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Properties
| Property Name | Value |
|---|
| Product | conserved unknown protein |
| Orig transcript id | gnl|cribi|Naga_100579g1.6100.mrna |
| Orig protein id | gnl|cribi|Naga_100579g1.6100 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:1096787..1097795 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3241 ID=rna3241|Name=rna3241|organism=Nannochloropsis gaditana|type=mRNA|length=1138bp
GTGGTGGGTGCAAGGAAATCGCGGCTTGCGTATGGAGGATGTTAATTCTT
GACGGGATGGTCATGGCACTGTCCATGTCTCCTCTTGGCTTGTATCCCGT
CGCGGCGTGCGTTCCTACTTCTCAATGCTTTTCATTTACACGGCACATCA
AAACCCCTCACAGAGACGGTATGCTCTCGGTGCTGTCAAGAAATCTTCGC
ACTATCGGTGGATGGGACAGAAGAAGGATAGGTGGTGTACTGCGGGCGCT
GCCCCTGCTATCTTCACAATCACCATCAAGTGGTGCGATACCACCGGGAG
AGCCGCGTATGGGAATAAGTGCCGCGTCAATTTTAGTTGCGCATTTGTCT
ACCGGCTCTTTCCTCAGTCTAAGTGACCTCCATGACAATCCAGGGGCTAA
ACGAGAGCGCAAACGCGTGGGTCGGGGCATTGGTTCTGGATCCGGGAAAA
CGTCAGGCAGGGGCATGAATGGGCAGAAGAAACGATCGAGCGTGAACATC
CCCCAGGGCTTTGAAGGCGGTCAGACGCCCATGCATCGCCGCTTGCCCAA
GACAGGGTTCAAGAACATCTGGGCGGAGCCACTGACCCCACTCCACGTTG
GGACGGTGCAAAATTGGATCGACATGGGCCGTCTCGTGGTTCCTGCCGAC
CGCTTGATGACCATGAAGGACCTGGTGGATGCCGGGATCTTCAAAGCGAA
CAGAGTGAAGCACGGCATCAAGCTGTTGGCCCGAGGGGGCGAACACGTCC
ACACCCCTTTCCACATCGAGGTCTCCCGGGCATCTTTGGGGGCAATCGAC
GCCGTGGAGAAGGCGGGGGGAACTGTTACCTGCGTGCATTTCAACCGGCT
GGCCCTGCGCGCCTTGTTGAAACCTGAGGCGTTCCGGGTCCCCATGCTGG
GGGAGGATGGCCAAGTGGAGGAGACGTTGCAGCTGCCCAGACGGGCCCGG
CCACCTCCTCGCTTGATGCCCCTTTACCTGGATAGTGACCGGAGGGGGTA
CCTGTCTCCCGAGGTGCAGCGGAGGAACAAGGACCTTTTCAACGGCCAAG
TCATCAGCGAAGAGATACCCAAGCTGGCTTTGGATTAGGCTAAACAATGC
TCTATAAAGAAAAAACATGCTCGGGAGATGTGCTGATG back to topprotein sequence of rna3241 >rna3241-protein ID=rna3241-protein|Name=rna3241|organism=Nannochloropsis gaditana|type=polypeptide|length=256bp
MHVLQVVRIVCGGCCRRSSPSYERGEGSTKFWSPLYEAASVSELSGHYTN
KPFIFIKAVTGVSRPQQDTLEVMGAYASTRLLTPDEAAGLLGPELSQRVE
EGFSRLSVNGNDGGRGDGIDQRTFHRHVLEAFPAMPVVVVRTLFDAIDAT
AGGRREGGRGQGLVAMDDFMCMAAVLLKGSAEQRMRLAFRVYEVMGLRRL
EGGGGRVGGRGGGGDFLFRGQVSSALSGNQGNPMGLGGGGRAAEGRRLPQ
AWWPWS back to topmRNA from alignment at CM002460.1:1096787..1097795+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3241 ID=rna3241|Name=rna3241|organism=Nannochloropsis gaditana|type=mRNA|length=1009bp|location=Sequence derived from alignment at CM002460.1:1096787..1097795+ (Nannochloropsis gaditana)
ATGCATGTTTTACAGGTCGTCCGTATTGTTTGTGGCGGGTGCTGCCGGCG
CAGCTCTCCATCGTatgagaggggagagggcagcaCTAAATTCTGGTCCC
CTCTGTACGAAGCAGCCAGCGTTAGTGAATTGTCAGGGCATTACACGAAT
AAACCCTTCATTTTTATCAAAGCAGTAACCGGGGTATCGCGTCCGCAACA
GGACACACTTGAGGTCATGGGTGCATATGCATCAACTCGCCTCCTCACCC
CTGACGAGGCAGCAGGGTTGCTGGGGCCGGAATTAAGCCagcgcgtggag
gaaggattCAGTCGCTTGAGTGTTAATGGAaatgatggaggaaggggaga
cgggATCGACCAGCGGACCTTTCATCGGCATGTTTTGGaagccttccccg
ccatgCCCGTCGTTGTGGTACGGACTCTATTTGATGCAATAGACGCGACG
GcgggtggaagaagggagggaggaagaggacaaggtcTTGTGGCCATGGA
TGACTTCATGTGCATGGCCGCAGTGTTGTTAAAGGGCAGCGCGGAGCAGC
GTATGAGGCTGGCTTTCCGAGTGTACGAAGTCATGGGACTGCgaaggctg
gagggagggggaggaagggttggagggaggggcggagggggcgattTCCT
GTTCAGGGGCCAGGTCTCTTCGGCGCTTTCAGGCAATCAAGGCAACCCCA
TGGGcctcggtggaggcggaagagcgGCCGAGGGCAGGTGTGTGGACGCG
CGCGACGTGGAGACTTTGTTGCGTGCTGTGTATGGGCCGGGGGTGCCGGA
GGTCGAAGCAGCCGCACGGGTTCTCTTTGGCcatccgtcttcctcccccg
cgaccTCGGCGTCGTCGCAGATCCTggactttcccgccttctccctccgc
ctggcCGGGGCCGGGTGGGCCCagcgggtggtggtggggtgGCTGGTGAC
GGTCCTGGCCCAGGTCTTGACGCAGGCGCCTCCCGCAAGCATGGTGGCCT
TGGAGTTGA back to topCoding sequence (CDS) from alignment at CM002460.1:1096787..1097795+ >rna3241 ID=rna3241|Name=rna3241|organism=Nannochloropsis gaditana|type=CDS|length=1542bp|location=Sequence derived from alignment at CM002460.1:1096787..1097795+ (Nannochloropsis gaditana)
ATGCATGTTTTACAGGTCGTCCGTATTGTTTGTGGCGGGTGCTGCCGGCG
CAGCTCTCCATCGTatgagaggggagagggcagcaCTAAATTCTGGTCCC
CTCTGTACGAAGCAGCCAGCGTTAGTGAATTGTCAGGGCATTACACGAAT
AAACCCTTCATTTTTATCAAAGCAGTAACCGGGGTATCGCGTCCGCAACA
GGACACACTTGAGGTCATGGGTGCATATGCATCAACTCGCCTCCTCACCC
CTGACGAGGCAGCAGGGTTGCTGGGGCCGGAATTAAGCCagcgcgtggag
gaaggattCAGTCGCTTGAGTGTTAATGGAaatgatggaggaaggggaga
cgggATCGACCAGCGGACCTTTCATCGGCATGTTTTGGaagccttccccg
ccatgCCCGTCGTTGTGGTACGGACTCTATTTGATGCAATAGACGCGACG
GcgggtggaagaagggagggaggaagaggacaaggtcTTGTGGCCATGGA
TGACTTCATGTGCATGGCCGCAGTGTTGTTAAAGGGCAGCGCGGAGCAGC
GTATGAGGCTGGCTTTCCGAGTGTACGAAGTCATGGGACTGCgaaggctg
gagggagggggaggaagggttggagggaggggcggagggggcgattTCCT
GTTCAGGGGCCAGGTCTCTTCGGCGCTTTCAGGCAATCAAGGCAACCCCA
TGGGcctcggtggaggcggaagagcgGCCGAGGGCAGGCGCCTCCCGCAA
GCATGGTGGCCTTGGAGTTGAATGCATGTTTTACAGGTCGTCCGTATTGT
TTGTGGCGGGTGCTGCCGGCGCAGCTCTCCATCGTatgagaggggagagg
gcagcaCTAAATTCTGGTCCCCTCTGTACGAAGCAGCCAGCGTTAGTGAA
TTGTCAGGGCATTACACGAATAAACCCTTCATTTTTATCAAAGCAGTAAC
CGGGGTATCGCGTCCGCAACAGGACACACTTGAGGTCATGGGTGCATATG
CATCAACTCGCCTCCTCACCCCTGACGAGGCAGCAGGGTTGCTGGGGCCG
GAATTAAGCCagcgcgtggaggaaggattCAGTCGCTTGAGTGTTAATGG
AaatgatggaggaaggggagacgggATCGACCAGCGGACCTTTCATCGGC
ATGTTTTGGaagccttccccgccatgCCCGTCGTTGTGGTACGGACTCTA
TTTGATGCAATAGACGCGACGGcgggtggaagaagggagggaggaagagg
acaaggtcTTGTGGCCATGGATGACTTCATGTGCATGGCCGCAGTGTTGT
TAAAGGGCAGCGCGGAGCAGCGTATGAGGCTGGCTTTCCGAGTGTACGAA
GTCATGGGACTGCgaaggctggagggagggggaggaagggttggagggag
gggcggagggggcgattTCCTGTTCAGGGGCCAGGTCTCTTCGGCGCTTT
CAGGCAATCAAGGCAACCCCATGGGcctcggtggaggcggaagagcgGCC
GAGGGCAGGCGCCTCCCGCAAGCATGGTGGCCTTGGAGTTGA back to top
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