rna32, rna32 (mRNA) Nannochloropsis gaditana

Overview
Namerna32
Unique Namerna32
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length774
Alignment locationCM002455.1:102053..102662 +

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Properties
Property NameValue
Productmethyltransferase type 11
Orig transcript idgnl|cribi|Naga_101995g2.958.mrna
Orig protein idgnl|cribi|Naga_101995g2.958
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:102053..102662 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101995g2gene30Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna32rna32-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM30641.1cds32Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna32 ID=rna32|Name=rna32|organism=Nannochloropsis gaditana|type=mRNA|length=774bp
ATGGTGGCACGCCAACACCACGCAGTGTGGCTGCTGCTCATTGCGAGTGC
CTCCGTCAACACCTGGGGCACGCATGCTTTTGTTGGTCCTTTTCCATCTT
TTTCGTCGAGGTCAAGACAGCTAGCATCGTCCTATTATGACGGCATGGAT
TATACAGCACGCCGCAACAAGGAGCAAGAAAAGCCAGATTGGGCTGGCGG
GGGCCCCATTTCTAGTGTAGTCTCGGCACTGATCAACAATAAGTTCCTTT
ACAATTTTATGAAAATCGGAGCGCGCAAGGTCTTGATCGACAATGCAGAG
AAAAAAGGCGTGGCGTGGCGGGAAGACGCGGAGGCTCTTTTAAAGGACAG
ACGCTTGCCCAACACCTTGTCCCGTCATTTTGGAGTGAGCCATGCCACGA
TGGACTACCCTGCCTACTACACCCAGCCCTTCCACGCTTATGAGGATGGG
AACCTGAACTGGCTGGCGGCGGCCGAGGTGGAGAGTGCTACCAGCGCCAT
GTGCTTGCGGGTGTGGCCCAAAGACGCCGGCATAAAACCCGAGGAGGCGC
AAGACCGGCTCCGGGACTCCTACCAGAAGGAGATCCGGCGGCACATGCAG
GAGCATGGCACAGATCCCAGCCGTCAGGACTTAAATACGTGGGGTGCTCG
GCGGGAGTGTCCACGCGCTACCTCCGTCGGTGTTTTCCCTCCCAATCCAT
CACGGGCTTGGACCTCTCCCCTTTCTTCTTGGCCGTCGCCCAGCTCCGGG
AGGAGGAAGCCCCCTTGGGCCTGA
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protein sequence of rna32

>rna32-protein ID=rna32-protein|Name=rna32|organism=Nannochloropsis gaditana|type=polypeptide|length=105bp
MFLLSPLFSCLLVLLCLPPSLPSSPPPSLPLPGGTLAITDNDPRSPVIQG
LPKPIALLMKSTEPFSDEYFSLDMEAMLEEVGFEAVETVATDPRHRTILA
TKPRS
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mRNA from alignment at CM002455.1:102053..102662+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna32 ID=rna32|Name=rna32|organism=Nannochloropsis gaditana|type=mRNA|length=610bp|location=Sequence derived from alignment at CM002455.1:102053..102662+ (Nannochloropsis gaditana)
cctctttttctcgtTTTATATTTTCCTCTTATTCAACCATTGCGTAAATA
GGACTTAtgttccttctttctcctctcttctcatgtcttcttgtccttct
ttgcctccctccctccctcccttcctcccctcctccctccctccctctcc
caggcggCACCTTGGCCATCACTGACAACGACCCGCGCTCCCCCGTcatc
caaggcctccccAAACCCATCGCCCTGCTCATGAAGAGCACCGAGCCCTT
CTCGGACGAATACTTCAGCCTGGACATGGAGGCtatgctggaggaggtgg
gcttCGAAGCGGTCGAGACGGTGGCTACCGACCCCCGGCATCGGACCATC
CTGGCGACCAAACCCCGGTCGTAACCCCGAAGCGCGGGCGGTATTTTTCG
GGGATTTAACCACGCCTGGCCCCAGACATCGGTGATTTCTCGGCCGTCCT
CTGCTTGAAAAGGCCGATGGATGGGgttgaagaagggaaggaacaggggg
cggagaaggcaggggtaCCATAGGCTGATGGAGCGTCCAATATGGCGTAG
GATGCATGCATATTAATGGGCACGGTCGGCAAAAGAAAAACAAACGATCG
AAGCCTTTCT
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Coding sequence (CDS) from alignment at CM002455.1:102053..102662+

>rna32 ID=rna32|Name=rna32|organism=Nannochloropsis gaditana|type=CDS|length=318bp|location=Sequence derived from alignment at CM002455.1:102053..102662+ (Nannochloropsis gaditana)
Atgttccttctttctcctctcttctcatgtcttcttgtccttctttgcct
ccctccctccctcccttcctcccctcctccctccctccctctcccaggcg
gCACCTTGGCCATCACTGACAACGACCCGCGCTCCCCCGTcatccaaggc
ctccccAAACCCATCGCCCTGCTCATGAAGAGCACCGAGCCCTTCTCGGA
CGAATACTTCAGCCTGGACATGGAGGCtatgctggaggaggtgggcttCG
AAGCGGTCGAGACGGTGGCTACCGACCCCCGGCATCGGACCATCCTGGCG
ACCAAACCCCGGTCGTAA
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Synonyms
Publications