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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100099g19.8542.mrna |
| Orig protein id | gnl|cribi|Naga_100099g19.8542 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:962703..964992 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3190 ID=rna3190|Name=rna3190|organism=Nannochloropsis gaditana|type=mRNA|length=1185bp
CTGATTATGGCATGAAAGTGGTGTTTGTTTGGGTGTATGCTGTAGGATTG
TTGGCGGACGGGCATATTTTGTCGTGCGTCTGGAGTTGAATGTTTTGAAT
GACAGAATGACGGACAGGATTGTGGTGAATTTTGCTTGAGAGTTACTGCT
CACCACGTTTTCTTCAGTCGACCCTCTCCCCCTGTGTACTGTAAGTTTTC
AATTACACTGACATCTCATTCACCTTATGCCCACTATCACCTGCTTTATA
AAATTTATGGCATACAGTTTTGCAGTAGCATGGGGGCCTACAAATTTTTG
GAAGAGCTTTGGCGCAAGAAGCAGGCAGACCTGCTTCGTTTCCTGCTGCG
TGTGCGTGCTTGGGAGTACCGCCAACTGCCTAAAATCTACCGCATGAACC
GCCCTACTCGCACAGACAAAGCCCACCGTCTGGGCTACAAGGCCAAGCAG
GGTTTTGTCGTCTATCGTGTAGCTGTACGACGGGGTGGACGCAAACGCCC
CAACCCCAAGGGGATTGTGTACGGAAAGCCCAAAAACCAGGGGATTAATC
AGCTCAAGTGGGTCCGCAATTTGAAGAGTAAGGCAGAGGAGCGGGCAGGC
CGCAAGCTAGGCGGACTTCGCGTGCTGAATTCGTACTGGGTAAATCAAGA
CGCCACGTACAAGTACTACGAGGTCATCCTGGTGGACCCGCAGCACAAGG
CTATCCGCCGGGATGCTCGGGTGAATTGGATTGTCAACCCCACACACAAG
CACCGTGAGCTCCGAGGCCTGACTTCTTCCGGCCGGTCTTCCCGAGGACT
ACGCAAACGTGGTCACCGCGCGCACAACATCATCGGTTCCTCCGCCTACG
GGTCCTGGAAACGCCGCAACACTATCTCCCTCAAGAGGTACCGTTAAACC
AAGGGGGGAAATCGAGGCGATGGTCAAACTGCTGGTATGCGTTGTGTGTT
TTTTCTTTGGTGGTTGGCTGGTGGAGCGCTCTTCCTCGGAATGCGAGCCG
CAGGAGGCGACGCGTCGGGAAACTTTCCTGCAGTGTCGATGGGTGGTTGC
CGGGTCGTCGATGGCAAATTGATGCTTGGTTCTGCCTTGTGTCGAAACGT
ACCAGGGAGAGACGGGAAACTACCTACCGCTGAAAGCGTGACGGAGAGGG
ATGCAAAAGTAAAAAGCGACACGCGTGATCATGTT back to topprotein sequence of rna3190 >rna3190-protein ID=rna3190-protein|Name=rna3190|organism=Nannochloropsis gaditana|type=polypeptide|length=530bp
MIEILPVSSREELKEFLSAKPKAILGFHAYWLRGSSALVELVLHQAAAAL
TAPVPTSITSKEERENQDVIVTAIEEVVLGLLDVGLHEDLAFEADVGMLP
CFNFYRDGRLVDGIRADGNYGHGNKLGNGRKGAAWMIQRCLAFVTTMEED
VGYIDVSRGDTPSLSATQLLSASTAPRSFYLVNAIPPGEPLNLFIAGDRS
KVGKSSVCLALLGSLLRLGFAPGDLAYIKPATQCEAPQLVTAWCDSVGIA
NRGIGPVVFYKGFTREFLKGNAGTSADLLREACEGVRSVGTGKKIVLVDG
VGYPAVGSICGISNADIARALGACPVLLVGRSGVGDAVDSFNLHATYFRH
QGVKVLGAVFNRLPLEGFYSLAACREAVGGYFAKFQSQSKAYGFLPEVAS
LGKVREEMEAEHAAGQKPGEEKAKRMEMVQVLVEAFREHVDLEGLLQDAW
EYRLEEREGRRLSGGKATVGGRRRGREVPSDVDFAESGQGKAVQEGGGGG
GGICAFVPGQKRKSRGEIEQEAKKQGAKGG back to topmRNA from alignment at CM002460.1:962703..964992+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3190 ID=rna3190|Name=rna3190|organism=Nannochloropsis gaditana|type=mRNA|length=2290bp|location=Sequence derived from alignment at CM002460.1:962703..964992+ (Nannochloropsis gaditana)
CAAGGTGCCTTTTCATGGTTTCACAGCGGCTTCCTGTCACTCCATTAATT
ACGCAGGTGTCCTTTCCGCTAAACACACACCCTGAGTCGCGTCTGGTCGC
CTTTGGCCTGCCAGGGGGTACCAGAGCAGGAAAATCGCGGCACTGCATAC
ACTCACAGGAAGTGATGCCCTCCACTTGCCATTATCTCTTCTGCCCTCAC
CTCTCTAAATCATGATTGAAATCCTACCTGTGAGCTCTCGTGAAGAGCTA
AAGGAATTTTTGTCGGCCAAACCCAAGGCCATACTGGGATTTCATGCTTA
TTGGCTTCGAGGTTCTTCCGCTCTTGTTGAACTCGTCCTTCACCAGGCGG
CTGCGGCGTTAACTGCTCCCGTGCCCACATCTATCACgtcaaaggaggaa
agagaaaatcAGGATGTGATAGTGACAGCGATTGAGGAGGTAGTCCTGGG
GCTTTTGGACGTAGGGCTGCACGAAGACTTGGCATTCGAGGCCGATGTGG
GCATGCTGCCTTGCTTCAACTTCTACCGCGACGGCCGATTGGTCGATGGG
ATCCGGGCGGATGGCAACTACGGGCATGGAAATAAGTTAGgaaacgggag
gaagggggcggctTGGATGATCCAGCGGTGTCTCGCCTTTGTAACcacca
tggaggaggacgtgggatACATCGACGTGAGTAGAGGGGATACCCCTTCA
CTGTCCGCCACGCAGCTCCTTTCAGCCTCCACGGCACCCCGATCTTTCTA
CCTGGTGaacgccatcccccccggcGAACCCCTCAATCTCTTTATCGCAG
GCGACCGTTCCAAAGTCGGCAAGTCCAGCGTCTGCCTGGCGCTTCtcggc
tccctccttcgcctggGTTTTGCTCCGGGAGACCTTGCCTACATCAAACC
CGCCACCCAATGCGAGGCGCCGCAGCTTGTCACGGCTTGGTGCGACAGTG
TTGGGATCGCCAACCGTGGCATCGGCCCTGTTGTCTTTTACAAGGGCTTT
ACGCGAGAGTTCTTGAAGGGGAATGCGGGCACCTCCGCAGACTTGCTCCG
GGAGGCCTGTGAGGGCGTGCGTTCCGTGGGAACAGGGAAAAAAATCGTAC
TGGTGGACGGCGTAGGCTACCCGGCGGTGGGATCCATCTGCGGCATCAGC
AACGCGGACATTGCGCGGGCCTTAGGGGCCTGCCCTGTGCTGTTGGTGGG
CCGGTCGGGGGTTGGCGATGCGGTCGATTCTTTCAACCTGCACGCCACTT
ATTTCCGGCACCAGGGCGTGAAGGTGCTCGGCGCGGTATTCAACCGACTG
CCTCTGGAAGGTTTTTATTCCTTGGCGGCTTGTCGGGAGGCAGTGGGCGG
ATATTTTGCGAAATTCCAGTCCCAGAGCAAGGCGTATGGGTTTTTGCCCG
AGGTGGCCTCTTTGGGAAAAGTGCGCGAAGAGATGGAAGCGGAGCACGCG
GCGGGGCAGAAGCCGGGTGAAGAGAAGGCGAAGCGGATGGAGATGGTCCA
AGTCCTGGTGGAGGCATTCCGAGAGCATGTGGATTTGGAGGGGCTTTTGC
AGGACGCGTGGGAGTACCGgttggaagaaagggaaggacggcgcttatcg
gggggaaaggcaaccgttggagggaggaggaggggaagagaagtgCCATC
CGATGTGGACTTTGCGGAGTCTGGGCAAGGGAAGGCAgtgcaggaagggg
gagggggaggggggggcatttGTGCTTTTGTCCCGGGCCAGAAACGGAAA
AGTAGGGGAGAGATCGAGCAAGAGGCCAAGAAGCAGGGGGCCAAGGGGGG
ATGAGGATCGTAATCCCTCGAAGGTTCACGGGGAGCGAGACcgaggggat
gagggacGTGCCGAACCTGTCGTTttctgctttctcttccatgcATATGC
AGCATGCCCGTGAAGCTTCGaggactggagggagggggggagggagagag
ggagggggggcggctgGATCCTGCCTTCCATGATGACGGCACCTTCAACG
CAAGGTATTCTTGTGAGGTGGCTTGACCAGGCCATGCTTTCAAGAGCTAC
CAGTGGAGGTCCTGAGACGGGGGCAAGGTCTCAgccgcggaggggaaggc
acgagggcggggagaggccCGCTCTTTGTTGATAGTAAAGACATGACGCA
CTGCCGACGAGATTGCTCGGTGACttattttttaaaaattgcTTACAAGG
TGCCCTTGGCCCCGTCTTTTTCTCTATTTCTGGCTCCGaatcccctcttt
ctcgccttCCACCGAGCCGCTAGGACTCCTTCCCACTCTA back to topCoding sequence (CDS) from alignment at CM002460.1:962703..964992+ >rna3190 ID=rna3190|Name=rna3190|organism=Nannochloropsis gaditana|type=CDS|length=1593bp|location=Sequence derived from alignment at CM002460.1:962703..964992+ (Nannochloropsis gaditana)
ATGATTGAAATCCTACCTGTGAGCTCTCGTGAAGAGCTAAAGGAATTTTT
GTCGGCCAAACCCAAGGCCATACTGGGATTTCATGCTTATTGGCTTCGAG
GTTCTTCCGCTCTTGTTGAACTCGTCCTTCACCAGGCGGCTGCGGCGTTA
ACTGCTCCCGTGCCCACATCTATCACgtcaaaggaggaaagagaaaatcA
GGATGTGATAGTGACAGCGATTGAGGAGGTAGTCCTGGGGCTTTTGGACG
TAGGGCTGCACGAAGACTTGGCATTCGAGGCCGATGTGGGCATGCTGCCT
TGCTTCAACTTCTACCGCGACGGCCGATTGGTCGATGGGATCCGGGCGGA
TGGCAACTACGGGCATGGAAATAAGTTAGgaaacgggaggaagggggcgg
ctTGGATGATCCAGCGGTGTCTCGCCTTTGTAACcaccatggaggaggac
gtgggatACATCGACGTGAGTAGAGGGGATACCCCTTCACTGTCCGCCAC
GCAGCTCCTTTCAGCCTCCACGGCACCCCGATCTTTCTACCTGGTGaacg
ccatcccccccggcGAACCCCTCAATCTCTTTATCGCAGGCGACCGTTCC
AAAGTCGGCAAGTCCAGCGTCTGCCTGGCGCTTCtcggctccctccttcg
cctggGTTTTGCTCCGGGAGACCTTGCCTACATCAAACCCGCCACCCAAT
GCGAGGCGCCGCAGCTTGTCACGGCTTGGTGCGACAGTGTTGGGATCGCC
AACCGTGGCATCGGCCCTGTTGTCTTTTACAAGGGCTTTACGCGAGAGTT
CTTGAAGGGGAATGCGGGCACCTCCGCAGACTTGCTCCGGGAGGCCTGTG
AGGGCGTGCGTTCCGTGGGAACAGGGAAAAAAATCGTACTGGTGGACGGC
GTAGGCTACCCGGCGGTGGGATCCATCTGCGGCATCAGCAACGCGGACAT
TGCGCGGGCCTTAGGGGCCTGCCCTGTGCTGTTGGTGGGCCGGTCGGGGG
TTGGCGATGCGGTCGATTCTTTCAACCTGCACGCCACTTATTTCCGGCAC
CAGGGCGTGAAGGTGCTCGGCGCGGTATTCAACCGACTGCCTCTGGAAGG
TTTTTATTCCTTGGCGGCTTGTCGGGAGGCAGTGGGCGGATATTTTGCGA
AATTCCAGTCCCAGAGCAAGGCGTATGGGTTTTTGCCCGAGGTGGCCTCT
TTGGGAAAAGTGCGCGAAGAGATGGAAGCGGAGCACGCGGCGGGGCAGAA
GCCGGGTGAAGAGAAGGCGAAGCGGATGGAGATGGTCCAAGTCCTGGTGG
AGGCATTCCGAGAGCATGTGGATTTGGAGGGGCTTTTGCAGGACGCGTGG
GAGTACCGgttggaagaaagggaaggacggcgcttatcggggggaaaggc
aaccgttggagggaggaggaggggaagagaagtgCCATCCGATGTGGACT
TTGCGGAGTCTGGGCAAGGGAAGGCAgtgcaggaagggggagggggaggg
gggggcatttGTGCTTTTGTCCCGGGCCAGAAACGGAAAAGTAGGGGAGA
GATCGAGCAAGAGGCCAAGAAGCAGGGGGCCAAGGGGGGATGA back to top
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