|
|
Properties
| Property Name | Value |
|---|
| Product | putative mitochondrial aspartate-glutamate transporter |
| Orig transcript id | gnl|cribi|Naga_100099g22.8529.mrna |
| Orig protein id | gnl|cribi|Naga_100099g22.8529 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:966080..968362 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3192 ID=rna3192|Name=rna3192|organism=Nannochloropsis gaditana|type=mRNA|length=964bp
TACACTCGCTATATATTCAGGCATAACCTCGCACTCGCTTTGAAATTTAA
CGCCCGTCCTGACAGCAGGATTACGCACGGGGAGCCAGCGCCTGAGATAG
ACTCTATCGCTCGAAGTGGACGCTTCACGGCCTTCGGCGAGAGTTTCAGC
TCCAGCACCATAACGCATCTCTTACATGGCTTATGTGTCGAAATCGCACG
ACGAGGCATTGGAAGAATTGGCCATACGACTGGCTAGGGTAGAGGCTAAG
ATCTTCGGTCCTGGAGACGATAATATCCTCCACATTCGTGCCTCGTCTTC
TGAGGGAGGGAGCCCGGAAAGGCGAGCGTGCCCCATGGAGCTGTGGCAAA
GGGTACTCAAAGCCTCCAAATGCGTCGAGGAATATGCCCGCAGAATGGGT
GAAAAACCAGTTCTAAACGAGCTTGAAACGGAGCTTTTCAATGCGCCACA
CTCACTTTCCCGGAGTGCATTCCGAAGAAAGGGCTTCCCTCCTGCCTCGA
TAAATCAAGCAGCTGCGCCTCCTGACGGCCCCTCTGTTCCCCCTCCCTCC
AGTAATGTGCTGGTGGGAATACCGGAAAAGACCACACTGGTCCTCGCTAA
AGAAGAGGAGACGCGTCGAACGCTGGCGCTATTGTCAGAGATTGACGAGC
TGAAAGCCTTTATCTCCGGACCTTTTTTAGAAGGGGGGGGGCACAGGGAG
GAGGCAGCTTTGTACACGCAACTACAGCGCGTGGAGAGGGACTTCTGGGA
CGTGGAAGCCGTGGCTTTTGCCCTGACAAGGGAGATGGAGGAGGTCTTGA
CGGTGTACGACGAGGTTGTGGAGCGGCTTTCGGGCAAATGTGTAGAGTGG
GAAGGAGTCCTAGCGGCTCGGTGGAAGGCGAGAAAGAGGGGATTCGGAGC
CAGAAATAGAGAAAAAGACGGGGCCAAGGGCACCTTGTAAGCAATTTTTA
AAAAATAAGTCACC back to topprotein sequence of rna3192 >rna3192-protein ID=rna3192-protein|Name=rna3192|organism=Nannochloropsis gaditana|type=polypeptide|length=304bp
MSAVVAAPPASTEDVALEVKKAPKVPLAAKLVVGAVAGVVGTTCIFPIDM
VKTRLQSGNAQYTGPISAASSILKNEGVAGFYRGLGPNLVGVTPEKAIKL
AANDLIREALESPDGSLPLHKEMIAGAGAGLCQVVATNPMEIVKIRMQMQ
ALLPPAERQSTMEVVRGLGLRGMYQGTTATLSRDIPFSLIFFPLYANLKK
AFADPKTKENSIASLLGAGGLAGAMGSWAATPADVIKTRLQLAGGKEKYK
DMQTCFRMVLKEEGVSALFKGSVPRMCVVAPLFGIALLSFEMQKNYMIKS
GMLD back to topmRNA from alignment at CM002460.1:966080..968362- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3192 ID=rna3192|Name=rna3192|organism=Nannochloropsis gaditana|type=mRNA|length=2283bp|location=Sequence derived from alignment at CM002460.1:966080..968362- (Nannochloropsis gaditana)
ATGTCAGCGGTCGTCGCAGCTCCTCCCGCAAGCACTGAAGATGTTGCCCT
CGAAGTGAAAAAGGCGCCTAAGGTTAGTTTCCCCGGACACTCGGCGGGGT
ATTTGTGAGATCCCTTGATGCTGTCGCCCGATGTGCCCACATTCACTCCA
ATCTGTCCCACTCTCCTGTTGGACGTGTTCAGGTCCCTCTGGCGGCAAAG
CTGGTGGTGGGCGCAGTGGCTGGTGTAGTCGGGACCACCTGCATATTTCC
CATCGGTACGTCCTTGTCCATCGCAGAGCTGTAAGGGTCACTGTAATTGG
CTTTGCATGCGTATCGAGTGTTTTGCGGATATTTTGACATTGCTTGAGTC
CACATGCCGAGTCAGGTCAAGGCCAATCGTGCGGATGGAGGGAAGGCATG
GGTGCTATCTGGTGTATGGGATCACTTCCGACAACTCGCGCCATTAACCC
CGCTCATCTGCATCCCAACACTGCGCGCGCATCCACTGATTACAGACATG
GTGAAGACTCGACTGCAGAGTGGGAACGCCCAGTACACGGGGCCCATTTC
CGCAGCCTCCTCTATCCTCAAGAACGAGGGCGTCGCCGGCTTCTACAGGG
GTGCGTTTGGGTGTCTACGTGCTTCTCTCCGTCGTCTTCACCCTCTCACG
GGAGCGTCCTGAGCGCTCGTGTCTCCGTTCTCCTTCTCACCCTCCCCACC
GCCACTAATGCAGGGCTGGGTCCTAACCTTGTGGGAGTGACGCCCGAGAA
GGCGATCAAGTTGGCAGCCAACGACTTGATACGCGAGGCCTTGGAGTCGC
CGGATGGCTCCTTGCCTCTTCACAAAGAGATGATAGCAGGGGCCGGTAAA
GAGGGAGGGAGGGAGGGAGGGAGGGAGCGAGGGAGGGAGGGCACACGGCG
TGGAAGGGGCTGGCTCGTAGTGTCTTGGCACGTTCCCTTTGGGTGCGCAT
TCTACTGGCATGAGTCTGCGTTGTTTTCAAACACGGTTGGGATAGAAACT
CTAATGCCTTTCTACTGGTGTAATTTGAAGTGGGAGGAAATCCTGAACGA
AGAAGTCTGATGCGTTTCCCCCTCCCCTCCCTCCCTTTCGCCCTCTCATG
TCCTCCTCCTCGCTCACTCACTCCCTCCTTCCCTCCTTCAGGTGCGGGTC
TTTGCCAAGTGGTGGCCACCAACCCGATGGAAATCGTCAAAATTCGGATG
CAAATGCAAGCACTGCTTCCCCCCGCGGAGCGACAGAGCACTATGGAGGT
GGTGCGGGGGCTGGGGCTACGTGGGATGTACCAAGGCACTACGGCCACCC
TGTCCCGAGACATTCCCTTCAGCTTGATCTTCTTTCCGCTCTATGCGAAT
CTGAAGAAGGCGTTTGCGGACCCCAAGACCAAGGAGAACTCTATCGCGTC
CTTGCTGGGGGCGGGGGGGTTAGCAGGGGCCATGGGCTCCTGGGCGGCGA
CGCCGGCGGACGTGATCAAAACGCGACTCCAACTGGCGGGAGGGAAGGAG
AAATACAAGGACATGCAGACCTGCTTTAGAATGGTGTTGAAAGAGGAAGG
CGTGAGTGCTCTCTTCAAAGGGAGCGTGCCAAGGATGTGTGTGGTGGCCC
CTCTGTTCGGGATTGCCCTCTTGTCCTTCGAGATGCAAAAAAATTACATG
ATCAAGAGCGGCATGTTGGACTAAGCGGTGGGAATAACGGCATGCATGAA
GCCCCTTCTGGTCCTTGGGCCTTCCTCGTCTTCATCCCCTTGGCCGTCTT
CTTGCGTCCCGCGGGGCCGCAGGGGGCGATTGGGGGGAAGGGGAGGGCAT
TTTTGTGTGGGGAGACCGAGGATGCGTCCCGCTCGAGCGCAGGTTGAACG
GCTCCTTGGGTTTATTTTGTCTGGAATCCCCATCCCGCATGATTCGTGTG
CTTTTTAAGGAGTTTTGTCGGTGGGGGGCATGCAAACGAGGAGAAACATC
GATTCATGACAGTGGTCCTTTGCATAGAAAATGAAGGAGATTGGCTGATA
AATTTTGATAGGTTTAGAATTGTAATTAGGACGACCATCACCACGTCGAT
AAGCACAGGAAACTAGTGGTGTGTGAAAGTGCATTGCGCACGTGCTAATG
GCGGTGGACAGTTTATACTGAGCATTCCTGTAAGGCTCAATCACCTGGCC
TGTGAGCCTCTTCGTCCCTCCGCCGGGGAGAAAAAGTAAGGAAACGAATT
CATGCAAAGCAGTTGGCGTGACGAAGGGAGGGGACCGTGGGCGGGGACGA
AATGGGGAGAGGAAAGAAGTCAAGTACACGTAA back to topCoding sequence (CDS) from alignment at CM002460.1:966080..968362- >rna3192 ID=rna3192|Name=rna3192|organism=Nannochloropsis gaditana|type=CDS|length=4575bp|location=Sequence derived from alignment at CM002460.1:966080..968362- (Nannochloropsis gaditana)
GTGCGGGTCTTTGCCAAGTGGTGGCCACCAACCCGATGGAAATCGTCAAA
ATTCGGATGCAAATGCAAGCACTGCTTCCCCCCGCGGAGCGACAGAGCAC
TATGGAGGTGGTGCGGGGGCTGGGGCTACGTGGGATGTACCAAGGCACTA
CGGCCACCCTGTCCCGAGACATTCCCTTCAGCTTGATCTTCTTTCCGCTC
TATGCGAATCTGAAGAAGGCGTTTGCGGACCCCAAGACCAAGGAGAACTC
TATCGCGTCCTTGCTGGGGGCGGGGGGGTTAGCAGGGGCCATGGGCTCCT
GGGCGGCGACGCCGGCGGACGTGATCAAAACGCGACTCCAACTGGCGGGA
GGGAAGGAGAAATACAAGGACATGCAGACCTGCTTTAGAATGGTGTTGAA
AGAGGAAGGCGTGAGTGCTCTCTTCAAAGGGAGCGTGCCAAGGATGTGTG
TGGTGGCCCCTCTGTTCGGGATTGCCCTCTTGTCCTTCGAGATGCAAAAA
AATTACATGATCAAGAGCGGCATGTTGGACTAAGGCTGGGTCCTAACCTT
GTGGGAGTGACGCCCGAGAAGGCGATCAAGTTGGCAGCCAACGACTTGAT
ACGCGAGGCCTTGGAGTCGCCGGATGGCTCCTTGCCTCTTCACAAAGAGA
TGATAGCAGGGGCCGACATGGTGAAGACTCGACTGCAGAGTGGGAACGCC
CAGTACACGGGGCCCATTTCCGCAGCCTCCTCTATCCTCAAGAACGAGGG
CGTCGCCGGCTTCTACAGGGGTCCCTCTGGCGGCAAAGCTGGTGGTGGGC
GCAGTGGCTGGTGTAGTCGGGACCACCTGCATATTTCCCATCGATGTCAG
CGGTCGTCGCAGCTCCTCCCGCAAGCACTGAAGATGTTGCCCTCGAAGTG
AAAAAGGCGCCTAAGGTGCGGGTCTTTGCCAAGTGGTGGCCACCAACCCG
ATGGAAATCGTCAAAATTCGGATGCAAATGCAAGCACTGCTTCCCCCCGC
GGAGCGACAGAGCACTATGGAGGTGGTGCGGGGGCTGGGGCTACGTGGGA
TGTACCAAGGCACTACGGCCACCCTGTCCCGAGACATTCCCTTCAGCTTG
ATCTTCTTTCCGCTCTATGCGAATCTGAAGAAGGCGTTTGCGGACCCCAA
GACCAAGGAGAACTCTATCGCGTCCTTGCTGGGGGCGGGGGGGTTAGCAG
GGGCCATGGGCTCCTGGGCGGCGACGCCGGCGGACGTGATCAAAACGCGA
CTCCAACTGGCGGGAGGGAAGGAGAAATACAAGGACATGCAGACCTGCTT
TAGAATGGTGTTGAAAGAGGAAGGCGTGAGTGCTCTCTTCAAAGGGAGCG
TGCCAAGGATGTGTGTGGTGGCCCCTCTGTTCGGGATTGCCCTCTTGTCC
TTCGAGATGCAAAAAAATTACATGATCAAGAGCGGCATGTTGGACTAAGG
CTGGGTCCTAACCTTGTGGGAGTGACGCCCGAGAAGGCGATCAAGTTGGC
AGCCAACGACTTGATACGCGAGGCCTTGGAGTCGCCGGATGGCTCCTTGC
CTCTTCACAAAGAGATGATAGCAGGGGCCGACATGGTGAAGACTCGACTG
CAGAGTGGGAACGCCCAGTACACGGGGCCCATTTCCGCAGCCTCCTCTAT
CCTCAAGAACGAGGGCGTCGCCGGCTTCTACAGGGGTCCCTCTGGCGGCA
AAGCTGGTGGTGGGCGCAGTGGCTGGTGTAGTCGGGACCACCTGCATATT
TCCCATCGATGTCAGCGGTCGTCGCAGCTCCTCCCGCAAGCACTGAAGAT
GTTGCCCTCGAAGTGAAAAAGGCGCCTAAGGTGCGGGTCTTTGCCAAGTG
GTGGCCACCAACCCGATGGAAATCGTCAAAATTCGGATGCAAATGCAAGC
ACTGCTTCCCCCCGCGGAGCGACAGAGCACTATGGAGGTGGTGCGGGGGC
TGGGGCTACGTGGGATGTACCAAGGCACTACGGCCACCCTGTCCCGAGAC
ATTCCCTTCAGCTTGATCTTCTTTCCGCTCTATGCGAATCTGAAGAAGGC
GTTTGCGGACCCCAAGACCAAGGAGAACTCTATCGCGTCCTTGCTGGGGG
CGGGGGGGTTAGCAGGGGCCATGGGCTCCTGGGCGGCGACGCCGGCGGAC
GTGATCAAAACGCGACTCCAACTGGCGGGAGGGAAGGAGAAATACAAGGA
CATGCAGACCTGCTTTAGAATGGTGTTGAAAGAGGAAGGCGTGAGTGCTC
TCTTCAAAGGGAGCGTGCCAAGGATGTGTGTGGTGGCCCCTCTGTTCGGG
ATTGCCCTCTTGTCCTTCGAGATGCAAAAAAATTACATGATCAAGAGCGG
CATGTTGGACTAAGGCTGGGTCCTAACCTTGTGGGAGTGACGCCCGAGAA
GGCGATCAAGTTGGCAGCCAACGACTTGATACGCGAGGCCTTGGAGTCGC
CGGATGGCTCCTTGCCTCTTCACAAAGAGATGATAGCAGGGGCCGACATG
GTGAAGACTCGACTGCAGAGTGGGAACGCCCAGTACACGGGGCCCATTTC
CGCAGCCTCCTCTATCCTCAAGAACGAGGGCGTCGCCGGCTTCTACAGGG
GTCCCTCTGGCGGCAAAGCTGGTGGTGGGCGCAGTGGCTGGTGTAGTCGG
GACCACCTGCATATTTCCCATCGATGTCAGCGGTCGTCGCAGCTCCTCCC
GCAAGCACTGAAGATGTTGCCCTCGAAGTGAAAAAGGCGCCTAAGGTGCG
GGTCTTTGCCAAGTGGTGGCCACCAACCCGATGGAAATCGTCAAAATTCG
GATGCAAATGCAAGCACTGCTTCCCCCCGCGGAGCGACAGAGCACTATGG
AGGTGGTGCGGGGGCTGGGGCTACGTGGGATGTACCAAGGCACTACGGCC
ACCCTGTCCCGAGACATTCCCTTCAGCTTGATCTTCTTTCCGCTCTATGC
GAATCTGAAGAAGGCGTTTGCGGACCCCAAGACCAAGGAGAACTCTATCG
CGTCCTTGCTGGGGGCGGGGGGGTTAGCAGGGGCCATGGGCTCCTGGGCG
GCGACGCCGGCGGACGTGATCAAAACGCGACTCCAACTGGCGGGAGGGAA
GGAGAAATACAAGGACATGCAGACCTGCTTTAGAATGGTGTTGAAAGAGG
AAGGCGTGAGTGCTCTCTTCAAAGGGAGCGTGCCAAGGATGTGTGTGGTG
GCCCCTCTGTTCGGGATTGCCCTCTTGTCCTTCGAGATGCAAAAAAATTA
CATGATCAAGAGCGGCATGTTGGACTAAGGCTGGGTCCTAACCTTGTGGG
AGTGACGCCCGAGAAGGCGATCAAGTTGGCAGCCAACGACTTGATACGCG
AGGCCTTGGAGTCGCCGGATGGCTCCTTGCCTCTTCACAAAGAGATGATA
GCAGGGGCCGACATGGTGAAGACTCGACTGCAGAGTGGGAACGCCCAGTA
CACGGGGCCCATTTCCGCAGCCTCCTCTATCCTCAAGAACGAGGGCGTCG
CCGGCTTCTACAGGGGTCCCTCTGGCGGCAAAGCTGGTGGTGGGCGCAGT
GGCTGGTGTAGTCGGGACCACCTGCATATTTCCCATCGATGTCAGCGGTC
GTCGCAGCTCCTCCCGCAAGCACTGAAGATGTTGCCCTCGAAGTGAAAAA
GGCGCCTAAGGTGCGGGTCTTTGCCAAGTGGTGGCCACCAACCCGATGGA
AATCGTCAAAATTCGGATGCAAATGCAAGCACTGCTTCCCCCCGCGGAGC
GACAGAGCACTATGGAGGTGGTGCGGGGGCTGGGGCTACGTGGGATGTAC
CAAGGCACTACGGCCACCCTGTCCCGAGACATTCCCTTCAGCTTGATCTT
CTTTCCGCTCTATGCGAATCTGAAGAAGGCGTTTGCGGACCCCAAGACCA
AGGAGAACTCTATCGCGTCCTTGCTGGGGGCGGGGGGGTTAGCAGGGGCC
ATGGGCTCCTGGGCGGCGACGCCGGCGGACGTGATCAAAACGCGACTCCA
ACTGGCGGGAGGGAAGGAGAAATACAAGGACATGCAGACCTGCTTTAGAA
TGGTGTTGAAAGAGGAAGGCGTGAGTGCTCTCTTCAAAGGGAGCGTGCCA
AGGATGTGTGTGGTGGCCCCTCTGTTCGGGATTGCCCTCTTGTCCTTCGA
GATGCAAAAAAATTACATGATCAAGAGCGGCATGTTGGACTAAGGCTGGG
TCCTAACCTTGTGGGAGTGACGCCCGAGAAGGCGATCAAGTTGGCAGCCA
ACGACTTGATACGCGAGGCCTTGGAGTCGCCGGATGGCTCCTTGCCTCTT
CACAAAGAGATGATAGCAGGGGCCGACATGGTGAAGACTCGACTGCAGAG
TGGGAACGCCCAGTACACGGGGCCCATTTCCGCAGCCTCCTCTATCCTCA
AGAACGAGGGCGTCGCCGGCTTCTACAGGGGTCCCTCTGGCGGCAAAGCT
GGTGGTGGGCGCAGTGGCTGGTGTAGTCGGGACCACCTGCATATTTCCCA
TCGATGTCAGCGGTCGTCGCAGCTCCTCCCGCAAGCACTGAAGATGTTGC
CCTCGAAGTGAAAAAGGCGCCTAAG back to top
|