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Properties
| Property Name | Value |
|---|
| Product | THO complex, subunit THOC1 |
| Orig transcript id | gnl|cribi|Naga_100174g13.7299.mrna |
| Orig protein id | gnl|cribi|Naga_100174g13.7299 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:1002590..1003444 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3209 ID=rna3209|Name=rna3209|organism=Nannochloropsis gaditana|type=mRNA|length=216bp
ATGCGAAAAGTGCGGCAAGCCGTTGCTCGAGAAGAGGTAGGATCAGGAGG
AGGCCGTATAGAGGGCCTGGAAGAAAGCTTCGTCCATGTTTGTGTTCGCA
TGACCAGCAACGCAGAAGTGCGTGGGAGGAAGAAAATCCTTGTGGACACG
TTTTGTTCCAAAGGACAGGATGGAAGACGGCTCACTTACGAAAACTGCAC
GAGCAAAGACGAATGA back to topprotein sequence of rna3209 >rna3209-protein ID=rna3209-protein|Name=rna3209|organism=Nannochloropsis gaditana|type=polypeptide|length=284bp
MEAFLGCKYLTNSRLFRLQLHDPLIRTQVLTQLLIVLNYASAATALAVAS
PPASSSPAPNPSPPKKGANDLVKHARRLIRNTSAQGAVYLGVLDTVLHRE
QAWLSWKRLQRCEPRIEKPPAPPARTVRTMEAVRQALAGAGKPSGVVAQQ
QKAFYGRPLPVPRPVNLAEVEAEVGEAVGRTFENYVRPRMEEAEDPEACI
DEEYHPRHEPVFCWRAMRLGWAADARVLVGMENASLDALCRKMKGEDGEE
DGGGEGKGKEEGRRKRKRKENGEAGAEQEVMHGT back to topmRNA from alignment at CM002460.1:1002590..1003444- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna3209 ID=rna3209|Name=rna3209|organism=Nannochloropsis gaditana|type=mRNA|length=855bp|location=Sequence derived from alignment at CM002460.1:1002590..1003444- (Nannochloropsis gaditana)
ATGGAGGCGTTTTTGGGGTGCAAATACTTGACCAACAGTCGCCTCTTCCG
GCTGCAGCTCCATGATCCCTTGATCCGCACACAGGTCCTAACACAGCTCC
TCATCGTCTTGAACTATGCCTCGGCGGCCACCGCCCTCGCGGTCGCCAGT
CCCCCCGCTTCCTCCTCCCCGGCCCCGAACCCTTCTCCTCCCAAAAAGGG
CGCGAACGATTTGGTCAAGCACGCCCGGCGACTGATCCGGAACACGTCCG
CCCAAGGGGCGGTCTATTTGGGTGTTTTGGACACGGTTTTGCACCGGGAG
CAAGCCTGGTTGTCCTGGAAACGTTTGCAACGGTGCGAACCACGGATTGA
GAAGCCCCCCGCGCCCCCCGCCCGGACGGTGCGGACCATGGAGGCGGTGC
GGCAGGCTCTGGCGGGGGCGGGAAAGCCGTCGGGGGTGGTGGCTCAGCAA
CAGAAAGCGTTTTACGGGCGTCCTTTGCCCGTGCCGCGCCCCGTCAATTT
GGCGGAGGTGGAGGCGGAGGTGGGGGAGGCGGTGGGGCGGACGTTTGAGA
ACTACGTACGGCCCCGGATGGAAGAGGCAGAGGACCCAGAGGCCTGCATC
GACGAGGAGTACCACCCGCGGCACGAGCCTGTGTTTTGCTGGCGGGCGAT
GCGGTTGGGCTGGGCGGCTGATGCTCGGGTATTGGTGGGGATGGAAAACG
CGTCGTTGGACGCCTTGTGCCGGAAGATGAAGGGGGAGGACGGCGAAGAA
GACGGCGGGGGGGAGGGAAAAGGGAAAGAAGAGGGGAGGAGGAAGCGGAA
GAGGAAGGAGAACGGGGAGGCGGGGGCCGAACAGGAAGTGATGCATGGAA
CGTGA back to topCoding sequence (CDS) from alignment at CM002460.1:1002590..1003444- >rna3209 ID=rna3209|Name=rna3209|organism=Nannochloropsis gaditana|type=CDS|length=855bp|location=Sequence derived from alignment at CM002460.1:1002590..1003444- (Nannochloropsis gaditana)
ATGGAGGCGTTTTTGGGGTGCAAATACTTGACCAACAGTCGCCTCTTCCG
GCTGCAGCTCCATGATCCCTTGATCCGCACACAGGTCCTAACACAGCTCC
TCATCGTCTTGAACTATGCCTCGGCGGCCACCGCCCTCGCGGTCGCCAGT
CCCCCCGCTTCCTCCTCCCCGGCCCCGAACCCTTCTCCTCCCAAAAAGGG
CGCGAACGATTTGGTCAAGCACGCCCGGCGACTGATCCGGAACACGTCCG
CCCAAGGGGCGGTCTATTTGGGTGTTTTGGACACGGTTTTGCACCGGGAG
CAAGCCTGGTTGTCCTGGAAACGTTTGCAACGGTGCGAACCACGGATTGA
GAAGCCCCCCGCGCCCCCCGCCCGGACGGTGCGGACCATGGAGGCGGTGC
GGCAGGCTCTGGCGGGGGCGGGAAAGCCGTCGGGGGTGGTGGCTCAGCAA
CAGAAAGCGTTTTACGGGCGTCCTTTGCCCGTGCCGCGCCCCGTCAATTT
GGCGGAGGTGGAGGCGGAGGTGGGGGAGGCGGTGGGGCGGACGTTTGAGA
ACTACGTACGGCCCCGGATGGAAGAGGCAGAGGACCCAGAGGCCTGCATC
GACGAGGAGTACCACCCGCGGCACGAGCCTGTGTTTTGCTGGCGGGCGAT
GCGGTTGGGCTGGGCGGCTGATGCTCGGGTATTGGTGGGGATGGAAAACG
CGTCGTTGGACGCCTTGTGCCGGAAGATGAAGGGGGAGGACGGCGAAGAA
GACGGCGGGGGGGAGGGAAAAGGGAAAGAAGAGGGGAGGAGGAAGCGGAA
GAGGAAGGAGAACGGGGAGGCGGGGGCCGAACAGGAAGTGATGCATGGAA
CGTGA back to top
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