EWM27493.1, cds3184 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27493.1 vs. NCBI_GenBank
Match: gi|585109757|gb|EWM27493.1| (putative mitochondrial aspartate-glutamate transporter [Nannochloropsis gaditana]) HSP 1 Score: 614.379 bits (1583), Expect = 0.000e+0 Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 0
Query: 1 MSAVVAAPPASTEDVALEVKKAPKVPLAAKLVVGAVAGVVGTTCIFPIDMVKTRLQSGNAQYTGPISAASSILKNEGVAGFYRGLGPNLVGVTPEKAIKLAANDLIREALESPDGSLPLHKEMIAGAGAGLCQVVATNPMEIVKIRMQMQALLPPAERQSTMEVVRGLGLRGMYQGTTATLSRDIPFSLIFFPLYANLKKAFADPKTKENSIASLLGAGGLAGAMGSWAATPADVIKTRLQLAGGKEKYKDMQTCFRMVLKEEGVSALFKGSVPRMCVVAPLFGIALLSFEMQKNYMIKSGMLD 304
MSAVVAAPPASTEDVALEVKKAPKVPLAAKLVVGAVAGVVGTTCIFPIDMVKTRLQSGNAQYTGPISAASSILKNEGVAGFYRGLGPNLVGVTPEKAIKLAANDLIREALESPDGSLPLHKEMIAGAGAGLCQVVATNPMEIVKIRMQMQALLPPAERQSTMEVVRGLGLRGMYQGTTATLSRDIPFSLIFFPLYANLKKAFADPKTKENSIASLLGAGGLAGAMGSWAATPADVIKTRLQLAGGKEKYKDMQTCFRMVLKEEGVSALFKGSVPRMCVVAPLFGIALLSFEMQKNYMIKSGMLD
Sbjct: 1 MSAVVAAPPASTEDVALEVKKAPKVPLAAKLVVGAVAGVVGTTCIFPIDMVKTRLQSGNAQYTGPISAASSILKNEGVAGFYRGLGPNLVGVTPEKAIKLAANDLIREALESPDGSLPLHKEMIAGAGAGLCQVVATNPMEIVKIRMQMQALLPPAERQSTMEVVRGLGLRGMYQGTTATLSRDIPFSLIFFPLYANLKKAFADPKTKENSIASLLGAGGLAGAMGSWAATPADVIKTRLQLAGGKEKYKDMQTCFRMVLKEEGVSALFKGSVPRMCVVAPLFGIALLSFEMQKNYMIKSGMLD 304
BLAST of EWM27493.1 vs. NCBI_GenBank
Match: gi|673016922|ref|XP_008862422.1| (hypothetical protein H310_01158 [Aphanomyces invadans] >gi|574481625|gb|ETW08617.1| hypothetical protein H310_01158 [Aphanomyces invadans]) HSP 1 Score: 295.049 bits (754), Expect = 3.340e-96 Identity = 158/297 (53.20%), Postives = 203/297 (68.35%), Query Frame = 0
Query: 3 AVVAAPPASTEDVALEVKKAPKVPLAAKLVVGAVAGVVGTTCIFPIDMVKTRLQSGNAQYTGPISAASSILKNEGVAGFYRGLGPNLVGVTPEKAIKLAANDLIREALESPDGS--LPLHKEMIAGAGAGLCQVVATNPMEIVKIRMQMQALLPPAERQSTMEVVRGLGLRGMYQGTTATLSRDIPFSLIFFPLYANLKKAFADPKTKENSIASLLGAGGLAGAMGSWAATPADVIKTRLQLAGGKEKYKDMQTCFRMVLKEEGVSALFKGSVPRMCVVAPLFGIALLSFEMQKNYM 297
A APP V K+PL KLVVG +AG+ G + FPID+VKT LQS + +TGPI ++L +GV G + GL P LVGV PEKAIKLA ND +RE L++ DGS LPL+K++IAG GAG+CQV ATNP+EIVKIRMQ Q LP AER + ++VV+ LGLRG+Y+GT + L RDIP+++IFFP+Y+ ++ D K S+ S++ AG +AGA + TPADVIKT+ Q+ G YK CF+ V E GV+ALFKG+ PRM V APLFGI LL+FE+QK YM
Sbjct: 6 ATFTAPPVMGTPVPPAPAAKKKIPLLGKLVVGGLAGIFGVSVTFPIDIVKTNLQS-STTFTGPIHCFRTLLARDGVRGLFHGLPPTLVGVIPEKAIKLAVNDFLREILDT-DGSGVLPLYKQVIAGGGAGMCQVAATNPLEIVKIRMQTQNRLPAAERMTAIQVVQDLGLRGLYKGTASCLLRDIPYAIIFFPMYSTIRDLGTD-KDGHISMPSVVLAGSVAGATAAALVTPADVIKTKQQMRGA--TYKGTIDCFQQVFAEGGVAALFKGAGPRMMVQAPLFGITLLAFEVQKAYM 297
BLAST of EWM27493.1 vs. NCBI_GenBank
Match: gi|855306073|ref|XP_012895634.1| (uncharacterized protein [Blastocystis hominis] >gi|300121205|emb|CBK21586.2| unnamed protein product [Blastocystis hominis]) HSP 1 Score: 293.508 bits (750), Expect = 1.024e-95 Identity = 152/286 (53.15%), Postives = 197/286 (68.88%), Query Frame = 0
Query: 18 EVKKAPKVPLAAKLVVGAVAGVVGTTCIFPIDMVKTRLQ---SGNAQYTGPISAASSILKNEGVAGFYRGLGPNLVGVTPEKAIKLAANDLIREALESPDGSLPLHKEMIAGAGAGLCQVVATNPMEIVKIRMQMQALLPPAERQSTMEVVRGLGLRGMYQGTTATLSRDIPFSLIFFPLYANLKKAFADPKTKENSIASLLGAGGLAGAMGSWAATPADVIKTRLQLAGGKE---KYKDMQTCFRMVLKEEGVSALFKGSVPRMCVVAPLFGIALLSFEMQKNYM 297
EVKK VP KLVVG +AG+VGT+ ++P+DMVKTRLQ +G +Y GP +I K EG G YRG+ NL+GVTPEKAIKLA ND +REA E +G++ + ++AGA AG CQV+ATNPMEI KIRMQ+QA LPP +R + V R LGLRGMY+G+T TL RD+P+S+IFFPL A+++ A +D K ++ LL AG +AG + TP DVIKTR+Q G + K+ DM F + K EG+ L+KG+VPRMCV APLF IA +FE+QK Y+
Sbjct: 5 EVKK---VPFLQKLVVGGIAGIVGTSIVYPLDMVKTRLQRQTTGVLKYKGPWDCFKTICKEEGPKGLYRGILANLIGVTPEKAIKLAVNDFVREATEDENGNVAWYNGILAGASAGFCQVIATNPMEITKIRMQVQATLPPEQRTGLLAVCRDLGLRGMYKGSTITLLRDVPYSMIFFPLNASIQIALSD-KNGNMTLGGLLTAGMVAGCFAAGLMTPMDVIKTRVQAEKGNKVEVKFFDM---FVKIFKTEGLKGLYKGAVPRMCVQAPLFSIACTAFELQKRYL 283
BLAST of EWM27493.1 vs. NCBI_GenBank
Match: gi|929770336|ref|XP_014160101.1| (hypothetical protein SARC_01636 [Sphaeroforma arctica JP610] >gi|906957947|gb|KNC86199.1| hypothetical protein SARC_01636 [Sphaeroforma arctica JP610]) HSP 1 Score: 293.508 bits (750), Expect = 1.408e-95 Identity = 148/284 (52.11%), Postives = 194/284 (68.31%), Query Frame = 0
Query: 22 APKVPLAAKLVVGAVAGVVGTTCIFPIDMVKTRLQ-------SGNAQYTGPISAASSILKNEGVAGFYRGLGPNLVGVTPEKAIKLAANDLIREALESP-DGSLPLHKEMIAGAGAGLCQVVATNPMEIVKIRMQMQALLPPAERQSTMEVVRGLGLRGMYQGTTATLSRDIPFSLIFFPLYANLKKAFADPKTKENSIASLLGAGGLAGAMGSWAATPADVIKTRLQLAGGKEKYKDMQTCFRMVLKEEGVSALFKGSVPRMCVVAPLFGIALLSFEMQKNYM 297
AP +P+ KL VGA+AGVVGT IFP+D+VKTRLQ +G YTG + A +I+ EG Y+GL NL+GV PEKAIKL+ ND +RE L P G + + ++IAGA AG QV ATNPMEIVK+RMQ+Q + P +R T++VV+ LG++G+Y+G T RD+P+S++FFPLYA L+ FAD + I ++ AG +AGA+ ++A TPAD IKTR Q G YK + CF+ +K EGV ALFKGSVPRM V PLFG+ALL+FEMQK Y+
Sbjct: 16 APHIPMTQKLAVGALAGVVGTCFIFPVDVVKTRLQAQKPDVKTGKLPYTGIVHAFKTIVGKEGFRSLYKGLTSNLIGVMPEKAIKLSVNDGVRELLTDPVTGKISISNQIIAGASAGFFQVSATNPMEIVKLRMQLQNMKPVEQRLGTIQVVKNLGVKGLYKGILVTWMRDVPYSIVFFPLYATLRDKFADERGVAG-IPQIIMAGNIAGAVAAFACTPADTIKTRFQSEG--SSYKSIGDCFKQTVKNEGVKALFKGSVPRMLVTGPLFGVALLAFEMQKRYI 296
BLAST of EWM27493.1 vs. NCBI_GenBank
Match: gi|698777380|ref|XP_009821734.1| (hypothetical protein H257_00659 [Aphanomyces astaci] >gi|574123859|gb|ETV89334.1| hypothetical protein H257_00659 [Aphanomyces astaci]) HSP 1 Score: 293.123 bits (749), Expect = 1.807e-95 Identity = 162/290 (55.86%), Postives = 207/290 (71.38%), Query Frame = 0
Query: 9 PASTEDVALEVKKAPKVPLAAKLVVGAVAGVVGTTCIFPIDMVKTRLQSGNAQYTGPISAASSILKNEGVAGFYRGLGPNLVGVTPEKAIKLAANDLIREALESP-DGSLPLHKEMIAGAGAGLCQVVATNPMEIVKIRMQMQALLPPAERQSTMEVVRGLGLRGMYQGTTATLSRDIPFSLIFFPLYANLKKAFADPKTKENSIASLLGAGGLAGAMGSWAATPADVIKTRLQLAGGKEKYKDMQTCFRMVLKEEGVSALFKGSVPRMCVVAPLFGIALLSFEMQKNYM 297
PA+ E A KK K+PLAAKLVVG AG+ G + FPID+VKT LQS +A +T P+ +++ +G G +RGL P LVGV PEKAIKLA ND +RE L++ G LPL+K+++AG GAGLCQVVATNP+EIVKIR+Q Q LP AERQS +VV+ LGLRG+Y+GTTA L RDIP+++IFFP+YA ++ D K S+AS++ AG AGA + TPADVIKT+ Q+ G +YK CF+ V+ GV+ALFKG+ PRM V APLFGI LL+FE+QK YM
Sbjct: 11 PAAVERKAAASKK--KIPLAAKLVVGGFAGIFGVSVTFPIDIVKTNLQSSSA-FTSPLHCFRTLVAQDGFRGLFRGLPPTLVGVIPEKAIKLAVNDYLRETLDTEGTGVLPLYKQVLAGGGAGLCQVVATNPLEIVKIRLQTQNHLPAAERQSATQVVQELGLRGLYKGTTACLLRDIPYAVIFFPMYATIRDLGTD-KDGHVSMASVVFAGCTAGATAAGFVTPADVIKTKRQMRGA--RYKGTIDCFQQVVASGGVAALFKGAGPRMMVQAPLFGITLLAFEVQKAYM 294
BLAST of EWM27493.1 vs. NCBI_GenBank
Match: gi|669148108|ref|XP_008609616.1| (hypothetical protein SDRG_05666 [Saprolegnia diclina VS20] >gi|530738593|gb|EQC36835.1| hypothetical protein SDRG_05666 [Saprolegnia diclina VS20]) HSP 1 Score: 290.812 bits (743), Expect = 1.216e-94 Identity = 161/280 (57.50%), Postives = 198/280 (70.71%), Query Frame = 0
Query: 24 KVPLAAKLVVGAVAGVVGTTCIFPIDMVKTRLQSGNAQYTGPISAASSILKNEGVAGFYRGLGPNLVGVTPEKAIKLAANDLIREALESPD-GSLPLHKEMIAGAGAGLCQVVATNPMEIVKIRMQMQALLPPAERQSTMEVVRGLGLRGMYQGTTATLSRDIPFSLIFFPLYANLKKAFADPKTKENSIASLL---GAGGLAGAMGSWAATPADVIKTRLQLAGGKEKYKDMQTCFRMVLKEEGVSALFKGSVPRMCVVAPLFGIALLSFEMQKNYMIK 299
K+PL KL VG AGV+G + FPID+VKT LQS + +TGP+ ++L +GV G +RGL P LVGV PEKAIKLA ND +RE L+ D G LPLHK+++AGAGAG CQV+ATNPMEIVKIR+Q Q LP AER++ M VV+ LGLRG+Y+GT+A L RDIP++++FFP YA L+ A AD E+ AS+L AG AGA + ATPADVIKT+ Q+ G YK CF+ V GV ALFKG VPRM V APLFGI LL+FE+QK YM K
Sbjct: 22 KIPLVGKLAVGGFAGVIGVSATFPIDIVKTNLQS-STNFTGPVHCFKTLLARDGVRGLFRGLPPTLVGVIPEKAIKLAVNDYLREVLDPNDTGVLPLHKQVLAGAGAGFCQVIATNPMEIVKIRIQTQDRLPLAERKTAMGVVKDLGLRGLYKGTSACLLRDIPYAIVFFPTYATLRDAAAD----ESGHASMLAIVAAGCAAGAGAAAIATPADVIKTKRQMIGA--NYKGTIDCFQQVFAAGGVGALFKGVVPRMMVQAPLFGITLLAFEVQKAYMEK 294
BLAST of EWM27493.1 vs. NCBI_GenBank
Match: gi|1183358066|gb|ORX85571.1| (mitochondrial carrier [Basidiobolus meristosporus CBS 931.73]) HSP 1 Score: 288.115 bits (736), Expect = 2.837e-93 Identity = 159/307 (51.79%), Postives = 204/307 (66.45%), Query Frame = 0
Query: 5 VAAPPASTEDVALEVKKAPKVPLAAKLVVGAVAGVVGTTCIFPIDMVKTRLQ------SGNAQYTGPISAASSILKNEGVAGFYRGLGPNLVGVTPEKAIKLAANDLIREALESPDG----SLPLHKEMIAGAGAGLCQVVATNPMEIVKIRMQMQA--LLPPAERQSTMEVVRGLGLRGMYQGTTATLSRDIPFSLIFFPLYANLKKAFADPKTKENSIASLLGAGGLAGAMGSWAATPADVIKTRLQLA--GGKEKYKDMQTCFRMVLKEEGVSALFKGSVPRMCVVAPLFGIALLSFEMQKNYM 297
V A S VAL +K+ L KLV GA+AG+VGT I+P+DMVKTRLQ SGN +Y G + +ILK EG G YRGL PNLVG+TPEKAIKLA ND RE L + LP+H M+AGA AG CQV+ATNPMEIVKI+MQ+ L P R + ++VVR LGL+G+Y+GT ATL RD+PFS++FFP +A LK AD S ++ G+G +AG + S A TPADV+KTRLQ+A G+ Y+ CF+ +++ EG SALFKG VPR +V+PLFG ALL++E Q+ Y+
Sbjct: 3 VTAESVSLPPVALSEEKSGTRKLVLKLVNGAIAGIVGTLIIYPLDMVKTRLQNQKMDASGNLRYKGGVHCFKTILKTEGARGLYRGLVPNLVGITPEKAIKLAVNDYAREYLARENQVDPEHLPIHLGMVAGATAGFCQVIATNPMEIVKIQMQVAGTELKPGQPRPTALQVVRKLGLKGVYKGTPATLLRDVPFSILFFPSHAYLKTLCAD-SNGNVSFPAVFGSGIVAGVIASGAVTPADVVKTRLQVAPKPGEPVYRGFAHCFKEIVRNEGPSALFKGIVPRCMIVSPLFGFALLTYEAQQRYL 308
BLAST of EWM27493.1 vs. NCBI_GenBank
Match: gi|470515529|ref|XP_004352934.1| (citrin, putative [Acanthamoeba castellanii str. Neff] >gi|440802477|gb|ELR23406.1| citrin, putative [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 286.189 bits (731), Expect = 1.517e-92 Identity = 159/298 (53.36%), Postives = 201/298 (67.45%), Query Frame = 0
Query: 20 KKAPKVPLAAKLVVGAVAGVVGTTCIFPIDMVKTRLQ------SGNAQYTGPISAASSILKNEGVAGFYRGLGPNLVGVTPEKAIKLAANDLIREALESPDGSLPLHKEMIAGAGAGLCQVVATNPMEI-------------VKIRMQMQALLPPAERQSTMEVVRGLGLRGMYQGTTATLSRDIPFSLIFFPLYANLKKAFADPKTKENSIASLLGAGGLAGAMGSWAATPADVIKTRLQLAGGKEKYKDMQTCFRMVLKEEGVSALFKGSVPRMCVVAPLFGIALLSFEMQKNYMI 298
K +VPL AKLVVGA+AGV+GTTCIFPIDMVKTRLQ SG Y G + I+ EG G YRGLGPNL+GVTPEKA+KLA N+ +REALE DGS+ L E++AG GAG CQV+ATNPMEI VKIRMQ+Q LPP R+ ++V+ LG+RG+Y+GT TL RD+PFS IFFP YANLK F+D + L +G AGA + TPADV+KTR+Q+ +Y + C VL+EEG++A +KG VPRM V AP+FGIAL++FE+QK +++
Sbjct: 11 HKQQRVPLPAKLVVGAIAGVIGTTCIFPIDMVKTRLQNQKVGPSGERLYKGALDCFRQIVSKEGTRGLYRGLGPNLIGVTPEKALKLAVNERLREALEEEDGSITLPHEIMAGGGAGFCQVIATNPMEIGMSTDLGPTPLTPVKIRMQVQGTLPPENRKPAAQIVKELGIRGLYKGTPVTLLRDVPFSFIFFPAYANLKAIFSD-ADGNIGLVRLFLSGAFAGATAAGLVTPADVVKTRVQVE--NSRYTSIPQCAATVLREEGIAAFWKGVVPRMAVQAPMFGIALMAFELQKKFIL 305
BLAST of EWM27493.1 vs. NCBI_GenBank
Match: gi|1173951174|gb|OQR99087.1| (Mitochondrial Carrier (MC) Family [Achlya hypogyna]) HSP 1 Score: 285.034 bits (728), Expect = 2.015e-92 Identity = 157/278 (56.47%), Postives = 199/278 (71.58%), Query Frame = 0
Query: 24 KVPLAAKLVVGAVAGVVGTTCIFPIDMVKTRLQSGNAQYTGPISAASSILKNEGVAGFYRGLGPNLVGVTPEKAIKLAANDLIREALESPD-GSLPLHKEMIAGAGAGLCQVVATNPMEIVKIRMQMQALLPPAERQSTMEVVRGLGLRGMYQGTTATLSRDIPFSLIFFPLYANLKKAFADPKTKENSIASLLGAGGLAGAMGSWAATPADVIKTRLQLAGGKEKYKDMQTCFRMVLKEEGVSALFKGSVPRMCVVAPLFGIALLSFEMQKNYMIKS 300
K+PL KL VG AGV+G + FPID+VKT LQS + ++TGP+ ++L +GV G YRGL P LVGV PEKAIKLA ND +RE L+ D G LPLHK+++AGAGAG CQV+ATNPMEIVKIR+Q Q LP AER++ MEV + LG+RG+Y+GT+A L RDIP++++FFP YA L+ A AD + +++GAG +AGA + ATPADVIKT+ Q+ G Y CF+ V E GV ALFKG VPRM V APLFGI LL+FE+QK +M K
Sbjct: 21 KIPLLGKLAVGGFAGVIGVSATFPIDIVKTNLQS-STRFTGPVHCFKTLLARDGVRGLYRGLPPTLVGVIPEKAIKLAVNDYLREVLDPEDTGVLPLHKQVLAGAGAGFCQVIATNPMEIVKIRIQTQDRLPVAERKTAMEVAKDLGIRGLYKGTSACLLRDIPYAIVFFPTYATLRDAAAD-ANGHAPVVAIVGAGCVAGAAAAAIATPADVIKTKRQMVGA--TYTGTIDCFQKVFAEGGVGALFKGVVPRMMVQAPLFGITLLAFEVQKAFMEKQ 294
BLAST of EWM27493.1 vs. NCBI_GenBank
Match: gi|1183363423|gb|ORX90212.1| (mitochondrial carrier [Basidiobolus meristosporus CBS 931.73]) HSP 1 Score: 275.018 bits (702), Expect = 1.737e-88 Identity = 151/284 (53.17%), Postives = 194/284 (68.31%), Query Frame = 0
Query: 30 KLVVGAVAGVVGTTCIFPIDMVKTRLQS------GNAQYTGPISAASSILKNEGVAGFYRGLGPNLVGVTPEKAIKLAANDLIREAL-----ESPDGSLPLHKEMIAGAGAGLCQVVATNPMEIVKIRMQMQA--LLPPAERQSTMEVVRGLGLRGMYQGTTATLSRDIPFSLIFFPLYANLKKAFADPKTKEN-SIASLLGAGGLAGAMGSWAATPADVIKTRLQLA--GGKEKYKDMQTCFRMVLKEEGVSALFKGSVPRMCVVAPLFGIALLSFEMQKNYM 297
KLV GA+AGVVGT I+P+DMVKTRLQS G +Y G + +I++ EG G YRGL PNL+G+TPEKAIKLA ND RE L PD LP+H M+AGA AG CQV+ATNPMEIVKI+MQ+ L P R + ++VV+ LGLRG+Y+GT ATL RD+PFS++FFP +A LK AD T N S ++ +G +AG S A TPADVIKTRLQ+A G+ ++ CF+ +++ EG SALFKG VPR +V+PLFG ALL++E Q+ Y+
Sbjct: 2 KLVNGAIAGVVGTLIIYPLDMVKTRLQSQKADAFGKLRYQGGVHCFKTIVQAEGARGLYRGLVPNLIGITPEKAIKLAVNDYAREYLAKQSHTDPD-HLPIHLGMMAGATAGFCQVIATNPMEIVKIQMQVAGADLKPGQPRPTALQVVQRLGLRGVYKGTPATLLRDVPFSVLFFPSHAYLKSVCAD--TNGNVSFQAVFASGIVAGVFASGAVTPADVIKTRLQMAPKPGEPVFRGFAHCFKEIVRNEGPSALFKGIVPRCMIVSPLFGFALLTYEAQQRYL 282 The following BLAST results are available for this feature:
BLAST of EWM27493.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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