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Properties
| Property Name | Value |
|---|
| Product | Histone methylation DOT1 |
| Orig transcript id | gnl|cribi|Naga_100174g5.7286.mrna |
| Orig protein id | gnl|cribi|Naga_100174g5.7286 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:989782..991117 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3201 ID=rna3201|Name=rna3201|organism=Nannochloropsis gaditana|type=mRNA|length=2004bp
ATGAAAGCCGGGCCAACCCCTCTTCAAACCCTTCGTGTTTTACGAATCCA
TCGCTGTAGAATCTCCAGTCTAAGCATGGGTGAACTAAATAGACGCCACA
TTCATGCCTCCTCCTCCTCCCTCGCCTCGTCCACCTCGTCCTCCCCCCCT
CCCACCCCCACCGGGTTACGACACGCTGTCTCCTCCTCTTCCTTGGCAGG
CTCCGCGGGTGGTCTCTCCTACGAAGACCACTTGTCAGCATCCTCGTACC
GTGCCCGACCTTCCCGATTCCTGAAATTGGTGAACTGGTGGCACATGATC
TCTGTCTACTTCCCTGCCATCCTCTACGCGCTCATTGCCATCCTGGTCGC
CCAGGTATTCATCGACGTGTCAGACCATGGGCGCGAGATCAAGGAATTCG
TGCACATGGTGGAATCGGTCAAGACTGTCGGCCTATCGCTCCTCATGAAA
GTCACACCGCTTTTCATCCTTGGCCTGTGGTGGGCGACGCACCGGCATCG
GCCCATCTACCTGGTCGACTTCGCGACGTACAAGCCCCCGCCCTCATGGA
AAGTCTCTCAAGCAGACGTCTTGGAAATCATGCGTAGGAAAGGCTGTTTT
ACCGAGAAGTCGTTGGAGTTCATGGAGCGGATCTTGCAGAATTCTGGGAC
AGGGCCCAGCACGGCCTGGCCTCCTGGAATTTTGAAGCTGTTGCGGAGGG
AAGGAAACGGAGAGGGGGAGGCGGGAAAGGAGGGAAAAGGAGGAGTGGAA
GAAGATCCGAATGGCGAAGTGGTGGCGGATCAAACGGAGGAAGGGGCGCG
GGAGGAGGCGCAGGCGGTGATTTACGGGGCGGTGGAAGATGTGTTGGCCA
AGGCGGGGGTACGCCCTCGGGACCTCGACATCCTAATCATCAACTGCTCC
CTCTTCTCCCCCACCCCTTCCCTCTGCGCCATGGTCGCCCACCACTTTCA
AATGCGCCAGGACATCCTCTCCTTCAATTTGTCGGGCATGGGGTGTTCGG
CAGGTCTTGTCTCCATCGATCTGGCCAAACGCCTCCTCGAGTCCCGGCCG
CGCTCTCGGGCTCTCGTCATCAGCACCGAGAACCTCACGCAGGCCTTTTA
CCATGGAAACAACCGGGCATTCCTCCTGCAAAACACCTTGTTTCGATGCG
GGGGTGCGGCTGTCTTGCTCTCGAACCGGGTCCAAGATGGCCTCCGGGCT
AAGTTCAAACTCTTGCACGTCGTCCGGACGCAGGGCACGGACAAGCATTC
CTACGACGCCGTCTACTCGACCCAGGATGAGGAAGGGGAGAAGGGCGTGC
GTTTGTCGAAAGAAATCGTTAAGGTGGCGGGTCGATTGATGGAGAAGAAT
CTGACGGCCATAGGGCCCAAGGTCCTGTCTTTGGGCGAGATGGGCAAAGC
GATGGTGACCCTGGTGGCCCGGAAAGCGGCCCATGCGCTGCGACGCGCCT
GTAAAGCCCGGGGGTGGTCGCGGTTGCAACGCGCCGTGCCCGAGGTCAAA
GTCTACACTCCGAATTTCTCGAGATGCGTCGATTTCTACTGCTTGCACGC
GGGGGGCCGGGGCGTCTTGGACGGCATCGAGAAGAATTTGCAGCTCCTCC
CGGAGCATTTGGAGCCTTCCAGGATGACCCTGTACGATTACGGAAACACC
TCCTCGTCGTCCATATGGTATGAATTGGAATACATTTGCGAGAAGATGGA
TTTGCGTCGGGGCCAACGGATCCTACAAGTCGCGTTTGGAAGCGGCTTCA
AGTGCAACAGTGCAGTGTGGGTCTCCACCCCGCCTGGTGTCAGGGACGTG
AAGGTATACCCATTTAGGGAACATAGGGAGACTACTCGGATGGACAGCGC
TTGTACAAGTATGTGGGTGTCTGTTTGTGTCCGTGTAGATGGTGGGTATG
TTTCCCTCTTCCCCGTGTGGGTGCGTCGCCTCCAACAAAATTTCTTTTAC
CTTAGCCATCGACGGTTCGTACCTAGTGTTATTGAGAAATTAGCAGCTGC
CTGA back to topprotein sequence of rna3201 >rna3201-protein ID=rna3201-protein|Name=rna3201|organism=Nannochloropsis gaditana|type=polypeptide|length=329bp
MRNLCCNVAFLMLGLFIGQSGAFLSPLPSQKLLSTSSLSRTRHAHSLVTG
LDVTSTLDILQHTGNTLLAYTDDTKPTLNAEIIGVSSIGVFAGLAGIFAL
LTKNLKNKNFAFTLSEDEQAAVDAVEALYDPKEEDLALTEAGTVGFVRRK
QLAEKAKESYQQGRDDREVRDKTLYYAEIDLAFLAVLLGAANPSGSGVFY
DLGSGVGRAVLGAAKLARWKKAIGVEYLGGLHKEAIKYEGKFKRLRGSPT
QFVNKDFVDVDLSDAEVVFIYATKYSRDIDDVLATAPVGARIISLDRRLN
ARQYKLLKTIEDPRGDLQLVFGYVYEKTA back to topmRNA from alignment at CM002460.1:989782..991117- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna3201 ID=rna3201|Name=rna3201|organism=Nannochloropsis gaditana|type=mRNA|length=1336bp|location=Sequence derived from alignment at CM002460.1:989782..991117- (Nannochloropsis gaditana)
TATTTGCAATCTCAATTGGAATCTGCATGCAAACCTGGGCGTGTTTGGTT
ATGCACGTCATCTGCTCGTCGTGAGCGACGTGCGTGTACCTCTTGTCGTA
CAGGTCGCAAATGGAAGACATTCGTGCCATGACAGTGGTCTCGCCATCAT
GTCCTACCCCGTCATCACCGTCCCACCGCGCATCCGTCCACCCAATAATC
GCTTTCACTCCATCTCCCCAAGCAGGAGTAGACCCGACGAATCATGAGAA
ATCTCTGCTGCAATGTTGCATTTTTAATGCTTGGCTTGTTCATCGGCCAG
AGTGGAGCTTTTTTGAGCCCTCTACCTTCCCAAAAGCTCCTGTCTACGTC
ATCCCTCTCTCGGACTCGTCATGCGCACTCCTTGGTTACGGGGTTGGATG
TGACCTCGACACTGGACATCTTGCAGCACACCGGAAATACACTTTTGGCG
TACACAGACGACACAAAGCCGACTCTGAACGCTGAGATCATCGGTGTCAG
CTCCATTGGTGTCTTTGCTGGTCTTGCGGGCATCTTTGCGTTGCTGACCA
AGAACTTGAAGAACAAAAACTTTGCCTTCACCCTTTCTGAAGACGAGCAA
GCGGCAGTGGATGCAGTGGAAGCTTTGTATGATCCTAAGGAGGAGGATTT
GGCTCTAACTGAGGCTGGCACGGTGGGGTTTGTCAGGAGAAAGCAGCTTG
CCGAGAAGGCGAAGGAATCGTACCAACAGGGGAGGGATGACCGCGAGGTG
CGCGACAAGACGCTTTACTACGCAGAAATCGATTTAGCCTTCTTGGCAGT
CTTGCTCGGAGCAGCGAATCCATCTGGAAGCGGGGTATTCTATGACCTAG
GATCGGGCGTGGGACGGGCAGTCCTGGGAGCCGCCAAGCTCGCACGGTGG
AAGAAAGCCATCGGAGTAGAATACCTTGGAGGTTTACATAAAGAGGCGAT
CAAATACGAAGGGAAGTTCAAGCGATTGAGGGGATCCCCAACTCAATTTG
TCAACAAAGATTTCGTAGACGTCGACTTGTCGGATGCGGAGGTCGTGTTC
ATTTATGCCACTAAATATTCGAGGGACATCGACGACGTTTTGGCCACAGC
GCCAGTAGGTGCTCGCATCATCAGTTTGGATCGACGTCTGAACGCACGAC
AATATAAGTTGCTGAAGACAATTGAGGACCCCAGGGGGGATTTGCAGCTA
GTGTTCGGATACGTGTATGAAAAGACGGCGTAAATTGATCACAGAGTGCA
GGAGATCGGGACGTGTGGGAACCGCAACAAAGTTTTTCTAACACACAAGG
TCAAAGAATTGATTGGTTTTACCAAGACAAACATAA back to topCoding sequence (CDS) from alignment at CM002460.1:989782..991117- >rna3201 ID=rna3201|Name=rna3201|organism=Nannochloropsis gaditana|type=CDS|length=990bp|location=Sequence derived from alignment at CM002460.1:989782..991117- (Nannochloropsis gaditana)
ATGAGAAATCTCTGCTGCAATGTTGCATTTTTAATGCTTGGCTTGTTCAT
CGGCCAGAGTGGAGCTTTTTTGAGCCCTCTACCTTCCCAAAAGCTCCTGT
CTACGTCATCCCTCTCTCGGACTCGTCATGCGCACTCCTTGGTTACGGGG
TTGGATGTGACCTCGACACTGGACATCTTGCAGCACACCGGAAATACACT
TTTGGCGTACACAGACGACACAAAGCCGACTCTGAACGCTGAGATCATCG
GTGTCAGCTCCATTGGTGTCTTTGCTGGTCTTGCGGGCATCTTTGCGTTG
CTGACCAAGAACTTGAAGAACAAAAACTTTGCCTTCACCCTTTCTGAAGA
CGAGCAAGCGGCAGTGGATGCAGTGGAAGCTTTGTATGATCCTAAGGAGG
AGGATTTGGCTCTAACTGAGGCTGGCACGGTGGGGTTTGTCAGGAGAAAG
CAGCTTGCCGAGAAGGCGAAGGAATCGTACCAACAGGGGAGGGATGACCG
CGAGGTGCGCGACAAGACGCTTTACTACGCAGAAATCGATTTAGCCTTCT
TGGCAGTCTTGCTCGGAGCAGCGAATCCATCTGGAAGCGGGGTATTCTAT
GACCTAGGATCGGGCGTGGGACGGGCAGTCCTGGGAGCCGCCAAGCTCGC
ACGGTGGAAGAAAGCCATCGGAGTAGAATACCTTGGAGGTTTACATAAAG
AGGCGATCAAATACGAAGGGAAGTTCAAGCGATTGAGGGGATCCCCAACT
CAATTTGTCAACAAAGATTTCGTAGACGTCGACTTGTCGGATGCGGAGGT
CGTGTTCATTTATGCCACTAAATATTCGAGGGACATCGACGACGTTTTGG
CCACAGCGCCAGTAGGTGCTCGCATCATCAGTTTGGATCGACGTCTGAAC
GCACGACAATATAAGTTGCTGAAGACAATTGAGGACCCCAGGGGGGATTT
GCAGCTAGTGTTCGGATACGTGTATGAAAAGACGGCGTAA back to top
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