EWM27444.1, cds3229 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27444.1 vs. NCBI_GenBank
Match: gi|585109698|gb|EWM27444.1| (Glycosyl transferase, family 8, partial [Nannochloropsis gaditana]) HSP 1 Score: 567.77 bits (1462), Expect = 0.000e+0 Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0
Query: 1 ATSKYGVDFIAIVHPNVTTSRAALRRSGWKVIERDIPVDITDIQGTFLREHIAKSGCCGATELLKLYAWTLTDYHRVVHLDMDSMLLQPMDELFDKEDKTFMYTCDYGMTNERLKACMVQGGFLLLRPNVTEFERLVDTVKIGDFRQGSGWGGKGIGWGYGGMTIQGLLPYYFLSLSDPELSLQLDHCKYNTMFDQPQCKNASLFPSVKSVHFTVCQKPWSCINTHKEACEYFKSKWFELRDELEVLETGAHAEACKGGQYHPLTYLYDT 270
ATSKYGVDFIAIVHPNVTTSRAALRRSGWKVIERDIPVDITDIQGTFLREHIAKSGCCGATELLKLYAWTLTDYHRVVHLDMDSMLLQPMDELFDKEDKTFMYTCDYGMTNERLKACMVQGGFLLLRPNVTEFERLVDTVKIGDFRQGSGWGGKGIGWGYGGMTIQGLLPYYFLSLSDPELSLQLDHCKYNTMFDQPQCKNASLFPSVKSVHFTVCQKPWSCINTHKEACEYFKSKWFELRDELEVLETGAHAEACKGGQYHPLTYLYDT
Sbjct: 1 ATSKYGVDFIAIVHPNVTTSRAALRRSGWKVIERDIPVDITDIQGTFLREHIAKSGCCGATELLKLYAWTLTDYHRVVHLDMDSMLLQPMDELFDKEDKTFMYTCDYGMTNERLKACMVQGGFLLLRPNVTEFERLVDTVKIGDFRQGSGWGGKGIGWGYGGMTIQGLLPYYFLSLSDPELSLQLDHCKYNTMFDQPQCKNASLFPSVKSVHFTVCQKPWSCINTHKEACEYFKSKWFELRDELEVLETGAHAEACKGGQYHPLTYLYDT 270
BLAST of EWM27444.1 vs. NCBI_GenBank
Match: gi|551535057|ref|XP_005756354.1| (hypothetical protein EMIHUDRAFT_221729 [Emiliania huxleyi CCMP1516] >gi|485603193|gb|EOD03925.1| hypothetical protein EMIHUDRAFT_221729 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 213.772 bits (543), Expect = 2.814e-64 Identity = 111/273 (40.66%), Postives = 157/273 (57.51%), Query Frame = 0
Query: 5 YGVDFIAIVHPNVTTS-RAALRRSGWKVIERDIPVDITDIQGTFLREHIAKSGCCGATELLKLYAWTLTDYHRVVHLDMDSMLLQ--PMDELFDKEDKTFMYTCDYGMTNERLKACMVQGGFLLLRPNVTEFERLVDTVKIGDFRQGSGWGGKGIGWGYGGMTIQGLLPYYFLSLSDPEL--SLQLDHCKYNTMFDQPQ------------------------------CKNASLFPSVKSVHFTVCQKPWSCINTHKEA-CEYFKSKWFELR 241
Y +A+ HP V+ + RAAL G++V+ER PV I +I+G+FLR+ I +SGCCGATEL+KL+AW+L +Y RV+ LD DS++L+ P+ L YT DYGM L+ +QGGFLL+RP+ + L++ V+ GDFR GSGWGG IG +GG+T+QGLLPYY+ +D ++LD C +N M D P+ C+ AS +++S HFT+C KPW+C K A C ++W LR
Sbjct: 68 YVSSLVALTHPTVSNATRAALALVGFRVLERPTPVAIPEIRGSFLRQRIVRSGCCGATELMKLWAWSLVEYDRVLLLDTDSIVLRPIPLGILLRMAPGDLAYTYDYGMGKRGLRTPPIQGGFLLVRPSPSVLAELLEIVREGDFRPGSGWGGSNIGHFWGGVTVQGLLPYYYTVRADRRRVSGMELDRCVFNNMADNPRGAEYAVALVPLNASASGAARDMRWQYVGPDCR-ASTLDAIRSAHFTICSKPWNCRPNRKHALCLALHARWHSLR 339
BLAST of EWM27444.1 vs. NCBI_GenBank
Match: gi|299470207|emb|CBN79511.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 212.231 bits (539), Expect = 2.145e-63 Identity = 111/273 (40.66%), Postives = 158/273 (57.88%), Query Frame = 0
Query: 2 TSKYGVDFIAIVHPNVTT-SRAALRRSGWKVIERDIPVDITDIQGTFLREHIAKSGCCGATELLKLYAWTLTDYHRVVHLDMDSMLLQPMDELFDKEDKTFMYTCDYGMTNERLKACMVQGGFLLLRPNVTEFERLVDTVKIGDFRQGSGWGGKGIGWGYGGMTIQGLLPYYFLSLSDPE-LSLQLDHCKYNTMFDQPQCKNASLFPSVKSVHFTVCQKPWSCINTHKEA--CEYFKSKWFELRDELEVLETGAHAEACKGG---QYHPLTYL 267
TS++ D +A +H + + LRR G++V+ +P+ + +I+ R IAK GCCG EL+KL+A+TLT+YHRVVHLD D+++LQP+D L D E+ + +YT D M + VQGGFL++RP+ F+ LV VK F GWGG IG +GG+ +QG+LPYY+ + L +D YN M D+P C+ + V+S HFT CQKPW C+ H + C +WFE+R E H EAC G +Y P+T L
Sbjct: 92 TSEFLCDLVAFLHDEIGLGTENLLRRLGFRVMRPGLPLSLDEIEDPVTRGRIAKGGCCGLAELMKLFAYTLTEYHRVVHLDTDTIVLQPLDALLDAEE-SLLYTADINMGSSYTPVMPVQGGFLVVRPDPEVFQDLVQIVKRTSFYPSKGWGGSMIGLFWGGVNVQGILPYYYERRAPAGVLYRSVDRSVYNNMVDRPSCQAVDI-SQVRSAHFTNCQKPWECLYPHPKQPLCSRLAERWFEMRTLAESALELPHKEACPTGFRSEYTPITLL 362
BLAST of EWM27444.1 vs. NCBI_GenBank
Match: gi|676395307|ref|XP_009040931.1| (hypothetical protein AURANDRAFT_67272 [Aureococcus anophagefferens] >gi|323448476|gb|EGB04374.1| hypothetical protein AURANDRAFT_67272 [Aureococcus anophagefferens]) HSP 1 Score: 204.142 bits (518), Expect = 6.887e-59 Identity = 122/308 (39.61%), Postives = 158/308 (51.30%), Query Frame = 0
Query: 6 GVDFIAIVHPNVTTSRAALRRSGWKVIERDIPVDITDIQGTFLREHIAKSGCCGATELLKLYAWTLTDYHRVVHLDMDSMLLQPMDELFDKE----------------DKTF---------------MYTCDYGMTNERLKAC-MVQGGFLLLRPNVTEFERLVDTVKIGDFRQGSGWGGKGIGWGYGGMTIQGLLPYYFLSLSDPELSLQLDHCKYNTMFDQP---------QCKNASL----------------------FPSVKSVHFTVCQKPWSCINTHK-----EACEYFKSKWFELRDELE 245
G+D A+ R+ LRR G++V+E+ +PV++ DI+G FLR I+ +GCCGA ELLKLYAW+LT+YHRVVHLDMDS++LQ DELFD E D+ YT D+ M A VQGGF + RPN+ FE +V V+ GDFR GWGG G YGGMTIQGLLPYYF + P L ++ C YN M P +C++ ++ +VK VHFT+CQKPW C T + C F WF +R+E E
Sbjct: 150 GIDGAAVSE----AGRSKLRRVGFRVLEKPLPVEVEDIEGDFLRSRISSNGCCGAWELLKLYAWSLTEYHRVVHLDMDSLVLQNFDELFDDEPVEGAATLSAAAVAANDRNLKNVDASLPPIAGVHGQYTFDWNMAQRPWGANPPVQGGFFVARPNLDVFEEMVAIVRKGDFR--GGWGGTRAGSFYGGMTIQGLLPYYFRHVR-PRLGREVRGCVYNNMASNPRSAGGFGKGECRDGTVPGAGAYTGDIAKGDCDDCRLTDVAAVKVVHFTICQKPWICHGTSTSCYYCKICNEFHKLWFAIREEFE 450
BLAST of EWM27444.1 vs. NCBI_GenBank
Match: gi|1210518577|dbj|GAX22453.1| (hypothetical protein FisN_14Hh068 [Fistulifera solaris]) HSP 1 Score: 187.963 bits (476), Expect = 3.301e-53 Identity = 103/292 (35.27%), Postives = 152/292 (52.05%), Query Frame = 0
Query: 1 ATSKYGVDFIAIVHPNVTTSRAALRRSGWKVIERDIPVDITDIQGTFLREHIAKSGCCGATELLKLYAWTLTDYHRVVHLDMDSMLLQPMDELFD--------------KEDKTF------MYTCDYGMTNERLKACMVQGGFLLLRPNVTEFERLVDTVKIGDFRQGSGWGGKGIGWGYGGMTIQGLLPYYFLSLSDPELSLQLDHCKYNTMFDQPQ----------------------CKNASLFPSVKSVHFTVCQKPWSCI-----NTHKEACEYFKSKWFELRDELE 245
A+ +YG F+ P T L+ G++++ R + V+++DI+G FLR I +GCCG ELLKL A+TL Y VVHLD+D ++LQ MD LFD + ++ +T DY M ++ VQGGFL+LRP++ ++ D V GDFRQ GWGG +G YG MT QG++PYY+ L + + S++L+ C YN M D P+ C+ S+ + + H+T+CQKPW C+ N C W+++R ELE
Sbjct: 117 ASRRYGAHFVVFYPPEAATCAEPLQALGFELMPRHVFVNVSDIEGDFLRTQIISNGCCGEKELLKLEAYTLVQYPIVVHLDLDVLILQSMDALFDAMLLQQPIPSTILQQPSQSIPNLVNAFFTYDYNMVQPHVQYKPVQGGFLVLRPSLQVYQEYKDIVLKGDFRQNKGWGGL-VGPFYGSMTFQGIVPYYYNVLKEGKQSVELNRCIYNQMADNPRTGKTVNDQVSGKCRTNTEVCEDCRERSI-QDIVTTHYTLCQKPWWCVPHNANNLQHRLCRQLTHVWYQVRSELE 406
BLAST of EWM27444.1 vs. NCBI_GenBank
Match: gi|397634988|gb|EJK71671.1| (hypothetical protein THAOC_06865 [Thalassiosira oceanica]) HSP 1 Score: 188.348 bits (477), Expect = 3.378e-53 Identity = 114/318 (35.85%), Postives = 156/318 (49.06%), Query Frame = 0
Query: 1 ATSKYGVDFIAIVHPNVTTSRAALRRSGWKVIERDIPVDITDIQGTFLREHIAKSGCCGATELLKLYAW----------------------TLTDYHRVVHLDMDSMLLQPMDELF-----DKEDKTFM-------------------------YTCDYGMTNERLKACMVQGGFLLLRPNVTEFERLVDTVKIGDFRQGSGWGGKGIGWGYGGMTIQGLLPYYFLSLSDPELSLQLDHCKYNTMFDQP-------------QCKNASLFP--SVKSVHFTVCQKPWSCIN------THKEACEYFKSKWFELRDELE 245
+ S + + IA VHPN + A G+ V R+ P + DI+ TFLREHI KSGCCG E LKLYA+ TL+DY VVHLD+DS++L+PMDELF D DK +T DY M K VQGGF++++P++ F V+ VK G F QGSGW GKG G +G IQG+ +Y+ P +++L+ C YN M D P +C++ + P S+KSVHFT+C KPW C + K C F +WF +R++L+
Sbjct: 105 SKSLFDYEMIAFVHPNAKSCSAVFSDLGYTVQIRETPFRVEDIKKTFLREHIVKSGCCGEKEYLKLYAYVREQQSSPFRVVSSVSSHLLAQTLSDYPIVVHLDLDSLVLRPMDELFHSMLGDNGDKNAKDQTKDARTKVPVMHDGELPETIDAYFTRDYNMVQPGHKHPGVQGGFIIIKPSMDAFTEYVEIVKEGRFFQGSGWEGKGYGGYFGAQQIQGICSFYY-DYRHPGTAVELNKCFYNAMADSPRQEKNGKCRDGREECQDCRVVPIESIKSVHFTLCAKPWKCPSWGGLSAQTKSICAEFHKEWFRIREDLD 421
BLAST of EWM27444.1 vs. NCBI_GenBank
Match: gi|219125352|ref|XP_002182947.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217405741|gb|EEC45683.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 180.259 bits (456), Expect = 1.599e-50 Identity = 100/296 (33.78%), Postives = 155/296 (52.36%), Query Frame = 0
Query: 1 ATSKYGVDFIAIVHPNVTTSRAALRRSGWKVIERDIPVDITDIQGTFLREHIAKSGCCGATELLKLYAWTLTDYHRVVHLDMDSMLLQPMDELFDK------EDKTF------------------MYTCDYGMTNERLKACMVQGGFLLLRPNVTEFERLVDTVKIGDFRQGSGWGGKGIGWGYGGMTIQGLLPYYFLSLSDPELSLQLDHCKYNTMFDQPQ----------------------CKNASLFPSVKSVHFTVCQKPWSCINTHKEA-----CEYFKSKWFELRDELE 245
+Y AI HP+ + L+ G++++ER++ V++ DI+G FLR I ++GCCG EL+KL A+TLTDY VHLD+D ++L+PMD +FD TF +T DY M + + VQGGFL++RP++ +E V GDFR G GWGGK +G +G MT QG++ YY+ L P +++L+ C YN M D P+ C+ +L + + H+T+CQKPW C++ ++ C +W+++R +LE
Sbjct: 76 GAGRYNYALFAIYHPSAVSCALPLKALGYELLEREVFVNVADIKGDFLRNKIEQNGCCGEKELIKLEAYTLTDYPIAVHLDLDVLMLKPMDVVFDAMLQDGVSQSTFQTHSVMWPDDPLPTSINAFFTLDYNMVGPKKQYKPVQGGFLVMRPDLNVYEEFRAIVLEGDFRDGQGWGGK-VGPFHGSMTFQGIISYYYNVLH-PGQAIELNRCVYNQMCDNPRTGKTVNDVVQGECRTNTETCEDCRERNL-EDIVTTHYTLCQKPWWCLSHENDSLQHRLCRKLVHEWYKVRSDLE 368
BLAST of EWM27444.1 vs. NCBI_GenBank
Match: gi|1072232140|gb|OEU16872.1| (hypothetical protein FRACYDRAFT_269132 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 177.948 bits (450), Expect = 2.208e-50 Identity = 100/295 (33.90%), Postives = 148/295 (50.17%), Query Frame = 0
Query: 2 TSKYGVDFIAIVHPNVTTSRAALRRSGWKVIERDIPVDITDIQGTFLREHIAKSGCCGATELLKLYAWTLTDYHRVVHLDMDSMLLQPMDELFD------------------------KEDKTFMYTCDYGMTNERLKACM-VQGGFLLLRPNVTEFERLVDTVKIGDFRQGSGWGGKGIGWGYGGMTIQGLLPYYFLSLSDPELSLQLDHCKYNTMFDQP-------------------QCKNASLFP--SVKSVHFTVCQKPWSCIN-----THKEACEYFKSKWFELRDELE 245
+Y AI HP+ L G++++ER+ PV + DIQG +L+ I K+GCCG EL+KL A+TLT + +VH+D+D+++L P+D LFD + M+T DY M R K VQGGFL+LRP++ + V+ ++ GDFR+ GWGG+ G YG MT QG++PYY+ L P ++LD C N M D P +C++ P + + HFT+CQKPW C+ + C +W +R +LE
Sbjct: 14 NGRYNYKMYAIYHPDAIKCAKTLESLGYELVERETPVAVKDIQGEYLKSKIHKNGCCGEKELVKLEAYTLTQHPIIVHMDLDTLVLNPLDYLFDWMLADDSSSYDVSDVPIMWKDEPSPKKVNAMFTRDYNMGGGRKKKNRSVQGGFLILRPDLDVYNEFVEIIRKGDFRESGGWGGQ-TGVFYGSMTFQGIVPYYYDFLH-PGEGVELDRCTVNQMADNPRNKRTVNDIVNGDCMTGEDECEDCRSHPLEDILTAHFTLCQKPWICLPEDSDVIQQRLCRKLHHQWHRIRSDLE 306
BLAST of EWM27444.1 vs. NCBI_GenBank
Match: gi|1210530618|dbj|GAX10569.1| (hypothetical protein FisN_14Lh068 [Fistulifera solaris]) HSP 1 Score: 179.104 bits (453), Expect = 8.327e-50 Identity = 102/291 (35.05%), Postives = 146/291 (50.17%), Query Frame = 0
Query: 1 ATSKYGVDFIAIVHPNVTTSRAALRRSGWKVIERDIPVDITDIQGTFLREHIAKSGCCGATELLKLYAWTLTDYHRVVHLDMDSMLLQPMDELFDK--------------------EDKTFMYTCDYGMTNERLKACMVQGGFLLLRPNVTEFERLVDTVKIGDFRQGSGWGGKGIGWGYGGMTIQGLLPYYFLSLSDPELSLQLDHCKYNTMFDQPQ-------------------CKNASLFP--SVKSVHFTVCQKPWSCI----NT-HKEACEYFKSKWFELRDELE 245
A+ Y F+ P L+ G+++I R + V+++DIQG FLR I +GCCG ELLKL A+TL Y VVHLD+D ++LQ MD L++ +T DY M ++ VQGGFL+LRP++ ++ D V GDFRQ GWGG +G YG MT QG++PYY+ L + S++L+ C YN M D P+ C++ P + + H+T+CQKPW C+ NT C W+++R ELE
Sbjct: 124 ASRAYHSHFVVFYPPEAAMCVEPLQSLGFELIPRQVLVNVSDIQGDFLRTQITSNGCCGEKELLKLEAYTLVQYPIVVHLDLDVLILQSMDALYNSMLLQQPVPSTILQSPSQSIPTQVNAFFTYDYNMVQPHVQYKPVQGGFLVLRPSLQVYQEYKDIVLKGDFRQNKGWGGL-VGPFYGSMTFQGIVPYYYNVLKVGKQSVELNRCIYNQMADNPRTGKTVNDQVSGKCRTNTETCEDCRERPIQDIVTTHYTLCQKPWWCVPHNANTLQHRLCRQLTQVWYQVRSELE 413
BLAST of EWM27444.1 vs. NCBI_GenBank
Match: gi|223999859|ref|XP_002289602.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220974810|gb|EED93139.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 170.629 bits (431), Expect = 2.239e-46 Identity = 114/321 (35.51%), Postives = 165/321 (51.40%), Query Frame = 0
Query: 1 ATSKYGVDFIAIVHPNVTTSRAALRRSGWKVIERDIPVDITDIQGTFLREHIAKSGCCGATELLKLYAWTLTDYHRVVHLDMDSMLLQPMDELF---------DKEDKTFM-----------------------YTCDYGMTNERLKACMVQGGFLLLRPNVTEFERLVDTVKIGDFRQGSGWGGKGIGWGYGGMTIQGLLPYYFLSLSDPELSLQLDHCKYNTMFDQPQ------------------CKNASLFP--SVKSVHFTVCQKPWSCIN------THKEACEYFKSKWFELRDELEVLETGAHAEACKGGQYHP 263
+ S + +A VHP + R G++V+ R+ P ++TDI+ FL+EHI KSGCCG E LKLYA++L ++ VVHLD+DS++L+P+D+LF + M +T DY M N K VQGGFL++RPN+ F + V G+F+QG+GWGGKG G +G IQG+ YY+ L P ++L+ C YN M D P+ C++ P +KSVHFT+CQKPW C + + CE F +WF +R++LE + G +A G+Y P
Sbjct: 136 SQSVFDYHLVAFVHPEAESCCHIFRELGYEVMIRETPFNVTDIKMPFLKEHIVKSGCCGEKEYLKLYAYSLLEFPVVVHLDLDSLILKPLDDLFHAMLDDGASSANNSEAMAARSRIPVMFDDPLPQNNPIDAYFTRDYNMVNPGHKHVGVQGGFLIVRPNMDAFRNYIAVVLEGNFKQGNGWGGKGYGGYFGAQQIQGICSYYYDFLH-PGTGVELNKCYYNVMADAPRQSENAKTHAGKCRDGRETCQDCRDVPIDEIKSVHFTLCQKPWKCPSWVGDDEKTTKICEKFHERWFAIREDLERKKKG-NAYKNPEGKYRP 454 The following BLAST results are available for this feature:
BLAST of EWM27444.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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