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Properties
| Property Name | Value |
|---|
| Product | rna-binding protein |
| Orig transcript id | gnl|cribi|Naga_100174g2.7295.mrna |
| Orig protein id | gnl|cribi|Naga_100174g2.7295 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:979593..981349 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3198 ID=rna3198|Name=rna3198|organism=Nannochloropsis gaditana|type=mRNA|length=1047bp
ATGGTTGTGAACTTGAGGTCTCTCCGTGTTTCGACCGGTGCCGCCGGAGT
GGCGCGACACTTGCGTTACAAAGCAATCCTTTCACCGCTTCAAAATGCAA
ACAAGCCCACCATGGACGACTTCCTTGGAAAATTGGCAGACACTTCCACA
GCCTGGGATGAGCAGCAATTGCACGTTTTAAAGTCCCTGGCCCTGGAAAG
GTCAGGTCTTCCATCGCACGCCCGGGGGCTGGCGTGGCGTTTCTTTTTGC
ACGTCTTGCCTCCCACACGAGAGGGCGGGGCCTCCTTGGCCAGAGATAAA
TTGGGGGAGTGGCCCGTACGGTTACAGGCAGCACGGCAACAATATGCGGA
CTGGAAGCAACAGCTGTATCCAGACTTTACTCGTGTAAGCAAGGAGGGCG
ATGATGACCCGTTGTCCGCCTTGACGGCGGCCCCGAAAGAGGAGCTGACG
AGGGAGGAGGTTGAGGAAGGGAAAGACGGAGAAGAGACAACGAAGGAGGG
GAGCAAAGACAAGGAAGGACCGCTGAGGAGGGAAGGAAGTAAGGCGAGGA
AGCCAGGGGCCGGAGAGGGCGGAGCGTGGAGGAGGTACTATGCGGGGTTG
GAGCTGCTGGAGGAAGTTCGGCGGGATTTGTCACGCTTGTACCCTCTGGG
CGTGGACGAGGCGCATTTTACGCGTCCGAAGGCTCAAGAAATGCTTCTGG
CCGTTCTATTTGTGTGGGCGAGCTTGCACCAGGCCACGAGCTACCGGCAG
GGCATGCACGAAGTGGCGGCGGTGTTGTTGTACGTGTTGGAGGCCGAAGG
GGGGGGGGAGGGCGGGAGGGAGGGCAAGCGGGTGGTGTCCGGGACGAGAA
TGGAGGAGTTTCAGGCCCCATGGCGTATATCACTGACCCGCAGTACCGGG
AACATGACCTCTTTCTCCTCTTCGATCGCCTCATGCTGGACTTGGAGCCC
TTGTACTATGTGGAGGCGCCACCCTCCCCTCCGACCTCCGCCCCTTCCTC
CGCCGGCACCTCCACCACTTTTTCCTCCTCCTCGCCGGCCCACCTAG back to topprotein sequence of rna3198 >rna3198-protein ID=rna3198-protein|Name=rna3198|organism=Nannochloropsis gaditana|type=polypeptide|length=284bp
MVNSSRIINGALFLAFVVALTQGYHFPPTTRSLQRRCMRSVSRYHAAGNP
RARHSLLPMPSSISDFLDDTADVDKEPRPSPAAAVGVGDAAPKSDPNVQY
FVRCGRCNAAYAVGADLVRPEGGRVKCEVCGHTWFQASNRLQVLSPGYVL
KDYPEDLKEKVAENVRNNRHPLDTSAAKGAISVFVGNLPFSMAEADVQEM
FSEHGGVVSVTIVKDQLNRSKGFGFVEMADKEEGERAIAALDGREMDGRP
INVRLGTSKAQPRMRKERTQMKRAGGGGSGGSEE back to topmRNA from alignment at CM002460.1:979593..981349- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3198 ID=rna3198|Name=rna3198|organism=Nannochloropsis gaditana|type=mRNA|length=1757bp|location=Sequence derived from alignment at CM002460.1:979593..981349- (Nannochloropsis gaditana)
ATGGTCAACTCAAGTCGCATAATAAATGGGGCCCTCTTCCTCGCCTTTGT
GGTTGCTTTGACACAAGGATATCACTTCCCGCCCACGACACGAAGTTTGC
AGCGGAGGTGCATGAGAAGTGTGTCCCGGTACCACGCCGCAGGTGAGGGT
TCTCCAGACTCCTATCACGGCGGCATCTGCTGAAGTCACATTCATGGGAT
CCATTTTCACATCGGGAGGATGAATCCGCGTTAATATGACGGCTGCAGCG
AGTTGCCTGTTTGCTCCTGCAAATCGTTTTGCATTCTCTATCCCTCCACT
GCACCCCTACCAGGCACCCATCCTGATCCATCACGCTTCGGCCGCCTTTC
CTCCCCCCGATCCCCTCACCCACCCTCAGGAAACCCCCGAGCCCGCCACA
GCCTCCTTCCTATGCCTTCATCCATCTCCGACTTCCTGGACGACACGGCC
GACGTGGACAAGGAGCCCCGGCCTTCGCCCGCGGCCGCTGTGGGAGTGGG
TGACGCGGCCCCGAAAAGCGACCCAAACGTGCAATATTTCGTGCGGTGCG
GGCGGTGCAACGCTGCCTACGCCGTGGGCGCGGATTTGGTCCGTCCTGAG
GGGGGGAGGGTCAAGTGCGAGGTGTGTGGACACACCTGGTTCCAAGCTTC
CAACCGGCTGCAGGTCCTGAGCCCGGGCTATGTGCTCAAGGTGGGAGGGA
GGGAGGGAGGGAGGGAGGGAGGGAGGAATGGATTGAGGGTGCCGGAAATG
CTCGCACTGGGACAGTGTCTGGATGGAGGACTGGAAAGGGTCGAAGAAAT
AGAGAAAAGGAAGGGGGGGAGAAGTGTCGCGTCGGCGGAGGGCGTGAGCA
AGGCAGCGTCCTCCCTGGAGCTTGTGCCTTTTCCCCTCCCATGACCTTTC
CCGTCTCCTCTCACGCAGGACTACCCGGAGGATCTGAAGGAAAAAGTGGC
GGAGAACGTCCGGAACAACAGGCACCCCCTGGACACGAGCGCGGCCAAGG
GGGCCATCTCGGTCTTTGTCGGCAATTTGCCATTTTCGGTGCGTGCGACA
AGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGTGTCGAA
CCCAGGGTGATTCGCGCGGGTCGGCTTATGCTGCCCGCGCGCTGGGGAGG
GTGCTCCACTCTGACGGTGGGTTCCCTCGGGAGGAGGACCTGATTGTGCT
CGTCGGCAGCGCAAATTCCTCTAGCAGAAGCGTAACCTTCCTTATCTTTC
CTAATTCTTCCCCCTTTCAGATGGCGGAGGCGGACGTGCAGGAAATGTTC
AGCGAGCACGGGGGCGTGGTGTCTGTCACCATCGTCAAGGACCAGCTCAA
CCGCTCCAAGGGCTTCGGCTTTGTCGAGGTCTGTGACATGTGCCGGGGGG
AGGAAGGAATGGGGTGCTCTGTCCCCTTAGAGTACAGGGCCCTGGCCAGG
GCGGGGGATGGTGGAGATGGAAGAGAGTGATGAGCCGGGAAGAGTAGCGA
GTATAAGGTGGATGTAACTCCTGTGTTCCCTCAGCCTCCTTTTTTTCGTT
TCTTTCAATCCTCCCATGGCCCCGTGCGCACAGATGGCGGACAAGGAAGA
AGGCGAGCGCGCCATCGCCGCCTTGGACGGGAGGGAGATGGACGGGCGGC
CTATTAATGTGCGATTGGGGACCAGCAAAGCCCAACCCAGGATGCGCAAG
GAGCGGACGCAGATGAAAAGGGCGGGCGGAGGGGGATCGGGAGGCAGCGA
AGAGTGA back to topCoding sequence (CDS) from alignment at CM002460.1:979593..981349- >rna3198 ID=rna3198|Name=rna3198|organism=Nannochloropsis gaditana|type=CDS|length=4275bp|location=Sequence derived from alignment at CM002460.1:979593..981349- (Nannochloropsis gaditana)
ATGGCGGACAAGGAAGAAGGCGAGCGCGCCATCGCCGCCTTGGACGGGAG
GGAGATGGACGGGCGGCCTATTAATGTGCGATTGGGGACCAGCAAAGCCC
AACCCAGGATGCGCAAGGAGCGGACGCAGATGAAAAGGGCGGGCGGAGGG
GGATCGGGAGGCAGCGAAGAGTGAATGGCGGAGGCGGACGTGCAGGAAAT
GTTCAGCGAGCACGGGGGCGTGGTGTCTGTCACCATCGTCAAGGACCAGC
TCAACCGCTCCAAGGGCTTCGGCTTTGTCGAGGACTACCCGGAGGATCTG
AAGGAAAAAGTGGCGGAGAACGTCCGGAACAACAGGCACCCCCTGGACAC
GAGCGCGGCCAAGGGGGCCATCTCGGTCTTTGTCGGCAATTTGCCATTTT
CGGAAACCCCCGAGCCCGCCACAGCCTCCTTCCTATGCCTTCATCCATCT
CCGACTTCCTGGACGACACGGCCGACGTGGACAAGGAGCCCCGGCCTTCG
CCCGCGGCCGCTGTGGGAGTGGGTGACGCGGCCCCGAAAAGCGACCCAAA
CGTGCAATATTTCGTGCGGTGCGGGCGGTGCAACGCTGCCTACGCCGTGG
GCGCGGATTTGGTCCGTCCTGAGGGGGGGAGGGTCAAGTGCGAGGTGTGT
GGACACACCTGGTTCCAAGCTTCCAACCGGCTGCAGGTCCTGAGCCCGGG
CTATGTGCTCAAGATGGTCAACTCAAGTCGCATAATAAATGGGGCCCTCT
TCCTCGCCTTTGTGGTTGCTTTGACACAAGGATATCACTTCCCGCCCACG
ACACGAAGTTTGCAGCGGAGGTGCATGAGAAGTGTGTCCCGGTACCACGC
CGCAGATGGCGGACAAGGAAGAAGGCGAGCGCGCCATCGCCGCCTTGGAC
GGGAGGGAGATGGACGGGCGGCCTATTAATGTGCGATTGGGGACCAGCAA
AGCCCAACCCAGGATGCGCAAGGAGCGGACGCAGATGAAAAGGGCGGGCG
GAGGGGGATCGGGAGGCAGCGAAGAGTGAATGGCGGAGGCGGACGTGCAG
GAAATGTTCAGCGAGCACGGGGGCGTGGTGTCTGTCACCATCGTCAAGGA
CCAGCTCAACCGCTCCAAGGGCTTCGGCTTTGTCGAGGACTACCCGGAGG
ATCTGAAGGAAAAAGTGGCGGAGAACGTCCGGAACAACAGGCACCCCCTG
GACACGAGCGCGGCCAAGGGGGCCATCTCGGTCTTTGTCGGCAATTTGCC
ATTTTCGGAAACCCCCGAGCCCGCCACAGCCTCCTTCCTATGCCTTCATC
CATCTCCGACTTCCTGGACGACACGGCCGACGTGGACAAGGAGCCCCGGC
CTTCGCCCGCGGCCGCTGTGGGAGTGGGTGACGCGGCCCCGAAAAGCGAC
CCAAACGTGCAATATTTCGTGCGGTGCGGGCGGTGCAACGCTGCCTACGC
CGTGGGCGCGGATTTGGTCCGTCCTGAGGGGGGGAGGGTCAAGTGCGAGG
TGTGTGGACACACCTGGTTCCAAGCTTCCAACCGGCTGCAGGTCCTGAGC
CCGGGCTATGTGCTCAAGATGGTCAACTCAAGTCGCATAATAAATGGGGC
CCTCTTCCTCGCCTTTGTGGTTGCTTTGACACAAGGATATCACTTCCCGC
CCACGACACGAAGTTTGCAGCGGAGGTGCATGAGAAGTGTGTCCCGGTAC
CACGCCGCAGATGGCGGACAAGGAAGAAGGCGAGCGCGCCATCGCCGCCT
TGGACGGGAGGGAGATGGACGGGCGGCCTATTAATGTGCGATTGGGGACC
AGCAAAGCCCAACCCAGGATGCGCAAGGAGCGGACGCAGATGAAAAGGGC
GGGCGGAGGGGGATCGGGAGGCAGCGAAGAGTGAATGGCGGAGGCGGACG
TGCAGGAAATGTTCAGCGAGCACGGGGGCGTGGTGTCTGTCACCATCGTC
AAGGACCAGCTCAACCGCTCCAAGGGCTTCGGCTTTGTCGAGGACTACCC
GGAGGATCTGAAGGAAAAAGTGGCGGAGAACGTCCGGAACAACAGGCACC
CCCTGGACACGAGCGCGGCCAAGGGGGCCATCTCGGTCTTTGTCGGCAAT
TTGCCATTTTCGGAAACCCCCGAGCCCGCCACAGCCTCCTTCCTATGCCT
TCATCCATCTCCGACTTCCTGGACGACACGGCCGACGTGGACAAGGAGCC
CCGGCCTTCGCCCGCGGCCGCTGTGGGAGTGGGTGACGCGGCCCCGAAAA
GCGACCCAAACGTGCAATATTTCGTGCGGTGCGGGCGGTGCAACGCTGCC
TACGCCGTGGGCGCGGATTTGGTCCGTCCTGAGGGGGGGAGGGTCAAGTG
CGAGGTGTGTGGACACACCTGGTTCCAAGCTTCCAACCGGCTGCAGGTCC
TGAGCCCGGGCTATGTGCTCAAGATGGTCAACTCAAGTCGCATAATAAAT
GGGGCCCTCTTCCTCGCCTTTGTGGTTGCTTTGACACAAGGATATCACTT
CCCGCCCACGACACGAAGTTTGCAGCGGAGGTGCATGAGAAGTGTGTCCC
GGTACCACGCCGCAGATGGCGGACAAGGAAGAAGGCGAGCGCGCCATCGC
CGCCTTGGACGGGAGGGAGATGGACGGGCGGCCTATTAATGTGCGATTGG
GGACCAGCAAAGCCCAACCCAGGATGCGCAAGGAGCGGACGCAGATGAAA
AGGGCGGGCGGAGGGGGATCGGGAGGCAGCGAAGAGTGAATGGCGGAGGC
GGACGTGCAGGAAATGTTCAGCGAGCACGGGGGCGTGGTGTCTGTCACCA
TCGTCAAGGACCAGCTCAACCGCTCCAAGGGCTTCGGCTTTGTCGAGGAC
TACCCGGAGGATCTGAAGGAAAAAGTGGCGGAGAACGTCCGGAACAACAG
GCACCCCCTGGACACGAGCGCGGCCAAGGGGGCCATCTCGGTCTTTGTCG
GCAATTTGCCATTTTCGGAAACCCCCGAGCCCGCCACAGCCTCCTTCCTA
TGCCTTCATCCATCTCCGACTTCCTGGACGACACGGCCGACGTGGACAAG
GAGCCCCGGCCTTCGCCCGCGGCCGCTGTGGGAGTGGGTGACGCGGCCCC
GAAAAGCGACCCAAACGTGCAATATTTCGTGCGGTGCGGGCGGTGCAACG
CTGCCTACGCCGTGGGCGCGGATTTGGTCCGTCCTGAGGGGGGGAGGGTC
AAGTGCGAGGTGTGTGGACACACCTGGTTCCAAGCTTCCAACCGGCTGCA
GGTCCTGAGCCCGGGCTATGTGCTCAAGATGGTCAACTCAAGTCGCATAA
TAAATGGGGCCCTCTTCCTCGCCTTTGTGGTTGCTTTGACACAAGGATAT
CACTTCCCGCCCACGACACGAAGTTTGCAGCGGAGGTGCATGAGAAGTGT
GTCCCGGTACCACGCCGCAGATGGCGGACAAGGAAGAAGGCGAGCGCGCC
ATCGCCGCCTTGGACGGGAGGGAGATGGACGGGCGGCCTATTAATGTGCG
ATTGGGGACCAGCAAAGCCCAACCCAGGATGCGCAAGGAGCGGACGCAGA
TGAAAAGGGCGGGCGGAGGGGGATCGGGAGGCAGCGAAGAGTGAATGGCG
GAGGCGGACGTGCAGGAAATGTTCAGCGAGCACGGGGGCGTGGTGTCTGT
CACCATCGTCAAGGACCAGCTCAACCGCTCCAAGGGCTTCGGCTTTGTCG
AGGACTACCCGGAGGATCTGAAGGAAAAAGTGGCGGAGAACGTCCGGAAC
AACAGGCACCCCCTGGACACGAGCGCGGCCAAGGGGGCCATCTCGGTCTT
TGTCGGCAATTTGCCATTTTCGGAAACCCCCGAGCCCGCCACAGCCTCCT
TCCTATGCCTTCATCCATCTCCGACTTCCTGGACGACACGGCCGACGTGG
ACAAGGAGCCCCGGCCTTCGCCCGCGGCCGCTGTGGGAGTGGGTGACGCG
GCCCCGAAAAGCGACCCAAACGTGCAATATTTCGTGCGGTGCGGGCGGTG
CAACGCTGCCTACGCCGTGGGCGCGGATTTGGTCCGTCCTGAGGGGGGGA
GGGTCAAGTGCGAGGTGTGTGGACACACCTGGTTCCAAGCTTCCAACCGG
CTGCAGGTCCTGAGCCCGGGCTATGTGCTCAAGATGGTCAACTCAAGTCG
CATAATAAATGGGGCCCTCTTCCTCGCCTTTGTGGTTGCTTTGACACAAG
GATATCACTTCCCGCCCACGACACGAAGTTTGCAGCGGAGGTGCATGAGA
AGTGTGTCCCGGTACCACGCCGCAG back to top
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