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Properties
| Property Name | Value |
|---|
| Product | Glycosyl transferase, family 8 |
| Orig transcript id | gnl|cribi|Naga_102117g1.10750.mrna |
| Orig protein id | gnl|cribi|Naga_102117g1.10750 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:1087211..1088351 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3237 ID=rna3237|Name=rna3237|organism=Nannochloropsis gaditana|type=mRNA|length=5364bp
CGGAAATCCGAGGCGATGGAGGATGGTCCTGATTCTCGCATCCCTTCCCG
TCTGCTTTTTAAGACCCTGCGCCACGTACACGCGGGTTTGGCCGTCCGTG
TAGGGTCGAGATTGAAAAATTTCGACAGGTGACATTGCTCTGGTGTCTTT
TATAGTTTTCGTTTGGATGGCAATTATCGCCTTTCATAGACAGCCACGCG
CAAACCGCATAAATACGCAGTTTCTTCCACCGTCTCACACAATTGTTGAG
CTTTTAACAGGCCCAATTTTCATTTTTTTCACCCCTTCATGCAATCCTGA
CAGCAAATATGATCTGATACATTAAAGTGGCAGGAAATATGCGAACCTCT
GGCCAAGTATCACCGTAGACGTGTAAAGGGAAAATGGAAATGCGTCGCGT
GAAAGAACGGAGTAAGAATCTATCCGCAAAATGACCTTCCGTTTGCTGCA
AACCCGTCCGTGAAAATCAGCAACTGCCGGGCTGATAAGGATCATGAATA
CGTCTCCAGAATTAATTCCATGGGAAGCTCGACTCGATGCACTCATGTCG
GGAGGGAAGGCAGATTTGGCATGGCTCCGAAGTACATTCGGTCCGATGCG
GAAAGCGGGATGGAAAGACCGCGAGAAGGGCAAAGATCCTCTAAGCAATT
GTACGTGTGTGTGGGGGAGGTCGCGTCGAACATGCACTATATCGCTCATC
TATGATCATGGTATACCGTTCAGGCATTTTTTATACACCGGAAGGCGAGC
GCAAGCGCGTCTTGGCTTTGCCCATCGAGGAAGGACGCGAGTACTTCAAA
TCCAAAGAGGACTACCTGACTTTTGTGACCAAGCGCATGATCGCCTACTT
CGATGCCAAAGAGAAGCGACCAGGGCGATCTTCTCAAAGTTGCATGACCC
CAGTTCCTGACAGGGCGTCGGACTGTGTCGTGATGGGCCCCGCCCCATTG
GAAAAGGCCAAATTCAAGACTTTTTGGCCTGCCCGTGTGGCTACCGAGCA
AGAGGCGCTGGAATTTCGAAAAATGCACGGTCTGTGGGGAAGGAAGGAGG
AGCAAATGGTGGTGCTCGTGTTTTTGTGCGTTGGTGGGCATCATGTCCTG
ACCTCAGTCAAGCAAGATGCGTGTCGGCGAGTGACGCTCGAGGAGCTCGA
CTACATGGTGGATCTTTGGTTTAACGGCGGAGAAAAGCTGCAGGCAGGTG
TGACGCTAGGTCAGCCCTTGAGGACGACGCAATTGGGGCTCGAATTCGTG
GCAGGCCTCCTGTATGCCCAAGCGTTTGCACGCTTGGGCCGGGAGGATGT
TTCGGTCGAACGTCCCGTTCGCAACGAAGCACGTGTGACGGCATTTACTG
CCAGGCAATTGAACAACCCCTGGGAGGCTTGTTTTGTAGAAGATGCGGCA
CACGAAAAGGTGTATGCCCAAGACTTCCCAGGTCTTCGCGACTGCGACCA
ATGCTTCGCATCCCAGCAAGATTGCACTGCGCCGGAGATTCTGGGTATGG
CCCTGCATTACTTGAAGCATCGCGTCGAGTACGCCCTCCCTCATCCTTTG
CCTGTCCAGCACGGGGCCATGCGGGCGGAGGAGGGGCCGTGTGTAGGAAA
ACGCAAGTTTCAGGAGCATCCGGCCAGCCTGGATACGGATCGTATTGCCG
ACATGGAGAATGCCTACATGTCTTCTCAAGCCGCAGAAACCAAGTACAGG
GACGTCTCGACAGCCTCTGATTCCATCTTTTTGCCATCAGCAGCAGCAAG
CTTGGATCAAGCATGCCAGAAAATGGGCACTTTTTCCTGTTCCCTCCTAT
CCTCGTCCGCGCAAACGCCCTCCACGCATGGCACGAAAGCACGCAAAGGA
AAAGAACGTCGGACCCATCGCAGTGTCGCGGCCCGCCCCCCACCATCACC
CTTGCTCTCGCCGCCGCGTTCTATCCCGTTGCCCTGTGTGGAAGAGCCGC
CAAACTTGGACGCAGCGGTCTCCTCCTTCCGGTGTGCCTGGAGCACGCTG
CGGTCCCAGGCTTCCTCCTTGGCCACCAACGCGCCTGCGTGCTGGACGGA
AGAGCCTGTTTCAGTCAAGGCAGTGGAAAGTGTGGTCCTGCCCCAGTTGC
TAGCACGCTGTGAGGCCAAAGAATTGGACGTGGATCGAGATCTGACCTTC
GCCCATCAGGTGGTGCGTCACGCCGTGGAGGAAATTCGAGGTCTTGGGTT
GAAAGTCAGGAGAGCGAAGCGGAACGAAATGGACAAGATCAAAGCGGACT
TTCGGCGGGCGCTTGTTGACATAGGAACGGAGGCTTATGCCGGATTAGTG
GCTTTTGAGCAAGGCGCAGCGGCCCGCGACGTCATGATTTTGGTGCTAGA
GCAGAAGGAAGAGGATGCCGCACAGGTGCACAGGAAATTCTTTAAAGATA
ACCAAACTAATGATGGAGAGGGACCGACGATCGGTGTGGAGAAAGGCTGT
GTGCATGGTGAGACCAAGGACCATGCCAAGCACCACACGGCGAATCTAAA
AGCGGACCTGATGCAGATGAAAGAGCTATTGTCGAACCTCGTTTCATCCA
CAGGAAAGCTCGTGATGCGTCAGACAGTGGCATCTTACGAGCTCAAGCTC
AGGGAAGCTCTTACTCTGGACGAGCGCACGTCTCATGACCTGCAGCCATT
GCTCGGAAACCAAGACGCACGCGCCACGCCTGAGACGATTGAAGCCTCCA
ATGGTAGCTTGGAGGAGAAAGAGTGGTTGGCAGAACGACTTACTCCTCTG
GTAGAGCGCTTGGAAAATGTGGAAAGCCTTGCCCTCGCCCACGATGCCCA
GCTTGACGATGCCGTCCGGCTTTGCATCGTGCAGTGGGGAGCCTTGCGGT
GTCAACTCCTCAGGCACGGTGTCCTTGGTCGGGGGGGGAAAAAGAAGACC
CTATTGTTGTACGACATACGCTGCGCCAATCACAAGGTGCCCGAGGCCCA
TGTGGAGCAGCCGCAACGATTTTTGCACGCTGCGGCGGCCATGCGGCAGC
TTATGCAAAGTAATCCAGAAGCCTTTGCACTCCAGACAGAGATTACAGCG
GACTATTTCCCCCTCTGGCGCGGACCTCAGGAAGGATACAGGGACGAAAT
TTTGCGTGTGCATACGGCGGCCCATTTGGACGGCATTCGAATCCGTTGCG
AAGCCGCCGGTTCGGATATTACGCGGCTCTCGGCGCCTCCCCGTGTCGCG
GCTGCTACTGTGCGTGTGCAAGCCTGGTTGAACAAACACAAAAACGGCAG
CGTCGGTCCAAATGCTGACGCTTCATCCTCTTCCCGTCCGCTTCTTCGAT
CTACTGCGACCGACTCTTCCTCTTCGGCTCCTTTGCTGGGCGTGGGGCTG
GGCGAAAGTGCCCCTGGCCATCTGTACCATCACCCTTTTTTGATCACACA
GTCCCCTCGAAAGGCTGCTAGCGGCGGTGAGAAAGAGAAGGAAGAAGTGG
ACGGAGACACCTTTGGGAACAAGGAGAGTTTTGTGGCGGCGAGTGTAGGT
TTTGCCGGAACCCTGCAAGCAGTCGACGCGGTGATTCAAGGTCGGGCGGG
TAACGCCTTTGTCGCCTGCCGCCCGCCTGGGCATCATGTAGGTCGGAACG
GCAAGCCTATTTTGGACTGCGTCGCTGATGAGAAGGCTCAGGACGTGGGT
TGGGGTTTCTGTTTCCTGAATTATGTGGCTGGAGCCGCCTTACATGCCGT
GGAACGCTGGGGACTGTCCAGGGTTTCGGTGGTCGACATTGACCTGCATC
ATGGCAATGGGACGGAAGAGATTTTGAGTTTGCACCGGAACACTGCCTTC
CAGTTCATCTCCGTGCATGCTGCAGGCATCTTCCCCTACACGGGCGAAGC
TTCCCGGGCTCGATGGCCGCGAGTTGTGAACCTTCCCTTATCCCCCCCTT
TGACTCCACACAAGTACCGCAAAGTCTGGTGTAAAGTTGACGAAGCCGTG
GACGCCTTCGGGCCGGAATTAATTCTCTTGTCGGCAGGCCATGATGCCCA
TTGGAATGATCCTATAGGTAGCAAAGAATTCGTCGGGGGAGGGAAAAACA
CTGTCGCCCCCATAGGCCGCCTGAGCAGTGACGATTACTTTGACATCGTC
TCTCGGGTGGTGAATCTTGCCAACCGGCACAGTATGGGTCGGCTAGTAGC
GGTGATGGAAGGCGGTTATTGCTGTCGTCCTCCAAATACGCGGTCCGCCA
GAGCTGCCTCGTCTGCGGGCACCAGCCGCTACTTTCAAGACCACGAGGAA
GCAGTGGATGGAGGGGAATATGATGCGATCGACCCGGCAACAGTAGAATC
TGAAACCGTTCGTGACTGTGTTGCAGCCACCTGTCGTGCCTTGGCAGGGA
TAGCGTGTCGAGACGAGCACAGGGTGGAGGAGGCGACCATACGACCGAAA
GACAAGAAGCAGATTGATATGGGGGTTGCTGTGGGGCTCTATGGGATCCC
ATCAGCTAGTTCCTTTAGTGTCTAAAGATAGGTTGCGCAAAGTATGAAGC
AACAATATAATATAGTCTTCAGATGGAGTAGTTTAGGCGAAATCGGTTTA
GGGGAAACAAGTCTCGAAGATGATACCATAGAGATACTCGGAACTAAGGT
ATTTGCCACGTACTTGCTCCTGCTCTGAAACTTTCGTGCCCGTCTTTTCC
TGCTCTCACCCACAAGCGTAGGAGAAACACCAAAGCAGATGCCGGACTGC
TCGATCTCGTGTGCGAGCCCCGGCATCGAGGCATATGGGCCGACACGATA
TGGGCCGACGCCGAAGGTCCGTCCATGCCCACTATCGCTTACTAAGTAGT
ACGGGAACGACGAACATCGGAGGCAACGAAAAGTGCCACGGATCTATGGC
GAGGAAGAGACGTGCTCCTTGCTGCATACTGCGTGAAAGTCATCAAGTCA
ACCACACGCGCTTGTTGGGATTCCTGCAGGGGGCTTATGGGGACAGTAGG
ACAGGTGGTTCCCATGTTGGCAAGGCATATCACCAGAAGAGCGAGTGTTC
GACCTCCCGCCCTCTACCAAATACACACAGACCGCCAGCCGTCATGTTCA
GGGGTATAACCGATGGTAATGTGCATCAACGAATTGTCTCATCCAGCCAA
CAGCAGCGGACTTGGTTCAGGATCATAGGGTTGCTCCTGATATGTGTCTG
TTTTTTGTTCATGCGGAGCGTCACCTGGCAGATTGATCGAGACTCTGGAG
CAAGAGCATTGTCTTCATCCCCGCGATTGTCCTACAACAATTCTTTCAAT
CTTTTCGGAATAAATAAATACGAGCGTAAAACTGTCGCTTACGTAATCTC
GGTGACAGCGGATGGTGCCCACTCAGACGGCGCCGCAGTTCTGGCCCATG
GCATTCGAAAGGCC back to topprotein sequence of rna3237 >rna3237-protein ID=rna3237-protein|Name=rna3237|organism=Nannochloropsis gaditana|type=polypeptide|length=270bp
ATSKYGVDFIAIVHPNVTTSRAALRRSGWKVIERDIPVDITDIQGTFLRE
HIAKSGCCGATELLKLYAWTLTDYHRVVHLDMDSMLLQPMDELFDKEDKT
FMYTCDYGMTNERLKACMVQGGFLLLRPNVTEFERLVDTVKIGDFRQGSG
WGGKGIGWGYGGMTIQGLLPYYFLSLSDPELSLQLDHCKYNTMFDQPQCK
NASLFPSVKSVHFTVCQKPWSCINTHKEACEYFKSKWFELRDELEVLETG
AHAEACKGGQYHPLTYLYDT back to topmRNA from alignment at CM002460.1:1087211..1088351+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3237 ID=rna3237|Name=rna3237|organism=Nannochloropsis gaditana|type=mRNA|length=1141bp|location=Sequence derived from alignment at CM002460.1:1087211..1088351+ (Nannochloropsis gaditana)
GCAACCTCAAAATACGGCGTGGATTTTATCGCTATAGTGCATCCAAACGT
CACTACCTCGCGTGCGGCACTCCGTCGGTCGGGCTGGAAGTAAGTATGGT
ATTTTGATCGGAAGCTCAGGACGCGTTGCACCCAGAATAGAGACATTCTA
CAGAGATGTAAGCTACTAACGATTCTCCTCTTTTGATCCGAATGTAACAG
AGTGATAGAGCGGGACATTCCTGTGGACATCACCGATATCCAGGGCACCT
TCTTGCGGGAACACATAGCGAAAAGCGGCTGCTGTGGGGCAACAGAGCTT
TTGAAGCTGTACGCGTGGACACTGACAGACTATCATCGGGTAGTACACTT
GGATATGGACTCGATGCTGCTGCAGCCCATGGATGAGCTTtttgacaagg
aggacaagaccTTTATGTATACATGTGACTACGGCATGACGAATGAAAGG
TTGAAAGCTTGCATGGTGCAAGGGGGTTTCTTATTGCTCCGTCCCAACGT
GACGGAGTTTGAGCGGCTGGTGGACACTGTTAAGATCGGTGATTTCCGAC
AGGGCTCAgggtggggtgggaagggcaTTGGATGGGGCTATGGCGGCATG
ACTATTCAAGGTTCGTGATGGTTACAAGGATGTGTGCGTACAGGCGcatg
gggatggagagagacGGAAGCTTTGTTTTAACTTGGATAATTCTTTCATT
CCCAGGATTGCTGCCGTACTACTTTCTGAGCCTTTCTGATCCTGAATTGT
CGTTGCAATTAGACCACTGCAAGTACAACACCATGTTTGATCAGCCGCAG
TGCAAAAACGCTAGCCTATTTCCTTCAGTGAAGAGCGTGCATTTCACGGT
CTGTCAAAAGCCTTGGTCATGTATCAATACTCATAAAGAGGCATGCGAAT
ATTTCAAAAGCAAATGGTTCGAGCTGCGCGATGAGGTAAGCAGACGGATC
CTAACGAGGAATCTGGTCAGTGCATGTGACAGTTGCTCCTGTTTCTCTTT
AGCAAAATGAAATCCTTGCGTCATTGTACCGTATCTTCATCATACACACA
ATAAACCAGCTCGAGGTTCTAGAGACGGGTGCGCACGCAGAGGCCTGCAA
GGGCGGTCAATACCACCCCTTGACGTATTTATATGATACAG back to topCoding sequence (CDS) from alignment at CM002460.1:1087211..1088351+ >rna3237 ID=rna3237|Name=rna3237|organism=Nannochloropsis gaditana|type=CDS|length=3244bp|location=Sequence derived from alignment at CM002460.1:1087211..1088351+ (Nannochloropsis gaditana)
GCAACCTCAAAATACGGCGTGGATTTTATCGCTATAGTGCATCCAAACGT
CACTACCTCGCGTGCGGCACTCCGTCGGTCGGGCTGGAAAGTGATAGAGC
GGGACATTCCTGTGGACATCACCGATATCCAGGGCACCTTCTTGCGGGAA
CACATAGCGAAAAGCGGCTGCTGTGGGGCAACAGAGCTTTTGAAGCTGTA
CGCGTGGACACTGACAGACTATCATCGGGTAGTACACTTGGATATGGACT
CGATGCTGCTGCAGCCCATGGATGAGCTTtttgacaaggaggacaagacc
TTTATGTATACATGTGACTACGGCATGACGAATGAAAGGTTGAAAGCTTG
CATGGTGCAAGGGGGTTTCTTATTGCTCCGTCCCAACGTGACGGAGTTTG
AGCGGCTGGTGGACACTGTTAAGATCGGTGATTTCCGACAGGGCTCAggg
tggggtgggaagggcaTTGGATGGGGCTATGGCGGCATGACTATTCAAGG
ATTGCTGCCGTACTACTTTCTGAGCCTTTCTGATCCTGAATTGTCGTTGC
AATTAGACCACTGCAAGTACAACACCATGTTTGATCAGCCGCAGTGCAAA
AACGCTAGCCTATTTCCTTCAGTGAAGAGCGTGCATTTCACGGTCTGTCA
AAAGCCTTGGTCATGTATCAATACTCATAAAGAGGCATGCGAATATTTCA
AAAGCAAATGGTTCGAGCTGCGCGATGAGCTCGAGGTTCTAGAGACGGGT
GCGCACGCAGAGGCCTGCAAGGGCGGTCAATACCACCCCTTGACGTATTT
ATATGATACAGGCAACCTCAAAATACGGCGTGGATTTTATCGCTATAGTG
CATCCAAACGTCACTACCTCGCGTGCGGCACTCCGTCGGTCGGGCTGGAA
AGTGATAGAGCGGGACATTCCTGTGGACATCACCGATATCCAGGGCACCT
TCTTGCGGGAACACATAGCGAAAAGCGGCTGCTGTGGGGCAACAGAGCTT
TTGAAGCTGTACGCGTGGACACTGACAGACTATCATCGGGTAGTACACTT
GGATATGGACTCGATGCTGCTGCAGCCCATGGATGAGCTTtttgacaagg
aggacaagaccTTTATGTATACATGTGACTACGGCATGACGAATGAAAGG
TTGAAAGCTTGCATGGTGCAAGGGGGTTTCTTATTGCTCCGTCCCAACGT
GACGGAGTTTGAGCGGCTGGTGGACACTGTTAAGATCGGTGATTTCCGAC
AGGGCTCAgggtggggtgggaagggcaTTGGATGGGGCTATGGCGGCATG
ACTATTCAAGGATTGCTGCCGTACTACTTTCTGAGCCTTTCTGATCCTGA
ATTGTCGTTGCAATTAGACCACTGCAAGTACAACACCATGTTTGATCAGC
CGCAGTGCAAAAACGCTAGCCTATTTCCTTCAGTGAAGAGCGTGCATTTC
ACGGTCTGTCAAAAGCCTTGGTCATGTATCAATACTCATAAAGAGGCATG
CGAATATTTCAAAAGCAAATGGTTCGAGCTGCGCGATGAGCTCGAGGTTC
TAGAGACGGGTGCGCACGCAGAGGCCTGCAAGGGCGGTCAATACCACCCC
TTGACGTATTTATATGATACAGGCAACCTCAAAATACGGCGTGGATTTTA
TCGCTATAGTGCATCCAAACGTCACTACCTCGCGTGCGGCACTCCGTCGG
TCGGGCTGGAAAGTGATAGAGCGGGACATTCCTGTGGACATCACCGATAT
CCAGGGCACCTTCTTGCGGGAACACATAGCGAAAAGCGGCTGCTGTGGGG
CAACAGAGCTTTTGAAGCTGTACGCGTGGACACTGACAGACTATCATCGG
GTAGTACACTTGGATATGGACTCGATGCTGCTGCAGCCCATGGATGAGCT
TtttgacaaggaggacaagaccTTTATGTATACATGTGACTACGGCATGA
CGAATGAAAGGTTGAAAGCTTGCATGGTGCAAGGGGGTTTCTTATTGCTC
CGTCCCAACGTGACGGAGTTTGAGCGGCTGGTGGACACTGTTAAGATCGG
TGATTTCCGACAGGGCTCAgggtggggtgggaagggcaTTGGATGGGGCT
ATGGCGGCATGACTATTCAAGGATTGCTGCCGTACTACTTTCTGAGCCTT
TCTGATCCTGAATTGTCGTTGCAATTAGACCACTGCAAGTACAACACCAT
GTTTGATCAGCCGCAGTGCAAAAACGCTAGCCTATTTCCTTCAGTGAAGA
GCGTGCATTTCACGGTCTGTCAAAAGCCTTGGTCATGTATCAATACTCAT
AAAGAGGCATGCGAATATTTCAAAAGCAAATGGTTCGAGCTGCGCGATGA
GCTCGAGGTTCTAGAGACGGGTGCGCACGCAGAGGCCTGCAAGGGCGGTC
AATACCACCCCTTGACGTATTTATATGATACAGGCAACCTCAAAATACGG
CGTGGATTTTATCGCTATAGTGCATCCAAACGTCACTACCTCGCGTGCGG
CACTCCGTCGGTCGGGCTGGAAAGTGATAGAGCGGGACATTCCTGTGGAC
ATCACCGATATCCAGGGCACCTTCTTGCGGGAACACATAGCGAAAAGCGG
CTGCTGTGGGGCAACAGAGCTTTTGAAGCTGTACGCGTGGACACTGACAG
ACTATCATCGGGTAGTACACTTGGATATGGACTCGATGCTGCTGCAGCCC
ATGGATGAGCTTtttgacaaggaggacaagaccTTTATGTATACATGTGA
CTACGGCATGACGAATGAAAGGTTGAAAGCTTGCATGGTGCAAGGGGGTT
TCTTATTGCTCCGTCCCAACGTGACGGAGTTTGAGCGGCTGGTGGACACT
GTTAAGATCGGTGATTTCCGACAGGGCTCAgggtggggtgggaagggcaT
TGGATGGGGCTATGGCGGCATGACTATTCAAGGATTGCTGCCGTACTACT
TTCTGAGCCTTTCTGATCCTGAATTGTCGTTGCAATTAGACCACTGCAAG
TACAACACCATGTTTGATCAGCCGCAGTGCAAAAACGCTAGCCTATTTCC
TTCAGTGAAGAGCGTGCATTTCACGGTCTGTCAAAAGCCTTGGTCATGTA
TCAATACTCATAAAGAGGCATGCGAATATTTCAAAAGCAAATGGTTCGAG
CTGCGCGATGAGCTCGAGGTTCTAGAGACGGGTGCGCACGCAGAGGCCTG
CAAGGGCGGTCAATACCACCCCTTGACGTATTTATATGATACAG back to top
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