EWM27471.1, cds3193 (CDS) Nannochloropsis gaditana

Overview
NameEWM27471.1
Unique Namecds3193
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:989885..990874 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27471.1
ProductHistone methylation DOT1
Orig transcript idgnl|cribi|Naga_100174g5.7286.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:989885..990874 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0018024histone-lysine N-methyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0016043cellular component organization
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR013110DOT1_dom_Pfam
IPR029063SAM-dependent_MTases
Homology
BLAST of EWM27471.1 vs. NCBI_GenBank
Match: gi|553183433|ref|XP_005853896.1| (hypothetical protein NGA_2114600 [Nannochloropsis gaditana CCMP526] >gi|422295165|gb|EKU22464.1| hypothetical protein NGA_2114600 [Nannochloropsis gaditana CCMP526] >gi|585109732|gb|EWM27471.1| Histone methylation DOT1 [Nannochloropsis gaditana])

HSP 1 Score: 665.611 bits (1716), Expect = 0.000e+0
Identity = 329/329 (100.00%), Postives = 329/329 (100.00%), Query Frame = 0
Query:    1 MRNLCCNVAFLMLGLFIGQSGAFLSPLPSQKLLSTSSLSRTRHAHSLVTGLDVTSTLDILQHTGNTLLAYTDDTKPTLNAEIIGVSSIGVFAGLAGIFALLTKNLKNKNFAFTLSEDEQAAVDAVEALYDPKEEDLALTEAGTVGFVRRKQLAEKAKESYQQGRDDREVRDKTLYYAEIDLAFLAVLLGAANPSGSGVFYDLGSGVGRAVLGAAKLARWKKAIGVEYLGGLHKEAIKYEGKFKRLRGSPTQFVNKDFVDVDLSDAEVVFIYATKYSRDIDDVLATAPVGARIISLDRRLNARQYKLLKTIEDPRGDLQLVFGYVYEKTA 329
            MRNLCCNVAFLMLGLFIGQSGAFLSPLPSQKLLSTSSLSRTRHAHSLVTGLDVTSTLDILQHTGNTLLAYTDDTKPTLNAEIIGVSSIGVFAGLAGIFALLTKNLKNKNFAFTLSEDEQAAVDAVEALYDPKEEDLALTEAGTVGFVRRKQLAEKAKESYQQGRDDREVRDKTLYYAEIDLAFLAVLLGAANPSGSGVFYDLGSGVGRAVLGAAKLARWKKAIGVEYLGGLHKEAIKYEGKFKRLRGSPTQFVNKDFVDVDLSDAEVVFIYATKYSRDIDDVLATAPVGARIISLDRRLNARQYKLLKTIEDPRGDLQLVFGYVYEKTA
Sbjct:    1 MRNLCCNVAFLMLGLFIGQSGAFLSPLPSQKLLSTSSLSRTRHAHSLVTGLDVTSTLDILQHTGNTLLAYTDDTKPTLNAEIIGVSSIGVFAGLAGIFALLTKNLKNKNFAFTLSEDEQAAVDAVEALYDPKEEDLALTEAGTVGFVRRKQLAEKAKESYQQGRDDREVRDKTLYYAEIDLAFLAVLLGAANPSGSGVFYDLGSGVGRAVLGAAKLARWKKAIGVEYLGGLHKEAIKYEGKFKRLRGSPTQFVNKDFVDVDLSDAEVVFIYATKYSRDIDDVLATAPVGARIISLDRRLNARQYKLLKTIEDPRGDLQLVFGYVYEKTA 329          
BLAST of EWM27471.1 vs. NCBI_GenBank
Match: gi|873236842|emb|CEL98332.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 176.792 bits (447), Expect = 9.386e-50
Identity = 108/270 (40.00%), Postives = 156/270 (57.78%), Query Frame = 0
Query:   68 LAYTDDTKPTLNAEIIGVSSIGVFAGLAGIFALLTKNLKNKNFAFTLSEDEQAAVDAVEALYDPKEEDLALTEAGTVGFVRRKQLAEKAKESYQQGRDDREVRDKTLYYAEIDLAFLAVLLGAANPSGSGVFYDLGSGVGRAVLGAAKL-ARWKKAIGVEYLGGLHKEAIKYEGKFKRLRGSPT-QFVNKDF-------VDVDLSDAEVVFIYATKYS-RDIDDVLATAPVGARIISLDRRLNARQYKLLKTIEDPRGDLQLVFGYVYEK 327
            +  TD+ +  + A  I  S++ V  G A  F       KN    F LS+ E AAV  V  +YD  EED  +TE G++G  RR+  A++  E + +G+D REVR KT+ Y+E+DL FLAVLL AA P     F DLGSG+GRAVLGAA L   ++K  G+EYL G    A  Y  +F   R SP  + +  DF        D  +  A+V+F Y+ ++S +++   +  A  GARI+++DR+L +  ++L+KT+EDP GDL    GYV+ +
Sbjct:   27 ITVTDEEQFQIRAIGIAFSAVTVGGGTAAYFL----RPKNTEMKFVLSDSEAAAVSLVNGIYDASEEDKRMTERGSIGRTRRQLEADRIAEEFAEGKDPREVRGKTITYSEVDLNFLAVLLRAAEPKQGETFVDLGSGLGRAVLGAAALYPSFRKCTGIEYLQGRTDLAKTYVSRF---RSSPAIELMTDDFALPTSAKTDQAIQQADVLFAYSPRFSGKELLSTVEKAKSGARILTVDRKLASDGFELIKTLEDPSGDLNRYRGYVFRR 289          
BLAST of EWM27471.1 vs. NCBI_GenBank
Match: gi|1028418383|gb|OAI48476.1| (hypothetical protein AYO45_04955 [Gammaproteobacteria bacterium SCGC AG-212-F23])

HSP 1 Score: 90.8929 bits (224), Expect = 4.747e-18
Identity = 58/170 (34.12%), Postives = 90/170 (52.94%), Query Frame = 0
Query:  164 RDDREVRDKTLYYAEID-LAFLAVLLGAANPSGSGVFYDLGSGVGRAVLGAAKLARWKKAIGVEYLGGLH------KEAIKYEGKFKRLRGSPTQFVNKDFVDVDLSDAEVVFIYATKYSRDIDDV----LATAPVGARIISLDRRLNARQYKLLKTIEDPRGDLQLVFG 322
            R+  +  D +  Y EI  L F+ VL  A  P+   VFYDLG+G G+AV+ AA    W+K  G+E+L GL       K  +  +      + +  +FV  DF+ +D SDA+V++++AT +S D+       L T   G R I++ +RL    ++LL   E P   LQ+ +G
Sbjct:   33 RERLKTEDSSYTYGEIQPLPFMEVLGIAYRPTDK-VFYDLGAGAGKAVIAAALFFDWQKCYGIEFLPGLSACSQQVKNKLLTQSAVSAAKKASVEFVQGDFLQIDFSDADVIYLHATTFSADLWQQLIVKLTTLKPGTRFITITKRLPETHFQLLH--EQP---LQMTWG 196          
BLAST of EWM27471.1 vs. NCBI_GenBank
Match: gi|762036722|ref|WP_043872660.1| (hypothetical protein [Legionella massiliensis] >gi|683289422|emb|CEE11783.1| Histone methylation protein DOT1 [Legionella massiliensis] >gi|685071792|emb|CDZ76045.1| Histone methylation protein DOT1 [Legionella massiliensis])

HSP 1 Score: 89.3521 bits (220), Expect = 3.391e-17
Identity = 55/152 (36.18%), Postives = 77/152 (50.66%), Query Frame = 0
Query:  163 GRDDREVRDKTLY-YAEIDLAFLAVLLGAANPSGSGVFYDLGSGVGRAVLGAAKLARWKKAIGVEYLGGLHKEAIKYEGKFK-----RLRGSPTQFVNKDFVDVDLSDAEVVFIYATKYSRD----IDDVLATAPVGARIISLDRRLNARQY 304
             R +R V D   Y Y EI       LL    P+ S VFYDLGSG G+AVL  + +   KK+ G+E   GLH  A   + +       +  GS  +F N DF+ V+L+DA +VFI AT +  +    I   L     GA +IS  + L ++Q+
Sbjct:   57 SRQERTVSDSPEYVYGEIIFEPFIALLSLCQPNPSTVFYDLGSGTGKAVLACSMVFNVKKSCGIELFPGLHNAATSQQQRLMLKTEYQENGSCIEFKNNDFLQVELTDASLVFINATAFLGEVWLAISKHLEQLKPGALVISTSKPLRSKQF 208          
BLAST of EWM27471.1 vs. NCBI_GenBank
Match: gi|1175176992|ref|WP_081724908.1| (hypothetical protein [Legionella oakridgensis] >gi|570703586|gb|ETO94469.1| histone methylation protein DOT1 [Legionella oakridgensis RV-2-2007] >gi|962254040|gb|KTD38219.1| histone methylation protein DOT1 [Legionella oakridgensis])

HSP 1 Score: 86.6557 bits (213), Expect = 1.940e-16
Identity = 59/206 (28.64%), Postives = 97/206 (47.09%), Query Frame = 0
Query:  144 VGFVRRKQLAEKAKESYQQ----------GRDDREVRDKTLY-YAEIDLAFLAVLLGAANPSGSGVFYDLGSGVGRAVLGAAKLARWKKAIGVEYLGGLHKEAIKYEGKFKRLRGSPT-----QFVNKDFVDVDLSDAEVVFIYATKYSRDIDDVLAT----APVGARIISLDRRLNARQYKLLK--TIEDPRGDLQLVFGYVYEK 327
            +   R+K   ++    YQQ           R  R  +D   Y Y EID      LL   NP+ + VFYDLGSG+G AVL    +   KK+ G+E    LH+ A+K +   +++    T      F++ DF+  +  DA ++FI +T +  D    L       P G  II+  ++L ++ + +++  T++   G   LV  Y+ E+
Sbjct:    3 INIWRKKLHIKQHLNIYQQLFADINGFKLSRKARASQDAMEYLYGEIDFVSFIALLSCTNPTKNTVFYDLGSGIGTAVLACTMVFDVKKSCGIELFSSLHQAALKQKEALEQIPEYSTAANKIHFIHGDFLKTNFYDATLIFINSTAFIGDTWSALCQRLNKMPAGTIIITTSKKLPSQDFHVIRATTVKMSWG---LVTAYIQER 205          
BLAST of EWM27471.1 vs. NCBI_GenBank
Match: gi|1175178754|ref|WP_081726667.1| (hypothetical protein [Legionella oakridgensis] >gi|570283517|gb|AHE65704.1| histone methylation protein [Legionella oakridgensis ATCC 33761 = DSM 21215])

HSP 1 Score: 85.5001 bits (210), Expect = 6.767e-16
Identity = 58/206 (28.16%), Postives = 97/206 (47.09%), Query Frame = 0
Query:  144 VGFVRRKQLAEKAKESYQQ----------GRDDREVRDKTLY-YAEIDLAFLAVLLGAANPSGSGVFYDLGSGVGRAVLGAAKLARWKKAIGVEYLGGLHKEAIKYEGKFKRLRGSPT-----QFVNKDFVDVDLSDAEVVFIYATKYSRDIDDVLAT----APVGARIISLDRRLNARQYKLLK--TIEDPRGDLQLVFGYVYEK 327
            +   R+K   ++    YQQ           R  R  +D   Y Y EID      LL   NP+ + VFYDLGSG+G AVL    +   +K+ G+E    LH+ A+K +   +++    T      F++ DF+  +  DA ++FI +T +  D    L       P G  II+  ++L ++ + +++  T++   G   LV  Y+ E+
Sbjct:    3 INIWRKKLHIKQHLNIYQQLFADINGFKLSRKARASQDAMEYLYGEIDFVSFIALLSCTNPTKNTVFYDLGSGIGTAVLACTMVFDVEKSCGIELFSSLHQAALKQKEALEQIPEYSTAANKIHFIHGDFLKTNFYDATLIFINSTAFIGDTWSALCQRLNKMPAGTIIITTSKKLPSQDFHVIRATTVKMSWG---LVTAYIQER 205          
BLAST of EWM27471.1 vs. NCBI_GenBank
Match: gi|1084011597|gb|OGK19070.1| (hypothetical protein A2779_01740 [Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_01_FULL_40_98] >gi|1084021674|gb|OGK28534.1| hypothetical protein A3C31_01060 [Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_02_FULL_40_53] >gi|1084023664|gb|OGK30404.1| hypothetical protein A2W49_00795 [Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_12_41_18] >gi|1084030199|gb|OGK36565.1| hypothetical protein A3E69_03500 [Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_12_FULL_40_130] >gi|1084056592|gb|OGK61577.1| hypothetical protein A3G67_01265 [Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_12_FULL_40_12])

HSP 1 Score: 84.3445 bits (207), Expect = 9.054e-16
Identity = 53/163 (32.52%), Postives = 81/163 (49.69%), Query Frame = 0
Query:  163 GRDDREVRDKTLYYAEIDLAFLAVLLGAANPSGSGVFYDLGSGVGRAVLGAAKLARWKKAIGVEYLGGLHKEAIKYEGKFKR-------LRGSP-TQFVNKDFVDVDLSDAEVVFIYATKYS----RDIDDVLATAPVGARIISLDRRLNARQYKLLKTIEDP 313
             R   +  DK L Y EI       +L   NP    VFYDLGSG G+AVL A+    + K +GVE L  L+  + +   ++++          SP  +F   DF+D D SDA+V+F +AT +     R++         GAR+I + +++++  Y L  T E P
Sbjct:   26 ARKKLQFHDKGLTYGEIVPESFYKILSQVNPQKDEVFYDLGSGTGKAVLAASLFFPFSKTVGVELLDDLYDASQQVLQRYQKEIIPRLNTSNSPEIKFFQADFLDFDFSDADVIFAHATCFHDGQLRELLHKFEKLKKGARLIIVSKKVDSHSYALTNTSEHP 188          
BLAST of EWM27471.1 vs. NCBI_GenBank
Match: gi|762038908|ref|WP_043874844.1| (hypothetical protein [Legionella massiliensis] >gi|683287612|emb|CEE14074.1| Histone methylation protein DOT1 [Legionella massiliensis] >gi|685070205|emb|CDZ78336.1| Histone methylation protein DOT1 [Legionella massiliensis])

HSP 1 Score: 85.8853 bits (211), Expect = 1.196e-15
Identity = 56/162 (34.57%), Postives = 83/162 (51.23%), Query Frame = 0
Query:  156 AKESYQQGRDDREVRDKTLYYAEIDLAFLAVLLGAANPSGSGVFYDLGSGVGRAVLGAAKLARWKKAIGVEYLGGLHKEAIKYEGKFKRLRGSP--------TQFVNKDFVDVDLSDAEVVFIYATKYS----RDIDDVLATAPVGARIISLDRRLNARQYK 305
            AK S  + R    +++K   Y EID      +L   +PS   VFYDLGSG GRAVL A      +KAIG+E L  L++++ K   +FK+             TQF+N  F+  D SDA++V++ AT  S     D+   +A    G+RII   + +   Q++
Sbjct:   86 AKSSSIRYRFLHLIQNKEFIYGEIDFLSFYTILERTSPSTKDVFYDLGSGSGRAVLSAIVFFNVRKAIGIELLPPLYEQSKKTIQRFKQDNAEKEYLPQIERTQFINDSFLHYDFSDADIVYVAATCLSDTSWNDLISKMARLKPGSRIIVTTKTIEHEQFE 247          
BLAST of EWM27471.1 vs. NCBI_GenBank
Match: gi|1084045070|gb|OGK50722.1| (hypothetical protein A3B50_04450 [Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_01_FULL_40_42] >gi|1084054581|gb|OGK59657.1| hypothetical protein A3H84_00185 [Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_02_FULL_40_13])

HSP 1 Score: 83.5741 bits (205), Expect = 1.835e-15
Identity = 53/163 (32.52%), Postives = 80/163 (49.08%), Query Frame = 0
Query:  163 GRDDREVRDKTLYYAEIDLAFLAVLLGAANPSGSGVFYDLGSGVGRAVLGAAKLARWKKAIGVEYLGGLHKEAIKYEGKFKR-------LRGSP-TQFVNKDFVDVDLSDAEVVFIYATKYS----RDIDDVLATAPVGARIISLDRRLNARQYKLLKTIEDP 313
             R   +  DK L Y EI       +L   NP    VFYDLGSG G+AVL A+    + K +GVE L  L+  + +   ++++          SP  +F   DF+D D SDA+V+F +AT +     R++         GAR+I + + +++  Y L  T E P
Sbjct:   26 ARKKLQFHDKGLTYGEIVPESFYKILSQVNPQKDEVFYDLGSGTGKAVLAASLFFPFSKTVGVELLDDLYDASQQVLQRYQKEIIPRLNTSNSPEIKFFQADFLDFDFSDADVIFAHATCFHDGQLRELLHKFEKLKKGARLIIVSKEVDSHSYALTNTSEHP 188          
BLAST of EWM27471.1 vs. NCBI_GenBank
Match: gi|53752743|emb|CAH14178.1| (hypothetical protein lpp3025 [Legionella pneumophila str. Paris])

HSP 1 Score: 81.2629 bits (199), Expect = 8.391e-15
Identity = 53/174 (30.46%), Postives = 88/174 (50.57%), Query Frame = 0
Query:  161 QQGRDDREVRDKTLYYAEIDLAFLAVLLGAANPSGSGVFYDLGSGVGRAVLGAAKLARWKKAIGVEYLGGLHKEAIKYEGKFKRLRG-----SPTQFVNKDFVDVDLSDAEVVFIYATKY----SRDIDDVLATAPVGARIISLDRRLNARQYKLLKTIEDPRGDLQLVFGYVY 325
            QQ R +R+  +    Y EI+      LL  AN   + VFYDLGSG G+AV+  A +    K+IGVE    LH+ A +   K   + G         F+  DF+ VDLS+A ++FI ++         ++  L + P  + +I+  + L++ ++KL+      R  +Q+ +G V+
Sbjct:    4 QQARKNRDAIEYV--YGEIEFLPFTALLSMANIDHNTVFYDLGSGTGKAVVACAMVYPVHKSIGVELFPNLHQCACERLQKLAAMEGYTESSKKISFILGDFLTVDLSEATLIFINSSTLFGATWEALNTRLNSLPQLSTVITTSKTLSSSRFKLVT-----RAKIQMSWGVVF 170          
The following BLAST results are available for this feature:
BLAST of EWM27471.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|553183433|ref|XP_005853896.1|0.000e+0100.00hypothetical protein NGA_2114600 [Nannochloropsis ... [more]
gi|873236842|emb|CEL98332.1|9.386e-5040.00unnamed protein product [Vitrella brassicaformis C... [more]
gi|1028418383|gb|OAI48476.1|4.747e-1834.12hypothetical protein AYO45_04955 [Gammaproteobacte... [more]
gi|762036722|ref|WP_043872660.1|3.391e-1736.18hypothetical protein [Legionella massiliensis] >gi... [more]
gi|1175176992|ref|WP_081724908.1|1.940e-1628.64hypothetical protein [Legionella oakridgensis] >gi... [more]
gi|1175178754|ref|WP_081726667.1|6.767e-1628.16hypothetical protein [Legionella oakridgensis] >gi... [more]
gi|1084011597|gb|OGK19070.1|9.054e-1632.52hypothetical protein A2779_01740 [Candidatus Roizm... [more]
gi|762038908|ref|WP_043874844.1|1.196e-1534.57hypothetical protein [Legionella massiliensis] >gi... [more]
gi|1084045070|gb|OGK50722.1|1.835e-1532.52hypothetical protein A3B50_04450 [Candidatus Roizm... [more]
gi|53752743|emb|CAH14178.1|8.391e-1530.46hypothetical protein lpp3025 [Legionella pneumophi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3201rna3201Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications