EWM27436.1, cds3237 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM27436.1 vs. NCBI_GenBank
Match: gi|585109684|gb|EWM27436.1| (hypothetical protein Naga_100482g3 [Nannochloropsis gaditana]) HSP 1 Score: 548.51 bits (1412), Expect = 0.000e+0 Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 0 Query: 1 MPPKAKANKKADTKRAEKLIEDKTFGLKNKNKSKKVQQYVQAVTTQTKHNIGVKTEAEKAAAAKAKKEAKEKEDVELKLLFMQMQAGAGKTSKAMEAAAEAQKAKREAAMKAKGGQGAAQWIEIDMTGKPLEEVIEYERQKLAFFKKNVTPVTEESFARWKKEKAEKRKRENAEKVKAEIAKKTKGKGLSVLSGKALFEYDAALFVDDEEAGEEQVDVKKLRSLMEEEEDRDGEGEEGLAVAVQESLYLEGEGEDDDLDDLEDEEEEEEEAEGEGGGAAGEGEKTG 286 MPPKAKANKKADTKRAEKLIEDKTFGLKNKNKSKKVQQYVQAVTTQTKHNIGVKTEAEKAAAAKAKKEAKEKEDVELKLLFMQMQAGAGKTSKAMEAAAEAQKAKREAAMKAKGGQGAAQWIEIDMTGKPLEEVIEYERQKLAFFKKNVTPVTEESFARWKKEKAEKRKRENAEKVKAEIAKKTKGKGLSVLSGKALFEYDAALFVDDEEAGEEQVDVKKLRSLMEEEEDRDGEGEEGLAVAVQESLYLEGEGEDDDLDDLEDEEEEEEEAEGEGGGAAGEGEKTG Sbjct: 1 MPPKAKANKKADTKRAEKLIEDKTFGLKNKNKSKKVQQYVQAVTTQTKHNIGVKTEAEKAAAAKAKKEAKEKEDVELKLLFMQMQAGAGKTSKAMEAAAEAQKAKREAAMKAKGGQGAAQWIEIDMTGKPLEEVIEYERQKLAFFKKNVTPVTEESFARWKKEKAEKRKRENAEKVKAEIAKKTKGKGLSVLSGKALFEYDAALFVDDEEAGEEQVDVKKLRSLMEEEEDRDGEGEEGLAVAVQESLYLEGEGEDDDLDDLEDEEEEEEEAEGEGGGAAGEGEKTG 286
BLAST of EWM27436.1 vs. NCBI_GenBank
Match: gi|553178536|ref|XP_005852567.1| (hypothetical protein NGA_0702800 [Nannochloropsis gaditana CCMP526] >gi|422295964|gb|EKU23263.1| hypothetical protein NGA_0702800 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 464.151 bits (1193), Expect = 4.450e-164 Identity = 241/242 (99.59%), Postives = 241/242 (99.59%), Query Frame = 0 Query: 1 MPPKAKANKKADTKRAEKLIEDKTFGLKNKNKSKKVQQYVQAVTTQTKHNIGVKTEAEKAAAAKAKKEAKEKEDVELKLLFMQMQAGAGKTSKAMEAAAEAQKAKREAAMKAKGGQGAAQWIEIDMTGKPLEEVIEYERQKLAFFKKNVTPVTEESFARWKKEKAEKRKRENAEKVKAEIAKKTKGKGLSVLSGKALFEYDAALFVDDEEAGEEQVDVKKLRSLMEEEEDRDGEGEEGLAVA 242 MPPKAKANKKADTKRAEKLIEDKTFGLKNKNKSKKVQQYVQAVTTQTKHNIGVKTEAEKAAAAKAKKEAKEKEDVELKLLFMQMQAGAGKTSKAMEAAAEAQKAKREAAMKAKGGQGAAQWIEIDMTGKPLEEVIEYERQKLAFFKKNVTPVTEESFARWKKEKAEKRKRENAEKVKAEIAKKTKGKGLSVLSGKALFEYDAALFVDDEEAGEEQVDVKKLRSLMEEEEDRDGE EEGLAVA Sbjct: 1 MPPKAKANKKADTKRAEKLIEDKTFGLKNKNKSKKVQQYVQAVTTQTKHNIGVKTEAEKAAAAKAKKEAKEKEDVELKLLFMQMQAGAGKTSKAMEAAAEAQKAKREAAMKAKGGQGAAQWIEIDMTGKPLEEVIEYERQKLAFFKKNVTPVTEESFARWKKEKAEKRKRENAEKVKAEIAKKTKGKGLSVLSGKALFEYDAALFVDDEEAGEEQVDVKKLRSLMEEEEDRDGEVEEGLAVA 242
BLAST of EWM27436.1 vs. NCBI_GenBank
Match: gi|299473638|emb|CBN78032.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 132.109 bits (331), Expect = 2.576e-33 Identity = 99/236 (41.95%), Postives = 139/236 (58.90%), Query Frame = 0 Query: 1 MPPKAKANKKADTKRAEKLIEDKTFGLKNKNKSKKVQQYVQAVTTQTKHNIGVKTEAEKAAAAK--AKKEAKEKEDVELKLLFMQ-MQAGAGKTSKAMEAAAEAQKAKREAAMKAKGGQGAAQWIEIDMTGKPLEEVIEYERQKLAFFKKNVTPVTEESFARWKKEKAEKRKRENAEKVKAEIAKKTKGKGLSVLSGKALFEYDAALFVDDEEAGEEQVDVKKLRSLMEEEEDRDG 233 MPPK + KKA + ++LIEDKTFGLKNKNKSK VQ+Y+ T Q N + A AA +K A KEAK+ ++ EL LF + + G K A + A A++ K Q ++ I+ K LE++IE +R KL K TPV +E+ A+WK ++ K+ E KV+AE+ KK KGKGLSVLSG+AL++YDA LF DD +A VD ++ +E++D +G Sbjct: 1 MPPKQQKGKKAVATKKKQLIEDKTFGLKNKNKSKSVQKYIS--TVQKSVNSTEQQRASDAAKSKKMASKEAKKAQEAELAALFDEALLTGVKKGGTAGKGKTPA------VAVETKAKQVQETFV-IEEGEKTLEDMIEEQRTKLHREGKQGTPVNQETLAKWKADRKAKKLAEERRKVQAEMKKKNKGKGLSVLSGRALYDYDATLFEDDADA----VDNDTMKQRNDEDDDEEG 223
BLAST of EWM27436.1 vs. NCBI_GenBank
Match: gi|72392905|ref|XP_847253.1| (hypothetical protein [Trypanosoma brucei brucei TREU927] >gi|788011232|ref|XP_011775731.1| hypothetical protein, conserved [Trypanosoma brucei gambiense DAL972] >gi|62176087|gb|AAX70206.1| hypothetical protein, conserved [Trypanosoma brucei] >gi|70803283|gb|AAZ13187.1| hypothetical protein, conserved [Trypanosoma brucei brucei TREU927] >gi|261330470|emb|CBH13454.1| hypothetical protein, conserved [Trypanosoma brucei gambiense DAL972]) HSP 1 Score: 89.7373 bits (221), Expect = 8.810e-18 Identity = 79/220 (35.91%), Postives = 120/220 (54.55%), Query Frame = 0 Query: 9 KKADTKRAEKLIEDKTFGLKNKNKSKKVQQYVQAVTTQTKHNIGVKTEAEKAAAAKAKKEAKEKEDVELKLLFMQMQAGAGKTSKAMEAAAEAQKAKR-EAAMKAKG-------GQGAAQWI-------EIDMTGKPLEEVIEYERQKLAFFKKNVTPVTEESFARWKKEKAEKRKRENAEKVKAEIAKKTKGKGLSVLSGKALFEYDAALFVDDEEAGE 213 KKA+ K+ EK++EDKTFGLKNKN+S KVQ Y+Q+++ N G + ++ +AK++A+E E K M+M + K + + K+K+ E+A A+G G +++ E+ + LEE +E ER+ L + ++TPVTEESF WK K ++E AE A + K G+G L G L++ D LFVDDE+A E Sbjct: 3 KKAEQKKREKIVEDKTFGLKNKNRSSKVQSYIQSISKSV--NQGNPNDRKRNEDLEAKRKARE----EKKAFEMEM----ARLFKDVSTVNKQDKSKQEESANNAEGEEVDKNLGCAPDEYLFRPEDFDEVQYDERRLEEQLEAEREALK-GRSDLTPVTEESFQAWKAAK----RQEAAEADAARVRKAKAGEG--KLRGWDLWQMDKELFVDDEDADE 205
BLAST of EWM27436.1 vs. NCBI_GenBank
Match: gi|1115873907|emb|SCU68032.1| (hypothetical protein, conserved [Trypanosoma equiperdum]) HSP 1 Score: 89.3521 bits (220), Expect = 1.028e-17 Identity = 79/220 (35.91%), Postives = 120/220 (54.55%), Query Frame = 0 Query: 9 KKADTKRAEKLIEDKTFGLKNKNKSKKVQQYVQAVTTQTKHNIGVKTEAEKAAAAKAKKEAKEKEDVELKLLFMQMQAGAGKTSKAMEAAAEAQKAKR-EAAMKAKG-------GQGAAQWI-------EIDMTGKPLEEVIEYERQKLAFFKKNVTPVTEESFARWKKEKAEKRKRENAEKVKAEIAKKTKGKGLSVLSGKALFEYDAALFVDDEEAGE 213 KKA+ K+ EK++EDKTFGLKNKN+S KVQ Y+Q+++ N G + ++ +AK++A+E E K M+M + K + + K+K+ E+A A+G G +++ E+ + LEE +E ER+ L + ++TPVTEESF WK K ++E AE A + K G+G L G L++ D LFVDDE+A E Sbjct: 3 KKAEQKKREKIVEDKTFGLKNKNRSSKVQSYIQSISKSV--NQGNPNDRKRNEDLEAKRKARE----EKKAFEMEM----ARLFKDVSTVNKQDKSKQEESANNAEGEEVDKNLGCAPDEYLFRPEDFDEVQYDERRLEEQLEAEREALK-GRSDLTPVTEESFQAWKAAK----RQEAAEADAARVRKAKAGEG--KLRGWDLWQMDKELFVDDEDADE 205
BLAST of EWM27436.1 vs. NCBI_GenBank
Match: gi|290994833|ref|XP_002680036.1| (predicted protein [Naegleria gruberi] >gi|284093655|gb|EFC47292.1| predicted protein [Naegleria gruberi]) HSP 1 Score: 90.5077 bits (223), Expect = 1.896e-17 Identity = 78/195 (40.00%), Postives = 110/195 (56.41%), Query Frame = 0 Query: 22 DKTFGLKNKNKSKKVQQYVQAV--TTQTKHNIGVKTEAEKAAAAKAKKEAKEKEDVELKLLFMQMQAGAGKTSKAMEAAAEAQKAKREAAMKAKGGQGAAQWIEIDMTGKPLEEVIEYERQKLAFFKKNVTPVTEESFARWKKEKAEKRKRENAEKVKAEIAKKTK-GKGLSVLSGKALFEYDAALFVDDEEAGE 213 ++TFGLKNKNKSK VQ YV++V T H+ VK E + + +K A++K + ELK LF + K KA EA+ E + E + + A D +EE++E ER K+ + TPVT ESF +WK+ K E++K+E K K ++A K G+G LSG+ LF+ + ALFVDDEEA E Sbjct: 12 EQTFGLKNKNKSKTVQTYVKSVSNTVNQVHDKKVKQEMAEKEKKRLEKLAQKKREQELKDLFKTI--DGKKDEKAEEASTEEGQEGEEVTFDSLEQEMA------DEAELSIEEIVEKERAKIM----DGTPVTYESFTKWKQFKVEQQKKEEERKRKLQMALYEKSGQG---LSGRELFKMNEALFVDDEEADE 191
BLAST of EWM27436.1 vs. NCBI_GenBank
Match: gi|146079238|ref|XP_001463732.1| (conserved hypothetical protein [Leishmania infantum JPCM5] >gi|398011449|ref|XP_003858920.1| hypothetical protein, conserved [Leishmania donovani] >gi|134067819|emb|CAM66099.1| conserved hypothetical protein [Leishmania infantum JPCM5] >gi|322497131|emb|CBZ32202.1| hypothetical protein, conserved [Leishmania donovani]) HSP 1 Score: 87.8113 bits (216), Expect = 4.512e-17 Identity = 81/206 (39.32%), Postives = 114/206 (55.34%), Query Frame = 0 Query: 10 KADTKRAEKLIEDKTFGLKNKNKSKKVQQYVQAV--TTQTKHNIGVKTEAEKAAAAKAKKEAKEKEDVELKLLFMQMQAGAGKTSKAMEAAAEAQKAKREAAMKAKGGQGAAQWIEIDMTGKPLEEVIEYERQKLAFFKKNVTPVTEESFARWKKEKAEKRKRENAEKVKAEIAKKTKGKGLSVLSGKALFEYDAALFVDDEEAGE 213 KA+ K+ EK++EDKTFGLKNKN+S KVQ YVQ V + ++ K++AE AA AK+E + +E EL LF + K A EAA A+ + + + E++ + LEE +E ER+KL + ++TPVTE SF WK+ K E+ + A +V+ AK GK L G L++ D LFVDDE A E Sbjct: 3 KAEQKKKEKIVEDKTFGLKNKNRSAKVQAYVQQVKQSVDQRNPQDRKSQAELAARRAAKEEKRARE-AELAKLFNDVDQQQRKKRDA-EAAETAEGDDQYMCHPEEYLFRPEDFDEVEQDDERLEEKLEAEREKLK-DRTDLTPVTEASFQAWKQRKREEAAEKEAARVRR--AKSGDGK----LRGWDLWQMDQELFVDDENADE 199
BLAST of EWM27436.1 vs. NCBI_GenBank
Match: gi|401416846|ref|XP_003872917.1| (conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] >gi|322489143|emb|CBZ24395.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103]) HSP 1 Score: 87.0409 bits (214), Expect = 8.603e-17 Identity = 80/206 (38.83%), Postives = 113/206 (54.85%), Query Frame = 0 Query: 10 KADTKRAEKLIEDKTFGLKNKNKSKKVQQYVQAV--TTQTKHNIGVKTEAEKAAAAKAKKEAKEKEDVELKLLFMQMQAGAGKTSKAMEAAAEAQKAKREAAMKAKGGQGAAQWIEIDMTGKPLEEVIEYERQKLAFFKKNVTPVTEESFARWKKEKAEKRKRENAEKVKAEIAKKTKGKGLSVLSGKALFEYDAALFVDDEEAGE 213 KA+ K+ EK++EDKTFGLKNKN+S KVQ YVQ V + ++ K++AE A AK+E + +E EL LF + K A EAA A+ + + + E++ + LEE +E ER+KL + ++TPVTE SF WK+ K E+ + A +V+ AK GK L G L++ D LFVDDE A E Sbjct: 3 KAEQKKKEKIVEDKTFGLKNKNRSAKVQAYVQQVKQSVDQRNPQDRKSQAELTARRTAKEEKRARE-AELAKLFNDVDQQQRKKRDA-EAAETAEGDDQYMCHPEEYLFRPEDFDEVEQDDQRLEEKLEAEREKLK-DRTDLTPVTEASFQAWKQRKREEAAEKEAARVRR--AKSGDGK----LRGWDLWQMDQELFVDDENADE 199
BLAST of EWM27436.1 vs. NCBI_GenBank
Match: gi|157865411|ref|XP_001681413.1| (conserved hypothetical protein [Leishmania major strain Friedlin] >gi|68124709|emb|CAJ02793.1| conserved hypothetical protein [Leishmania major strain Friedlin]) HSP 1 Score: 86.2705 bits (212), Expect = 1.495e-16 Identity = 80/206 (38.83%), Postives = 113/206 (54.85%), Query Frame = 0 Query: 10 KADTKRAEKLIEDKTFGLKNKNKSKKVQQYVQAV--TTQTKHNIGVKTEAEKAAAAKAKKEAKEKEDVELKLLFMQMQAGAGKTSKAMEAAAEAQKAKREAAMKAKGGQGAAQWIEIDMTGKPLEEVIEYERQKLAFFKKNVTPVTEESFARWKKEKAEKRKRENAEKVKAEIAKKTKGKGLSVLSGKALFEYDAALFVDDEEAGE 213 KA+ K+ EK++EDKTFGLKNKN+S KVQ YVQ V + ++ K++AE A AK+E + +E EL LF + K A EAA A+ + + + E++ + LEE +E ER+KL + ++TPVTE SF WK+ K E+ + A +V+ AK GK L G L++ D LFVDDE A E Sbjct: 3 KAEQKKKEKIVEDKTFGLKNKNRSTKVQAYVQQVKQSVDQRNPQDRKSQAELLARRAAKEEKRARE-AELAKLFNDVDQQQRKKRDA-EAAETAEGDDQYMCHPEEYLFRPEDFDEVEQDDERLEEKLEAEREKLK-DRTDLTPVTEASFQAWKQRKREEAAEKEAARVRR--AKSGDGK----LRGWDLWQMDQELFVDDENADE 199
BLAST of EWM27436.1 vs. NCBI_GenBank
Match: gi|154333193|ref|XP_001562857.1| (conserved hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] >gi|731689841|ref|XP_010696795.1| hypothetical protein LPMP_100720 [Leishmania panamensis] >gi|134059862|emb|CAM37290.1| conserved hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] >gi|685201891|gb|AIN96142.1| hypothetical protein LPMP_100720 [Leishmania panamensis] >gi|1099056580|emb|CCM13519.1| hypothetical protein, conserved [Leishmania guyanensis]) HSP 1 Score: 84.7297 bits (208), Expect = 4.992e-16 Identity = 79/220 (35.91%), Postives = 114/220 (51.82%), Query Frame = 0 Query: 10 KADTKRAEKLIEDKTFGLKNKNKSKKVQQYVQAV--TTQTKHNIGVKTEAEKAAAAKAKKEAKEKEDVELKLLFMQMQAGAGKTSKAMEAAAEAQKAKREAAMKAKGGQGAAQWI--------------EIDMTGKPLEEVIEYERQKLAFFKKNVTPVTEESFARWKKEKAEKRKRENAEKVKAEIAKKTKGKGLSVLSGKALFEYDAALFVDDEEAGE 213 KA+ K+ EK++EDKTFGLKNKN+S KVQ YVQ V + ++ K+++E AA AK+E + +E EL LF + + Q+ K+ K + G Q++ E++ + LEE +E ER+KL + ++TPVTE SF WK+ K E+ A +V+ AK GK L G L++ D LFVDDE A E Sbjct: 3 KAEQKKKEKIVEDKTFGLKNKNRSAKVQAYVQQVRQSVDQRNPQERKSQSELAARRSAKEEKRARE-AELAKLFNDV---------------DQQQRKKLDGAKVEAADGDDQYMCNPEEYLFRPEDFDEVEKDDERLEEKLEAEREKLK-DRTDLTPVTEVSFQAWKQRKREEAAEMEAARVRR--AKSGDGK----LRGWDLWQMDQELFVDDENADE 199 The following BLAST results are available for this feature:
BLAST of EWM27436.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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