EWM27483.1, cds3191 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27483.1 vs. NCBI_GenBank
Match: gi|585109744|gb|EWM27483.1| (Mak16 protein [Nannochloropsis gaditana]) HSP 1 Score: 652.514 bits (1682), Expect = 0.000e+0 Identity = 325/325 (100.00%), Postives = 325/325 (100.00%), Query Frame = 0
Query: 1 MSAPDEIIWQIINHQFCSFKSKINAKEHTFCRNPYNVTGLCLRSACPLANSRYATIREEEGHCYLLLKTAERAHTPAKLWEKIRLPSNYAKALEKVSEALEYFPKYLQHRNKQRLTKIHQYLIRMRELKLKANKPKLVGIHKKVDRREKKREAKALAAAKLEQNIEKELLARLRQGTYGDIYNFPETTYHKVLDEEGEDEEEEEEEEEEEEEEYVEGEEEEESEEEEEEEEREFVTGDFEEEEDMEDGASYLLEEEEEDYDEVKAKAVLRAEAKGNKRGRGERKAERGRRGVAVTLRNRRRGRNRRTRTWRSSTRTRRRWQVWRL 325
MSAPDEIIWQIINHQFCSFKSKINAKEHTFCRNPYNVTGLCLRSACPLANSRYATIREEEGHCYLLLKTAERAHTPAKLWEKIRLPSNYAKALEKVSEALEYFPKYLQHRNKQRLTKIHQYLIRMRELKLKANKPKLVGIHKKVDRREKKREAKALAAAKLEQNIEKELLARLRQGTYGDIYNFPETTYHKVLDEEGEDEEEEEEEEEEEEEEYVEGEEEEESEEEEEEEEREFVTGDFEEEEDMEDGASYLLEEEEEDYDEVKAKAVLRAEAKGNKRGRGERKAERGRRGVAVTLRNRRRGRNRRTRTWRSSTRTRRRWQVWRL
Sbjct: 1 MSAPDEIIWQIINHQFCSFKSKINAKEHTFCRNPYNVTGLCLRSACPLANSRYATIREEEGHCYLLLKTAERAHTPAKLWEKIRLPSNYAKALEKVSEALEYFPKYLQHRNKQRLTKIHQYLIRMRELKLKANKPKLVGIHKKVDRREKKREAKALAAAKLEQNIEKELLARLRQGTYGDIYNFPETTYHKVLDEEGEDEEEEEEEEEEEEEEYVEGEEEEESEEEEEEEEREFVTGDFEEEEDMEDGASYLLEEEEEDYDEVKAKAVLRAEAKGNKRGRGERKAERGRRGVAVTLRNRRRGRNRRTRTWRSSTRTRRRWQVWRL 325
BLAST of EWM27483.1 vs. NCBI_GenBank
Match: gi|676379133|ref|XP_009032845.1| (hypothetical protein AURANDRAFT_4711, partial [Aureococcus anophagefferens] >gi|323456307|gb|EGB12174.1| hypothetical protein AURANDRAFT_4711, partial [Aureococcus anophagefferens]) HSP 1 Score: 280.026 bits (715), Expect = 6.501e-91 Identity = 145/232 (62.50%), Postives = 179/232 (77.16%), Query Frame = 0
Query: 5 DEIIWQIINHQFCSFKSKINAKEHTFCRNPYNVTGLCLRSACPLANSRYATIREEEGHCYLLLKTAERAHTPAKLWEKIRLPSNYAKALEKVSEALEYFPKYLQHRNKQRLTKIHQYLIRMRELKLKANKPKLVGIHKKVDRREKKREAKALAAAKLEQNIEKELLARLRQGTYGDIYNFPETTYHKVLDEEGEDE------EEEEEEEEEEEEEYVEGEEEEESEEEEEEE 230
DE+IWQ +N FCSFKS + +K H FCRN NVTGLC +SACPLANSRYATIRE EG CYL++KT ERAH P KLW+KI+LP NYAKAL V+E LE+FPK+LQHRNKQRLT+I+QYLIRMR+L L++ +P + +HKKV+RRE ++E KAL AAKL ++IE ELL RL+QGTYGDIYNFPE Y+ LD + E E E+EEEEE EY+E E+ ES+ E+ E+
Sbjct: 2 DELIWQSLNGNFCSFKSTV-SKTHNFCRNEQNVTGLCNKSACPLANSRYATIREIEGRCYLMIKTIERAHMPKKLWQKIKLPRNYAKALAVVTEELEHFPKFLQHRNKQRLTRIYQYLIRMRKLALRS-RPHMAVVHKKVERRENRKEVKALVAAKLNKSIESELLQRLKQGTYGDIYNFPEMHYNAALDSAQDLELAEMEAEYEDEEEEERLVEYIEAAEDFESDMEDLED 231
BLAST of EWM27483.1 vs. NCBI_GenBank
Match: gi|299115323|emb|CBN74140.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 276.559 bits (706), Expect = 6.581e-88 Identity = 161/252 (63.89%), Postives = 186/252 (73.81%), Query Frame = 0
Query: 5 DEIIWQIINHQFCSFKSKINAKEHTFCRNPYNVTGLCLRSACPLANSRYATIREEEGHCYLLLKTAERAHTPAKLWEKIRLPSNYAKALEKVSEALEYFPKYLQHRNKQRLTKIHQYLIRMRELKLKANKPKLVGIHKKVDRREKKREAKALAAAKLEQNIEKELLARLRQGTYGDIYNFPETTYHKVLDEEGEDEEEEEEEEEEEEEEYVEGEEEEESEEEEEEEEREFVTGDFEEEE-DMED----GASY 251
D++IWQ++N+QFCSFKSKI AKE TFCRN YNVTGLC +S+CPLANSRYATIRE +G CYL +KT ERAHTP LWEKI+L NY KALE+VS LE+FPK+LQHR+KQRLTKIHQYLIRMR+LKLKA KLV I+ KV++REK RE KAL AAKLE++IE ELL RL++GTYGDIYNFPE Y K L E E+EY E E EEEEEEE D EE+E D+ED G SY
Sbjct: 4 DDVIWQVVNYQFCSFKSKI-AKEQTFCRNEYNVTGLCNKSSCPLANSRYATIREHDGVCYLYIKTIERAHTPKNLWEKIKLSRNYGKALERVSRELEFFPKHLQHRSKQRLTKIHQYLIRMRKLKLKAKP-KLVTINPKVEKREKMREKKALVAAKLERSIEGELLERLKKGTYGDIYNFPEVQYDKAL--------------MEAEDEYAEQNPEAMEEEEEEEEGEVEYVEDLEEDESDIEDTAEWGGSY 239
BLAST of EWM27483.1 vs. NCBI_GenBank
Match: gi|953502864|emb|CEG36191.1| (RNA-binding nuclear protein (MAK16) containing a distinct C4 Zn-finger [Plasmopara halstedii]) HSP 1 Score: 272.707 bits (696), Expect = 5.371e-87 Identity = 125/194 (64.43%), Postives = 158/194 (81.44%), Query Frame = 0
Query: 5 DEIIWQIINHQFCSFKSKINAKEHTFCRNPYNVTGLCLRSACPLANSRYATIREEEGHCYLLLKTAERAHTPAKLWEKIRLPSNYAKALEKVSEALEYFPKYLQHRNKQRLTKIHQYLIRMRELKLKANKPKLVGIHKKVDRREKKREAKALAAAKLEQNIEKELLARLRQGTYGDIYNFPETTYHKVLDEEGE 198
DE+IW +I+ QFCSFKSK+ + FC N YNVTGLC RSACPLANSRYAT+REE G CYL +KT ERAHTP +LWE+++L NY K+L ++ E L+++PK L H+ KQRLTKIHQYL+RMR+L L+ KPKLV I+KK+DRREK+RE KA+ AAKL+ +IEKELL RL++GTYGDIYNFPE + KVL ++G+
Sbjct: 4 DEVIWSVISKQFCSFKSKLPDTKSMFCSNLYNVTGLCNRSACPLANSRYATVREENGVCYLYMKTIERAHTPNRLWERVKLSKNYTKSLAQIDEQLQFWPKKLIHKCKQRLTKIHQYLMRMRKLTLQT-KPKLVVINKKIDRREKRREKKAMVAAKLDNSIEKELLERLQKGTYGDIYNFPEREFSKVLADKGK 196
BLAST of EWM27483.1 vs. NCBI_GenBank
Match: gi|219129683|ref|XP_002185012.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217403507|gb|EEC43459.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 268.855 bits (686), Expect = 1.932e-85 Identity = 127/196 (64.80%), Postives = 157/196 (80.10%), Query Frame = 0
Query: 5 DEIIWQIINHQFCSFKSKI----NAKEHTFCRNPYNVTGLCLRSACPLANSRYATIREEEGHCYLLLKTAERAHTPAKLWEKIRLPSNYAKALEKVSEALEYFPKYLQHRNKQRLTKIHQYLIRMRELKLK---ANKPKLVGIHKKVDRREKKREAKALAAAKLEQNIEKELLARLRQGTYGDIYNFPETTYHKVL 193
DE+IW +INHQFCSFK+ I + K H FCR+PY+VTGLC R++CPLANS+YATIREE G +L +KT ERAH+P LWEKI L NY KAL ++ E L++FPK L HRNKQRLTKIHQYLIRMR+++LK K K+VG+H+K+D+RE++RE KAL AAK+E+NIEKEL RL +GTYGDIYNFPET+Y K L
Sbjct: 4 DEMIWSVINHQFCSFKTTIGKALSDKTH-FCRHPYSVTGLCNRTSCPLANSKYATIREENGRIHLYMKTVERAHSPKNLWEKIVLSRNYGKALAQLDEHLQFFPKVLMHRNKQRLTKIHQYLIRMRKIELKVRSGRKAKMVGVHRKIDQREERRERKALVAAKIERNIEKELTERLAKGTYGDIYNFPETSYQKAL 198
BLAST of EWM27483.1 vs. NCBI_GenBank
Match: gi|551665644|ref|XP_005835584.1| (hypothetical protein GUITHDRAFT_159496 [Guillardia theta CCMP2712] >gi|428179734|gb|EKX48604.1| hypothetical protein GUITHDRAFT_159496 [Guillardia theta CCMP2712]) HSP 1 Score: 269.24 bits (687), Expect = 3.092e-85 Identity = 126/190 (66.32%), Postives = 151/190 (79.47%), Query Frame = 0
Query: 5 DEIIWQIINHQFCSFKSKINAKEHTFCRNPYNVTGLCLRSACPLANSRYATIREEEGHCYLLLKTAERAHTPAKLWEKIRLPSNYAKALEKVSEALEYFPKYLQHRNKQRLTKIHQYLIRMRELKLKANKPKLVGIHKKVDRREKKREAKALAAAKLEQNIEKELLARLRQGTYGDIYNFPETTYHKVLD 194
DE+IWQ IN QFCSFK+++ KE FCRN +NVTGLC R +CPLANS+YATI EE+G C L +KT ERAH+PA LWEKIRL NYAKAL+++ E L+Y+P +L H+ KQRLTKI QYLIRMR+L L+ +PKLVG+HKKV++RE+ REAKAL AA +E IEKELL RLR GTYGDIYNFP Y LD
Sbjct: 4 DEVIWQTINQQFCSFKARLTDKEQNFCRNEHNVTGLCNRQSCPLANSQYATIHEEDGECILYIKTIERAHSPANLWEKIRLSKNYAKALQQIDEHLKYWPNFLVHKCKQRLTKITQYLIRMRKLSLQV-RPKLVGVHKKVEKRERNREAKALRAANIEGAIEKELLERLRSGTYGDIYNFPMKEYSNALD 192
BLAST of EWM27483.1 vs. NCBI_GenBank
Match: gi|301118847|ref|XP_002907151.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262105663|gb|EEY63715.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 259.996 bits (663), Expect = 8.276e-83 Identity = 128/194 (65.98%), Postives = 162/194 (83.51%), Query Frame = 0
Query: 5 DEIIWQIINHQFCSFKSKINAKEHTFCRNPYNVTGLCLRSACPLANSRYATIREEEGHCYLLLKTAERAHTPAKLWEKIRLPSNYAKALEKVSEALEYFPKYLQHRNKQRLTKIHQYLIRMRELKLKANKPKLVGIHKKVDRREKKREAKALAAAKLEQNIEKELLARLRQGTYGDIYNFPETTYHKVLDEEGE 198
DE+IW +I++QFCSFKSK+ + FC NPYNVTGLC RSACPLANSRYATIREE+G CYL +KT ERAHTP +LWE+++L NY K+L ++ E L+++PK L H+NKQRLTKIHQYL+RMR+L LK KPKLV I+KK++RREK+RE KA+ AAKL+ +IEKELL RL++GTYGDIYNFPE + KVL ++G+
Sbjct: 4 DEVIWSVISNQFCSFKSKLPGTGNMFCSNPYNVTGLCNRSACPLANSRYATIREEDGVCYLYMKTIERAHTPNRLWERVKLSKNYTKSLAQIDEQLQFWPKKLIHKNKQRLTKIHQYLMRMRKLTLKT-KPKLVVINKKIERREKRREKKAMVAAKLDNSIEKELLERLQKGTYGDIYNFPEREFSKVLADKGK 196
BLAST of EWM27483.1 vs. NCBI_GenBank
Match: gi|828217233|ref|XP_012560593.1| (PREDICTED: protein MAK16 homolog [Hydra vulgaris]) HSP 1 Score: 260.766 bits (665), Expect = 1.119e-82 Identity = 139/232 (59.91%), Postives = 177/232 (76.29%), Query Frame = 0
Query: 5 DEIIWQIINHQFCSFKSKINAKEHTFCRNPYNVTGLCLRSACPLANSRYATIREEEGHCYLLLKTAERAHTPAKLWEKIRLPSNYAKALEKVSEALEYFPKYLQHRNKQRLTKIHQYLIRMRELKLKANKPKLVGIHKKVDRREKKREAKALAAAKLEQNIEKELLARLRQGTYGDIYNFPETTYHKVL-DEEGEDEEEEEEEEEEEEE------EYVEGEEEEESEEEEEE 229
DE+IWQ+IN FCSFK K + T C+N YNV+GLC R +CPLANSRYATIRE+EG CYL +KT ERAHTP+KLWEKI+L NY A+E++ + L Y+P Y+ H+ KQR T+I QYLIRMR+L+LK K KLV ++KK++RREK RE KAL AA++E+NIEKELL RL++GTYGDIYNFPET + KVL D+E E + E E+EEE EE E+V +E EE++ E E+
Sbjct: 4 DEVIWQLINRGFCSFKVK--TQTTTLCKNEYNVSGLCNRQSCPLANSRYATIREKEGVCYLYMKTIERAHTPSKLWEKIKLARNYESAMEQIDKNLIYWPSYIIHKCKQRFTRITQYLIRMRKLRLKTQK-KLVTVNKKIERREKTREKKALVAAQIEKNIEKELLERLKKGTYGDIYNFPETAFDKVLEDQEIESDHGENEDEEEVEEDGEDIPEFVADDEIEETDNEMED 232
BLAST of EWM27483.1 vs. NCBI_GenBank
Match: gi|1214711125|gb|OWZ22158.1| (hypothetical protein PHMEG_0003185 [Phytophthora megakarya]) HSP 1 Score: 258.07 bits (658), Expect = 5.379e-82 Identity = 128/194 (65.98%), Postives = 160/194 (82.47%), Query Frame = 0
Query: 5 DEIIWQIINHQFCSFKSKINAKEHTFCRNPYNVTGLCLRSACPLANSRYATIREEEGHCYLLLKTAERAHTPAKLWEKIRLPSNYAKALEKVSEALEYFPKYLQHRNKQRLTKIHQYLIRMRELKLKANKPKLVGIHKKVDRREKKREAKALAAAKLEQNIEKELLARLRQGTYGDIYNFPETTYHKVLDEEGE 198
DE+IW +I+ QFCSFKSK+ + FC NPYNVTGLC RSACPLANSRYATIREEEG CYL +KT ERAHTP +LWE+++L NY K+L ++ E L+++PK + H+NKQRLTKIHQYL+RMR+L LK KPKLV I+KK++RREK+RE KA+ AAKL+ +IEKELL RL++GTYGDIYNFPE + KVL + G+
Sbjct: 4 DEVIWSVISKQFCSFKSKLPGTGNMFCSNPYNVTGLCNRSACPLANSRYATIREEEGVCYLYMKTIERAHTPNRLWERVKLSKNYTKSLAQIDEQLQFWPKKMVHKNKQRLTKIHQYLMRMRKLTLKT-KPKLVVINKKIERREKRREKKAMVAAKLDNSIEKELLERLQKGTYGDIYNFPEREFSKVLADNGK 196
BLAST of EWM27483.1 vs. NCBI_GenBank
Match: gi|325182822|emb|CCA17277.1| (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 259.61 bits (662), Expect = 6.080e-82 Identity = 147/292 (50.34%), Postives = 196/292 (67.12%), Query Frame = 0
Query: 5 DEIIWQIINHQFCSFKSKINAKEHTFCRNPYNVTGLCLRSACPLANSRYATIREEEGHCYLLLKTAERAHTPAKLWEKIRLPSNYAKALEKVSEALEYFPKYLQHRNKQRLTKIHQYLIRMRELKLKANKPKLVGIHKKVDRREKKREAKALAAAKLEQNIEKELLARLRQGTYGDIYNFPETTYHKVLDEEGEDEEEEEEEEEEEEE---------EYVEGEEEEESEEEEEEEEREFVTGDFEEEEDMEDGASYLLEEEEEDYDEV--KAKAVLRAEAKGNKRGRGERKA 285
DE+IW +I+ QFCSFKSK+ A + FCRN YNV+GLC R ACPLANSRYAT+RE+EG CYL +KT ERAH+P +LWE+I+L NY+++LE++ + L+++PK + H+ KQR TKIHQYL+RMR+L+ + KPKLV I+KK++RRE +RE KA AAAK++ IEKELL RL +GTYGDIYNFPE + +++ +G + EEE EEE E EYVE EE E E E DFE E S +++ +D DE + K L+ NK+ + RKA
Sbjct: 4 DEVIWGVISGQFCSFKSKLPATKAMFCRNEYNVSGLCNRGACPLANSRYATVREQEGICYLYMKTIERAHSPKRLWERIKLSRNYSRSLEQIDQHLQFWPKKMIHKVKQRQTKIHQYLLRMRKLQGQI-KPKLVVINKKIERRESRREKKAQAAAKIDSAIEKELLERLEKGTYGDIYNFPEKEFSAIINNKGVAQTEEENGVEEELEYENEENALTEYVEDFEESEDEIE-----------DFESGNISESDESTTSDDDNQDEDECIGRRKRGLKDSTNANKKSKS-RKA 282 The following BLAST results are available for this feature:
BLAST of EWM27483.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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