAAAGCCGATACA
AAAAGGGCCGAAAAACTGATAGAAGACAAGACATTTGGCCTCAAAAACAA
GAACAAGAGTAAAAAGGTCCAGCAATATGTGCAAGCAGTGACCACGCAGA
CGAAACACAACATCGGCGTCAAAACCGAGGCAGAAAAAGCGGCGGCTGCC
AAAGCCAAGAAAGaagccaaggagaaggaggatgtggagcTGAAGCTGTT
GTTCATGCAGatGCAAGCTGGCGCGGGCAAGACGAGCAAGGCGATGGAAG
CAGCGGCAGAAGCCCAGAAGGCGAAAAGGGAAGCGGCCATGAAGGCCAAA
GGCGGTCAAGGGGCCGCGCAGTGGATCGAGATCGACATGACCGGGAAGcc
gttggaggagGTCATCGAGTACGAGCGGCAGAAGCTGGCCTTCTTCAAGA
AGAATGTGACGCCGGTGACGGAGGAGTCGTTCGCGcgctggaagaaggag
aaggcggagaagaggaaacgaGAGAACGCAgagaagGTGAAGGCAGAGAT
CGCCAAGAAGACAAAGGGGAAAGGTCTGAGCGTTTTGAGTGGAAAGGCTC
TCTTTGAATACGATGCCGCCCTGTTCgttgatgacgaggaggcgggggag
gagcaggtggaCGTGAAGAAGTTGAGGTCtctgatggaagaggaagagga
tagggacggagaaggggaagaggggctggcAGTGGCGGTACAGGAGAGTT
TGTatctggaaggggagggggaggatgacgattTGGACGATttagaagac
gaggaggaggaggaggaggaggcggagggggagggggggggcgcggcggg
ggagggggaaaaaactGGGTAAATGCCTCCAAAGGCGAAAGCAAACAAGA
AAGCCGATACAAAAAGGGCCGAAAAACTGATAGAAGACAAGACATTTGGC
CTCAAAAACAAGAACAAGAGTAAAAAGGTCCAGCAATATGTGCAAGCAGT
GACCACGCAGACGAAACACAACATCGGCGTCAAAACCGAGGCAGAAAAAG
CGGCGGCTGCCAAAGCCAAGAAAGaagccaaggagaaggaggatgtggag
cTGAAGCTGTTGTTCATGCAGatGCAAGCTGGCGCGGGCAAGACGAGCAA
GGCGATGGAAGCAGCGGCAGAAGCCCAGAAGGCGAAAAGGGAAGCGGCCA
TGAAGGCCAAAGGCGGTCAAGGGGCCGCGCAGTGGATCGAGATCGACATG
ACCGGGAAGccgttggaggagGTCATCGAGTACGAGCGGCAGAAGCTGGC
CTTCTTCAAGAAGAATGTGACGCCGGTGACGGAGGAGTCGTTCGCGcgct
ggaagaaggagaaggcggagaagaggaaacgaGAGAACGCAgagaagGTG
AAGGCAGAGATCGCCAAGAAGACAAAGGGGAAAGGTCTGAGCGTTTTGAG
TGGAAAGGCTCTCTTTGAATACGATGCCGCCCTGTTCgttgatgacgagg
aggcgggggaggagcaggtggaCGTGAAGAAGTTGAGGTCtctgatggaa
gaggaagaggatagggacggagaaggggaagaggggctggcAGTGGCGGT
ACAGGAGAGTTTGTatctggaaggggagggggaggatgacgattTGGACG
ATttagaagacgaggaggaggaggaggaggaggcggagggggaggggggg
ggcgcggcgggggagggggaaaaaactGGGTAAATGCCTCCAAAGGCGAA
AGCAAACAAGAAAGCCGATACAAAAAGGGCCGAAAAACTGATAGAAGACA
AGACATTTGGCCTCAAAAACAAGAACAAGAGTAAAAAGGTCCAGCAATAT
GTGCAAGCAGTGACCACGCAGACGAAACACAACATCGGCGTCAAAACCGA
GGCAGAAAAAGCGGCGGCTGCCAAAGCCAAGAAAGaagccaaggagaagg
aggatgtggagcTGAAGCTGTTGTTCATGCAGatGCAAGCTGGCGCGGGC
AAGACGAGCAAGGCGATGGAAGCAGCGGCAGAAGCCCAGAAGGCGAAAAG
GGAAGCGGCCATGAAGGCCAAAGGCGGTCAAGGGGCCGCGCAGTGGATCG
AGATCGACATGACCGGGAAGccgttggaggagGTCATCGAGTACGAGCGG
CAGAAGCTGGCCTTCTTCAAGAAGAATGTGACGCCGGTGACGGAGGAGTC
GTTCGCGcgctggaagaaggagaaggcggagaagaggaaacgaGAGAACG
CAgagaagGTGAAGGCAGAGATCGCCAAGAAGACAAAGGGGAAAGGTCTG
AGCGTTTTGAGTGGAAAGGCTCTCTTTGAATACGATGCCGCCCTGTTCgt
tgatgacgaggaggcgggggaggagcaggtggaCGTGAAGAAGTTGAGGT
Ctctgatggaagaggaagaggatagggacggagaaggggaagaggggctg
gcAGTGGCGGTACAGGAGAGTTTGTatctggaaggggagggggaggatga
cgattTGGACGATttagaagacgaggaggaggaggaggaggaggcggagg
gggagggggggggcgcggcgggggagggggaaaaaactGGGTAAATGCCT
CCAAAGGCGAAAGCAAACAAGAAAGCCGATACAAAAAGGGCCGAAAAACT
GATAGAAGACAAGACATTTGGCCTCAAAAACAAGAACAAGAGTAAAAAGG
TCCAGCAATATGTGCAAGCAGTGACCACGCAGACGAAACACAACATCGGC
GTCAAAACCGAGGCAGAAAAAGCGGCGGCTGCCAAAGCCAAGAAAGaagc
caaggagaaggaggatgtggagcTGAAGCTGTTGTTCATGCAGatGCAAG
CTGGCGCGGGCAAGACGAGCAAGGCGATGGAAGCAGCGGCAGAAGCCCAG
AAGGCGAAAAGGGAAGCGGCCATGAAGGCCAAAGGCGGTCAAGGGGCCGC
GCAGTGGATCGAGATCGACATGACCGGGAAGccgttggaggagGTCATCG
AGTACGAGCGGCAGAAGCTGGCCTTCTTCAAGAAGAATGTGACGCCGGTG
ACGGAGGAGTCGTTCGCGcgctggaagaaggagaaggcggagaagaggaa
acgaGAGAACGCAgagaagGTGAAGGCAGAGATCGCCAAGAAGACAAAGG
GGAAAGGTCTGAGCGTTTTGAGTGGAAAGGCTCTCTTTGAATACGATGCC
GCCCTGTTCgttgatgacgaggaggcgggggaggagcaggtggaCGTGAA
GAAGTTGAGGTCtctgatggaagaggaagaggatagggacggagaagggg
aagaggggctggcAGTGGCGGTACAGGAGAGTTTGTatctggaaggggag
ggggaggatgacgattTGGACGATttagaagacgaggaggaggaggagga
ggaggcggagggggagggggggggcgcggcgggggagggggaaaaaactG
GGTAAATGCCTCCAAAGGCGAAAGCAAACAAGAAAGCCGATACAAAAAGG
GCCGAAAAACTGATAGAAGACAAGACATTTGGCCTCAAAAACAAGAACAA
GAGTAAAAAGGTCCAGCAATATGTGCAAGCAGTGACCACGCAGACGAAAC
ACAACATCGGCGTCAAAACCGAGGCAGAAAAAGCGGCGGCTGCCAAAGCC
AAGAAAGaagccaaggagaaggaggatgtggagcTGAAGCTGTTGTTCAT
GCAGatGCAAGCTGGCGCGGGCAAGACGAGCAAGGCGATGGAAGCAGCGG
CAGAAGCCCAGAAGGCGAAAAGGGAAGCGGCCATGAAGGCCAAAGGCGGT
CAAGGGGCCGCGCAGTGGATCGAGATCGACATGACCGGGAAGccgttgga
ggagGTCATCGAGTACGAGCGGCAGAAGCTGGCCTTCTTCAAGAAGAATG
TGACGCCGGTGACGGAGGAGTCGTTCGCGcgctggaagaaggagaaggcg
gagaagaggaaacgaGAGAACGCAgagaagGTGAAGGCAGAGATCGCCAA
GAAGACAAAGGGGAAAGGTCTGAGCGTTTTGAGTGGAAAGGCTCTCTTTG
AATACGATGCCGCCCTGTTCgttgatgacgaggaggcgggggaggagcag
gtggaCGTGAAGAAGTTGAGGTCtctgatggaagaggaagaggataggga
cggagaaggggaagaggggctggcAGTGGCGGTACAGGAGAGTTTGTatc
tggaaggggagggggaggatgacgattTGGACGATttagaagacgaggag
gaggaggaggaggaggcggagggggagggggggggcgcggcgggggaggg
ggaaaaaactGGGTAA back to top
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