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Properties
| Property Name | Value |
|---|
| Product | Mak16 protein |
| Orig transcript id | gnl|cribi|Naga_100174g3.7298.mrna |
| Orig protein id | gnl|cribi|Naga_100174g3.7298 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:981931..984098 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3199 ID=rna3199|Name=rna3199|organism=Nannochloropsis gaditana|type=mRNA|length=855bp
ATGGTCAACTCAAGTCGCATAATAAATGGGGCCCTCTTCCTCGCCTTTGT
GGTTGCTTTGACACAAGGATATCACTTCCCGCCCACGACACGAAGTTTGC
AGCGGAGGTGCATGAGAAGTGTGTCCCGGTACCACGCCGCAGGAAACCCC
CGAGCCCGCCACAGCCTCCTTCCTATGCCTTCATCCATCTCCGACTTCCT
GGACGACACGGCCGACGTGGACAAGGAGCCCCGGCCTTCGCCCGCGGCCG
CTGTGGGAGTGGGTGACGCGGCCCCGAAAAGCGACCCAAACGTGCAATAT
TTCGTGCGGTGCGGGCGGTGCAACGCTGCCTACGCCGTGGGCGCGGATTT
GGTCCGTCCTGAGGGGGGGAGGGTCAAGTGCGAGGTGTGTGGACACACCT
GGTTCCAAGCTTCCAACCGGCTGCAGGTCCTGAGCCCGGGCTATGTGCTC
AAGGACTACCCGGAGGATCTGAAGGAAAAAGTGGCGGAGAACGTCCGGAA
CAACAGGCACCCCCTGGACACGAGCGCGGCCAAGGGGGCCATCTCGGTCT
TTGTCGGCAATTTGCCATTTTCGATGGCGGAGGCGGACGTGCAGGAAATG
TTCAGCGAGCACGGGGGCGTGGTGTCTGTCACCATCGTCAAGGACCAGCT
CAACCGCTCCAAGGGCTTCGGCTTTGTCGAGATGGCGGACAAGGAAGAAG
GCGAGCGCGCCATCGCCGCCTTGGACGGGAGGGAGATGGACGGGCGGCCT
ATTAATGTGCGATTGGGGACCAGCAAAGCCCAACCCAGGATGCGCAAGGA
GCGGACGCAGATGAAAAGGGCGGGCGGAGGGGGATCGGGAGGCAGCGAAG
AGTGA back to topprotein sequence of rna3199 >rna3199-protein ID=rna3199-protein|Name=rna3199|organism=Nannochloropsis gaditana|type=polypeptide|length=325bp
MSAPDEIIWQIINHQFCSFKSKINAKEHTFCRNPYNVTGLCLRSACPLAN
SRYATIREEEGHCYLLLKTAERAHTPAKLWEKIRLPSNYAKALEKVSEAL
EYFPKYLQHRNKQRLTKIHQYLIRMRELKLKANKPKLVGIHKKVDRREKK
REAKALAAAKLEQNIEKELLARLRQGTYGDIYNFPETTYHKVLDEEGEDE
EEEEEEEEEEEEEYVEGEEEEESEEEEEEEEREFVTGDFEEEEDMEDGAS
YLLEEEEEDYDEVKAKAVLRAEAKGNKRGRGERKAERGRRGVAVTLRNRR
RGRNRRTRTWRSSTRTRRRWQVWRL back to topmRNA from alignment at CM002460.1:981931..984098+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3199 ID=rna3199|Name=rna3199|organism=Nannochloropsis gaditana|type=mRNA|length=2168bp|location=Sequence derived from alignment at CM002460.1:981931..984098+ (Nannochloropsis gaditana)
AAGGATATCTAACCGCTGGCTAGGCTATTGGTTGCCTCTTGTTCCTTTTC
AGgcattccttttttttcaattACCTAAAAAGGCGTCCCGTGGCATCTAC
AAGGTCTCTGATGGATGAGAAGCGGCCATCATTTTGTGATTTCAAGGCGT
TTGACGTCCAGACTAGGAAGGACTTCCTTTCACTGCTGGCTCTCGCGTTG
TAGTACCCCTAGTAGGAGCCCTGAGTATTTCGTACTACCATAGTATGCCT
GCGTCCCCATCTAACTCAGCTAATCACTtcatctccttcgctttctaATA
CAACATTTCAGAATCGAAAGGCATCTACGAAAGCATTTCGTGCCAGCAGA
TTGTACCGTAGATAAAAAGCCGTGCCAGCACCACTTTATCGGTAGCCATG
AGCGCTCCCGACGAGATCATCTGGCAAATCATCAACCATCAGTTTTGCTC
CTTCAAATCTAAGTACGTATTGACCTCAATGGCACCTGTGCGGGCATTTT
TTTGGCCCGGGTCCTGCCTTGTTGCCTTTCCGCCACGGTCATGACGGTct
tgcctccaccttcacTCCCCTTTTCCGCCATAtcgccctttctccttccc
ttaagcttcctcctttctcaatGAACAAACGTCCTTACCACCCCTTAGAA
TCAATGCCAAAGAGCACACCTTCTGCCGGAACCCCTACAACGTGAcgggc
ctctgcctccgttCCGCCTGTCCGTTAGCAAACAGCCGTTACGCTACcat
ccgggaggaggaagggcactGCTACCTGTTGCTTAAGACTGCTGAACGCG
CCCATACCCCCGCCAAATTGTGGGAAAAGATTCGACTGCCCAGCAATTAT
GCCAAGGCCCTGGAAAAAGTGTCGGAGGCATTGGAGTACTTTCCCAAGTA
CTTGCAGCATCGTAACAAGCAGCGCTTGACCAAAATACACCAGTACTTGA
TCCGTATGCGTGAATTGAAGCTGAAGGCGAACAAGCCCAAGCTAGTCGGC
ATTCATAAGAAGGTACGGcaaggacgggggaagggagggaggcagagagg
aaggaagggaggaggccgccggAGGCCAAACCGAGACAATGTACGGGAGG
TAGCGTTCACTAAAACGAGAACCTTTCAATTTTCTTCGCGGGGTTGCACC
AGGTGGATCGCCGAGAGAAAAAGCGGGAGGCAaaggcgctggcggcggcg
aaacTGGAGCAAAATATTGAGAAGGAGTTATTGGCCCGTCTCCGGCAAGG
GACCTACGGAGATATCTACAATTTCCCCGAAACGACCTATCACAAGGtgt
tggacgaggaaggagaagacgaagaggaggaggaggaggaggaggaggag
gaggaggaggagtacgtggagggggaagaggaggaggagagtgaagagga
ggaggaggaggaagaaagggaattCGTAACAGGGGActtcgaggaggagg
aagatatggaggacggggcttCGTACctgttggaggaagaggaggaggac
tacGACGAAGTGAAAGCGAAGGCGGTGTTGAGGGCAGAGGCCAAGGGGAA
CaagcggggacggggggagaggaaggcggagaggggaagacggggggtCG
CAGTCACCTTAAGAAaccgaagaaggggaagaaaccGTCGTACCCGCACG
TGGAGATCGAgtacgaggacgaggaggaggtggcaggTTTGGAGACTGTA
GGAGGATCGTAGTCAGGCGGTCGGGGCCAGGGGCGGGCAGGCGcgggcgt
ggaaggaggccggaggaggcgataGTGTGGATTCGGGCTGTACATGCGGG
CAACGCACAAAGTATTGGGGAACGATCTCGGGCGCCGAGGCCATTATTTT
CGGGAAGTAAGGCTGTACATGTTGAAGCCATCCTTTACTTTGGACCAACT
CAGAGAAGGGAGTGCTTTATTCGTGTCATCGCCCCTTCATTTGACTTCTC
TCTTTGAGAAAGAAATTCTTATTGGTGCGATGAAGGCATCAGGCTTGACA
TCTCAATCCTTTGTCCCGTCGTCACTCACAAACACACAAAGACGGAGCAT
GCGGGTGGCAGCCGAACGGAGCACATGGGCAGATGTCCTGTTTCCTCGTA
TTTAGTCACGACTCAATGTACAGCTTTCATATTAAGAAATATTTTGGTTT
GTTGTAAGACATGAGATC back to topCoding sequence (CDS) from alignment at CM002460.1:981931..984098+ >rna3199 ID=rna3199|Name=rna3199|organism=Nannochloropsis gaditana|type=CDS|length=2934bp|location=Sequence derived from alignment at CM002460.1:981931..984098+ (Nannochloropsis gaditana)
ATGAGCGCTCCCGACGAGATCATCTGGCAAATCATCAACCATCAGTTTTG
CTCCTTCAAATCTAAAATCAATGCCAAAGAGCACACCTTCTGCCGGAACC
CCTACAACGTGAcgggcctctgcctccgttCCGCCTGTCCGTTAGCAAAC
AGCCGTTACGCTACcatccgggaggaggaagggcactGCTACCTGTTGCT
TAAGACTGCTGAACGCGCCCATACCCCCGCCAAATTGTGGGAAAAGATTC
GACTGCCCAGCAATTATGCCAAGGCCCTGGAAAAAGTGTCGGAGGCATTG
GAGTACTTTCCCAAGTACTTGCAGCATCGTAACAAGCAGCGCTTGACCAA
AATACACCAGTACTTGATCCGTATGCGTGAATTGAAGCTGAAGGCGAACA
AGCCCAAGCTAGTCGGCATTCATAAGAAGGTGGATCGCCGAGAGAAAAAG
CGGGAGGCAaaggcgctggcggcggcgaaacTGGAGCAAAATATTGAGAA
GGAGTTATTGGCCCGTCTCCGGCAAGGGACCTACGGAGATATCTACAATT
TCCCCGAAACGACCTATCACAAGGtgttggacgaggaaggagaagacgaa
gaggaggaggaggaggaggaggaggaggaggaggaggagtacgtggaggg
ggaagaggaggaggagagtgaagaggaggaggaggaggaagaaagggaat
tCGTAACAGGGGActtcgaggaggaggaagatatggaggacggggcttCG
TACctgttggaggaagaggaggaggactacGACGAAGTGAAAGCGAAGGC
GGTGTTGAGGGCAGAGGCCAAGGGGAACaagcggggacggggggagagga
aggcggagaggggaagacggggggtCGCAGTCACCTTAAGAAaccgaaga
aggggaagaaaccGTCGTACCCGCACGTGGAGATCGAgtacgaggacgag
gaggaggtggcaggTTTGGAGACTGTAGATGAGCGCTCCCGACGAGATCA
TCTGGCAAATCATCAACCATCAGTTTTGCTCCTTCAAATCTAAAATCAAT
GCCAAAGAGCACACCTTCTGCCGGAACCCCTACAACGTGAcgggcctctg
cctccgttCCGCCTGTCCGTTAGCAAACAGCCGTTACGCTACcatccggg
aggaggaagggcactGCTACCTGTTGCTTAAGACTGCTGAACGCGCCCAT
ACCCCCGCCAAATTGTGGGAAAAGATTCGACTGCCCAGCAATTATGCCAA
GGCCCTGGAAAAAGTGTCGGAGGCATTGGAGTACTTTCCCAAGTACTTGC
AGCATCGTAACAAGCAGCGCTTGACCAAAATACACCAGTACTTGATCCGT
ATGCGTGAATTGAAGCTGAAGGCGAACAAGCCCAAGCTAGTCGGCATTCA
TAAGAAGGTGGATCGCCGAGAGAAAAAGCGGGAGGCAaaggcgctggcgg
cggcgaaacTGGAGCAAAATATTGAGAAGGAGTTATTGGCCCGTCTCCGG
CAAGGGACCTACGGAGATATCTACAATTTCCCCGAAACGACCTATCACAA
GGtgttggacgaggaaggagaagacgaagaggaggaggaggaggaggagg
aggaggaggaggaggagtacgtggagggggaagaggaggaggagagtgaa
gaggaggaggaggaggaagaaagggaattCGTAACAGGGGActtcgagga
ggaggaagatatggaggacggggcttCGTACctgttggaggaagaggagg
aggactacGACGAAGTGAAAGCGAAGGCGGTGTTGAGGGCAGAGGCCAAG
GGGAACaagcggggacggggggagaggaaggcggagaggggaagacgggg
ggtCGCAGTCACCTTAAGAAaccgaagaaggggaagaaaccGTCGTACCC
GCACGTGGAGATCGAgtacgaggacgaggaggaggtggcaggTTTGGAGA
CTGTAGATGAGCGCTCCCGACGAGATCATCTGGCAAATCATCAACCATCA
GTTTTGCTCCTTCAAATCTAAAATCAATGCCAAAGAGCACACCTTCTGCC
GGAACCCCTACAACGTGAcgggcctctgcctccgttCCGCCTGTCCGTTA
GCAAACAGCCGTTACGCTACcatccgggaggaggaagggcactGCTACCT
GTTGCTTAAGACTGCTGAACGCGCCCATACCCCCGCCAAATTGTGGGAAA
AGATTCGACTGCCCAGCAATTATGCCAAGGCCCTGGAAAAAGTGTCGGAG
GCATTGGAGTACTTTCCCAAGTACTTGCAGCATCGTAACAAGCAGCGCTT
GACCAAAATACACCAGTACTTGATCCGTATGCGTGAATTGAAGCTGAAGG
CGAACAAGCCCAAGCTAGTCGGCATTCATAAGAAGGTGGATCGCCGAGAG
AAAAAGCGGGAGGCAaaggcgctggcggcggcgaaacTGGAGCAAAATAT
TGAGAAGGAGTTATTGGCCCGTCTCCGGCAAGGGACCTACGGAGATATCT
ACAATTTCCCCGAAACGACCTATCACAAGGtgttggacgaggaaggagaa
gacgaagaggaggaggaggaggaggaggaggaggaggaggaggagtacgt
ggagggggaagaggaggaggagagtgaagaggaggaggaggaggaagaaa
gggaattCGTAACAGGGGActtcgaggaggaggaagatatggaggacggg
gcttCGTACctgttggaggaagaggaggaggactacGACGAAGTGAAAGC
GAAGGCGGTGTTGAGGGCAGAGGCCAAGGGGAACaagcggggacgggggg
agaggaaggcggagaggggaagacggggggtCGCAGTCACCTTAAGAAac
cgaagaaggggaagaaaccGTCGTACCCGCACGTGGAGATCGAgtacgag
gacgaggaggaggtggcaggTTTGGAGACTGTAG back to top
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