EWM27471.1, cds3193 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27471.1 vs. NCBI_GenBank
Match: gi|553183433|ref|XP_005853896.1| (hypothetical protein NGA_2114600 [Nannochloropsis gaditana CCMP526] >gi|422295165|gb|EKU22464.1| hypothetical protein NGA_2114600 [Nannochloropsis gaditana CCMP526] >gi|585109732|gb|EWM27471.1| Histone methylation DOT1 [Nannochloropsis gaditana]) HSP 1 Score: 665.611 bits (1716), Expect = 0.000e+0 Identity = 329/329 (100.00%), Postives = 329/329 (100.00%), Query Frame = 0
Query: 1 MRNLCCNVAFLMLGLFIGQSGAFLSPLPSQKLLSTSSLSRTRHAHSLVTGLDVTSTLDILQHTGNTLLAYTDDTKPTLNAEIIGVSSIGVFAGLAGIFALLTKNLKNKNFAFTLSEDEQAAVDAVEALYDPKEEDLALTEAGTVGFVRRKQLAEKAKESYQQGRDDREVRDKTLYYAEIDLAFLAVLLGAANPSGSGVFYDLGSGVGRAVLGAAKLARWKKAIGVEYLGGLHKEAIKYEGKFKRLRGSPTQFVNKDFVDVDLSDAEVVFIYATKYSRDIDDVLATAPVGARIISLDRRLNARQYKLLKTIEDPRGDLQLVFGYVYEKTA 329
MRNLCCNVAFLMLGLFIGQSGAFLSPLPSQKLLSTSSLSRTRHAHSLVTGLDVTSTLDILQHTGNTLLAYTDDTKPTLNAEIIGVSSIGVFAGLAGIFALLTKNLKNKNFAFTLSEDEQAAVDAVEALYDPKEEDLALTEAGTVGFVRRKQLAEKAKESYQQGRDDREVRDKTLYYAEIDLAFLAVLLGAANPSGSGVFYDLGSGVGRAVLGAAKLARWKKAIGVEYLGGLHKEAIKYEGKFKRLRGSPTQFVNKDFVDVDLSDAEVVFIYATKYSRDIDDVLATAPVGARIISLDRRLNARQYKLLKTIEDPRGDLQLVFGYVYEKTA
Sbjct: 1 MRNLCCNVAFLMLGLFIGQSGAFLSPLPSQKLLSTSSLSRTRHAHSLVTGLDVTSTLDILQHTGNTLLAYTDDTKPTLNAEIIGVSSIGVFAGLAGIFALLTKNLKNKNFAFTLSEDEQAAVDAVEALYDPKEEDLALTEAGTVGFVRRKQLAEKAKESYQQGRDDREVRDKTLYYAEIDLAFLAVLLGAANPSGSGVFYDLGSGVGRAVLGAAKLARWKKAIGVEYLGGLHKEAIKYEGKFKRLRGSPTQFVNKDFVDVDLSDAEVVFIYATKYSRDIDDVLATAPVGARIISLDRRLNARQYKLLKTIEDPRGDLQLVFGYVYEKTA 329
BLAST of EWM27471.1 vs. NCBI_GenBank
Match: gi|873236842|emb|CEL98332.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 176.792 bits (447), Expect = 9.386e-50 Identity = 108/270 (40.00%), Postives = 156/270 (57.78%), Query Frame = 0
Query: 68 LAYTDDTKPTLNAEIIGVSSIGVFAGLAGIFALLTKNLKNKNFAFTLSEDEQAAVDAVEALYDPKEEDLALTEAGTVGFVRRKQLAEKAKESYQQGRDDREVRDKTLYYAEIDLAFLAVLLGAANPSGSGVFYDLGSGVGRAVLGAAKL-ARWKKAIGVEYLGGLHKEAIKYEGKFKRLRGSPT-QFVNKDF-------VDVDLSDAEVVFIYATKYS-RDIDDVLATAPVGARIISLDRRLNARQYKLLKTIEDPRGDLQLVFGYVYEK 327
+ TD+ + + A I S++ V G A F KN F LS+ E AAV V +YD EED +TE G++G RR+ A++ E + +G+D REVR KT+ Y+E+DL FLAVLL AA P F DLGSG+GRAVLGAA L ++K G+EYL G A Y +F R SP + + DF D + A+V+F Y+ ++S +++ + A GARI+++DR+L + ++L+KT+EDP GDL GYV+ +
Sbjct: 27 ITVTDEEQFQIRAIGIAFSAVTVGGGTAAYFL----RPKNTEMKFVLSDSEAAAVSLVNGIYDASEEDKRMTERGSIGRTRRQLEADRIAEEFAEGKDPREVRGKTITYSEVDLNFLAVLLRAAEPKQGETFVDLGSGLGRAVLGAAALYPSFRKCTGIEYLQGRTDLAKTYVSRF---RSSPAIELMTDDFALPTSAKTDQAIQQADVLFAYSPRFSGKELLSTVEKAKSGARILTVDRKLASDGFELIKTLEDPSGDLNRYRGYVFRR 289
BLAST of EWM27471.1 vs. NCBI_GenBank
Match: gi|1028418383|gb|OAI48476.1| (hypothetical protein AYO45_04955 [Gammaproteobacteria bacterium SCGC AG-212-F23]) HSP 1 Score: 90.8929 bits (224), Expect = 4.747e-18 Identity = 58/170 (34.12%), Postives = 90/170 (52.94%), Query Frame = 0
Query: 164 RDDREVRDKTLYYAEID-LAFLAVLLGAANPSGSGVFYDLGSGVGRAVLGAAKLARWKKAIGVEYLGGLH------KEAIKYEGKFKRLRGSPTQFVNKDFVDVDLSDAEVVFIYATKYSRDIDDV----LATAPVGARIISLDRRLNARQYKLLKTIEDPRGDLQLVFG 322
R+ + D + Y EI L F+ VL A P+ VFYDLG+G G+AV+ AA W+K G+E+L GL K + + + + +FV DF+ +D SDA+V++++AT +S D+ L T G R I++ +RL ++LL E P LQ+ +G
Sbjct: 33 RERLKTEDSSYTYGEIQPLPFMEVLGIAYRPTDK-VFYDLGAGAGKAVIAAALFFDWQKCYGIEFLPGLSACSQQVKNKLLTQSAVSAAKKASVEFVQGDFLQIDFSDADVIYLHATTFSADLWQQLIVKLTTLKPGTRFITITKRLPETHFQLLH--EQP---LQMTWG 196
BLAST of EWM27471.1 vs. NCBI_GenBank
Match: gi|762036722|ref|WP_043872660.1| (hypothetical protein [Legionella massiliensis] >gi|683289422|emb|CEE11783.1| Histone methylation protein DOT1 [Legionella massiliensis] >gi|685071792|emb|CDZ76045.1| Histone methylation protein DOT1 [Legionella massiliensis]) HSP 1 Score: 89.3521 bits (220), Expect = 3.391e-17 Identity = 55/152 (36.18%), Postives = 77/152 (50.66%), Query Frame = 0
Query: 163 GRDDREVRDKTLY-YAEIDLAFLAVLLGAANPSGSGVFYDLGSGVGRAVLGAAKLARWKKAIGVEYLGGLHKEAIKYEGKFK-----RLRGSPTQFVNKDFVDVDLSDAEVVFIYATKYSRD----IDDVLATAPVGARIISLDRRLNARQY 304
R +R V D Y Y EI LL P+ S VFYDLGSG G+AVL + + KK+ G+E GLH A + + + GS +F N DF+ V+L+DA +VFI AT + + I L GA +IS + L ++Q+
Sbjct: 57 SRQERTVSDSPEYVYGEIIFEPFIALLSLCQPNPSTVFYDLGSGTGKAVLACSMVFNVKKSCGIELFPGLHNAATSQQQRLMLKTEYQENGSCIEFKNNDFLQVELTDASLVFINATAFLGEVWLAISKHLEQLKPGALVISTSKPLRSKQF 208
BLAST of EWM27471.1 vs. NCBI_GenBank
Match: gi|1175176992|ref|WP_081724908.1| (hypothetical protein [Legionella oakridgensis] >gi|570703586|gb|ETO94469.1| histone methylation protein DOT1 [Legionella oakridgensis RV-2-2007] >gi|962254040|gb|KTD38219.1| histone methylation protein DOT1 [Legionella oakridgensis]) HSP 1 Score: 86.6557 bits (213), Expect = 1.940e-16 Identity = 59/206 (28.64%), Postives = 97/206 (47.09%), Query Frame = 0
Query: 144 VGFVRRKQLAEKAKESYQQ----------GRDDREVRDKTLY-YAEIDLAFLAVLLGAANPSGSGVFYDLGSGVGRAVLGAAKLARWKKAIGVEYLGGLHKEAIKYEGKFKRLRGSPT-----QFVNKDFVDVDLSDAEVVFIYATKYSRDIDDVLAT----APVGARIISLDRRLNARQYKLLK--TIEDPRGDLQLVFGYVYEK 327
+ R+K ++ YQQ R R +D Y Y EID LL NP+ + VFYDLGSG+G AVL + KK+ G+E LH+ A+K + +++ T F++ DF+ + DA ++FI +T + D L P G II+ ++L ++ + +++ T++ G LV Y+ E+
Sbjct: 3 INIWRKKLHIKQHLNIYQQLFADINGFKLSRKARASQDAMEYLYGEIDFVSFIALLSCTNPTKNTVFYDLGSGIGTAVLACTMVFDVKKSCGIELFSSLHQAALKQKEALEQIPEYSTAANKIHFIHGDFLKTNFYDATLIFINSTAFIGDTWSALCQRLNKMPAGTIIITTSKKLPSQDFHVIRATTVKMSWG---LVTAYIQER 205
BLAST of EWM27471.1 vs. NCBI_GenBank
Match: gi|1175178754|ref|WP_081726667.1| (hypothetical protein [Legionella oakridgensis] >gi|570283517|gb|AHE65704.1| histone methylation protein [Legionella oakridgensis ATCC 33761 = DSM 21215]) HSP 1 Score: 85.5001 bits (210), Expect = 6.767e-16 Identity = 58/206 (28.16%), Postives = 97/206 (47.09%), Query Frame = 0
Query: 144 VGFVRRKQLAEKAKESYQQ----------GRDDREVRDKTLY-YAEIDLAFLAVLLGAANPSGSGVFYDLGSGVGRAVLGAAKLARWKKAIGVEYLGGLHKEAIKYEGKFKRLRGSPT-----QFVNKDFVDVDLSDAEVVFIYATKYSRDIDDVLAT----APVGARIISLDRRLNARQYKLLK--TIEDPRGDLQLVFGYVYEK 327
+ R+K ++ YQQ R R +D Y Y EID LL NP+ + VFYDLGSG+G AVL + +K+ G+E LH+ A+K + +++ T F++ DF+ + DA ++FI +T + D L P G II+ ++L ++ + +++ T++ G LV Y+ E+
Sbjct: 3 INIWRKKLHIKQHLNIYQQLFADINGFKLSRKARASQDAMEYLYGEIDFVSFIALLSCTNPTKNTVFYDLGSGIGTAVLACTMVFDVEKSCGIELFSSLHQAALKQKEALEQIPEYSTAANKIHFIHGDFLKTNFYDATLIFINSTAFIGDTWSALCQRLNKMPAGTIIITTSKKLPSQDFHVIRATTVKMSWG---LVTAYIQER 205
BLAST of EWM27471.1 vs. NCBI_GenBank
Match: gi|1084011597|gb|OGK19070.1| (hypothetical protein A2779_01740 [Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_01_FULL_40_98] >gi|1084021674|gb|OGK28534.1| hypothetical protein A3C31_01060 [Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_02_FULL_40_53] >gi|1084023664|gb|OGK30404.1| hypothetical protein A2W49_00795 [Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_12_41_18] >gi|1084030199|gb|OGK36565.1| hypothetical protein A3E69_03500 [Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_12_FULL_40_130] >gi|1084056592|gb|OGK61577.1| hypothetical protein A3G67_01265 [Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_12_FULL_40_12]) HSP 1 Score: 84.3445 bits (207), Expect = 9.054e-16 Identity = 53/163 (32.52%), Postives = 81/163 (49.69%), Query Frame = 0
Query: 163 GRDDREVRDKTLYYAEIDLAFLAVLLGAANPSGSGVFYDLGSGVGRAVLGAAKLARWKKAIGVEYLGGLHKEAIKYEGKFKR-------LRGSP-TQFVNKDFVDVDLSDAEVVFIYATKYS----RDIDDVLATAPVGARIISLDRRLNARQYKLLKTIEDP 313
R + DK L Y EI +L NP VFYDLGSG G+AVL A+ + K +GVE L L+ + + ++++ SP +F DF+D D SDA+V+F +AT + R++ GAR+I + +++++ Y L T E P
Sbjct: 26 ARKKLQFHDKGLTYGEIVPESFYKILSQVNPQKDEVFYDLGSGTGKAVLAASLFFPFSKTVGVELLDDLYDASQQVLQRYQKEIIPRLNTSNSPEIKFFQADFLDFDFSDADVIFAHATCFHDGQLRELLHKFEKLKKGARLIIVSKKVDSHSYALTNTSEHP 188
BLAST of EWM27471.1 vs. NCBI_GenBank
Match: gi|762038908|ref|WP_043874844.1| (hypothetical protein [Legionella massiliensis] >gi|683287612|emb|CEE14074.1| Histone methylation protein DOT1 [Legionella massiliensis] >gi|685070205|emb|CDZ78336.1| Histone methylation protein DOT1 [Legionella massiliensis]) HSP 1 Score: 85.8853 bits (211), Expect = 1.196e-15 Identity = 56/162 (34.57%), Postives = 83/162 (51.23%), Query Frame = 0
Query: 156 AKESYQQGRDDREVRDKTLYYAEIDLAFLAVLLGAANPSGSGVFYDLGSGVGRAVLGAAKLARWKKAIGVEYLGGLHKEAIKYEGKFKRLRGSP--------TQFVNKDFVDVDLSDAEVVFIYATKYS----RDIDDVLATAPVGARIISLDRRLNARQYK 305
AK S + R +++K Y EID +L +PS VFYDLGSG GRAVL A +KAIG+E L L++++ K +FK+ TQF+N F+ D SDA++V++ AT S D+ +A G+RII + + Q++
Sbjct: 86 AKSSSIRYRFLHLIQNKEFIYGEIDFLSFYTILERTSPSTKDVFYDLGSGSGRAVLSAIVFFNVRKAIGIELLPPLYEQSKKTIQRFKQDNAEKEYLPQIERTQFINDSFLHYDFSDADIVYVAATCLSDTSWNDLISKMARLKPGSRIIVTTKTIEHEQFE 247
BLAST of EWM27471.1 vs. NCBI_GenBank
Match: gi|1084045070|gb|OGK50722.1| (hypothetical protein A3B50_04450 [Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_01_FULL_40_42] >gi|1084054581|gb|OGK59657.1| hypothetical protein A3H84_00185 [Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_02_FULL_40_13]) HSP 1 Score: 83.5741 bits (205), Expect = 1.835e-15 Identity = 53/163 (32.52%), Postives = 80/163 (49.08%), Query Frame = 0
Query: 163 GRDDREVRDKTLYYAEIDLAFLAVLLGAANPSGSGVFYDLGSGVGRAVLGAAKLARWKKAIGVEYLGGLHKEAIKYEGKFKR-------LRGSP-TQFVNKDFVDVDLSDAEVVFIYATKYS----RDIDDVLATAPVGARIISLDRRLNARQYKLLKTIEDP 313
R + DK L Y EI +L NP VFYDLGSG G+AVL A+ + K +GVE L L+ + + ++++ SP +F DF+D D SDA+V+F +AT + R++ GAR+I + + +++ Y L T E P
Sbjct: 26 ARKKLQFHDKGLTYGEIVPESFYKILSQVNPQKDEVFYDLGSGTGKAVLAASLFFPFSKTVGVELLDDLYDASQQVLQRYQKEIIPRLNTSNSPEIKFFQADFLDFDFSDADVIFAHATCFHDGQLRELLHKFEKLKKGARLIIVSKEVDSHSYALTNTSEHP 188
BLAST of EWM27471.1 vs. NCBI_GenBank
Match: gi|53752743|emb|CAH14178.1| (hypothetical protein lpp3025 [Legionella pneumophila str. Paris]) HSP 1 Score: 81.2629 bits (199), Expect = 8.391e-15 Identity = 53/174 (30.46%), Postives = 88/174 (50.57%), Query Frame = 0
Query: 161 QQGRDDREVRDKTLYYAEIDLAFLAVLLGAANPSGSGVFYDLGSGVGRAVLGAAKLARWKKAIGVEYLGGLHKEAIKYEGKFKRLRG-----SPTQFVNKDFVDVDLSDAEVVFIYATKY----SRDIDDVLATAPVGARIISLDRRLNARQYKLLKTIEDPRGDLQLVFGYVY 325
QQ R +R+ + Y EI+ LL AN + VFYDLGSG G+AV+ A + K+IGVE LH+ A + K + G F+ DF+ VDLS+A ++FI ++ ++ L + P + +I+ + L++ ++KL+ R +Q+ +G V+
Sbjct: 4 QQARKNRDAIEYV--YGEIEFLPFTALLSMANIDHNTVFYDLGSGTGKAVVACAMVYPVHKSIGVELFPNLHQCACERLQKLAAMEGYTESSKKISFILGDFLTVDLSEATLIFINSSTLFGATWEALNTRLNSLPQLSTVITTSKTLSSSRFKLVT-----RAKIQMSWGVVF 170 The following BLAST results are available for this feature:
BLAST of EWM27471.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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