EWM27506.1, cds3182 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27506.1 vs. NCBI_GenBank
Match: gi|585109770|gb|EWM27506.1| (hypothetical protein Naga_100099g19 [Nannochloropsis gaditana]) HSP 1 Score: 1069.69 bits (2765), Expect = 0.000e+0 Identity = 530/530 (100.00%), Postives = 530/530 (100.00%), Query Frame = 0
Query: 1 MIEILPVSSREELKEFLSAKPKAILGFHAYWLRGSSALVELVLHQAAAALTAPVPTSITSKEERENQDVIVTAIEEVVLGLLDVGLHEDLAFEADVGMLPCFNFYRDGRLVDGIRADGNYGHGNKLGNGRKGAAWMIQRCLAFVTTMEEDVGYIDVSRGDTPSLSATQLLSASTAPRSFYLVNAIPPGEPLNLFIAGDRSKVGKSSVCLALLGSLLRLGFAPGDLAYIKPATQCEAPQLVTAWCDSVGIANRGIGPVVFYKGFTREFLKGNAGTSADLLREACEGVRSVGTGKKIVLVDGVGYPAVGSICGISNADIARALGACPVLLVGRSGVGDAVDSFNLHATYFRHQGVKVLGAVFNRLPLEGFYSLAACREAVGGYFAKFQSQSKAYGFLPEVASLGKVREEMEAEHAAGQKPGEEKAKRMEMVQVLVEAFREHVDLEGLLQDAWEYRLEEREGRRLSGGKATVGGRRRGREVPSDVDFAESGQGKAVQEGGGGGGGICAFVPGQKRKSRGEIEQEAKKQGAKGG 530
MIEILPVSSREELKEFLSAKPKAILGFHAYWLRGSSALVELVLHQAAAALTAPVPTSITSKEERENQDVIVTAIEEVVLGLLDVGLHEDLAFEADVGMLPCFNFYRDGRLVDGIRADGNYGHGNKLGNGRKGAAWMIQRCLAFVTTMEEDVGYIDVSRGDTPSLSATQLLSASTAPRSFYLVNAIPPGEPLNLFIAGDRSKVGKSSVCLALLGSLLRLGFAPGDLAYIKPATQCEAPQLVTAWCDSVGIANRGIGPVVFYKGFTREFLKGNAGTSADLLREACEGVRSVGTGKKIVLVDGVGYPAVGSICGISNADIARALGACPVLLVGRSGVGDAVDSFNLHATYFRHQGVKVLGAVFNRLPLEGFYSLAACREAVGGYFAKFQSQSKAYGFLPEVASLGKVREEMEAEHAAGQKPGEEKAKRMEMVQVLVEAFREHVDLEGLLQDAWEYRLEEREGRRLSGGKATVGGRRRGREVPSDVDFAESGQGKAVQEGGGGGGGICAFVPGQKRKSRGEIEQEAKKQGAKGG
Sbjct: 1 MIEILPVSSREELKEFLSAKPKAILGFHAYWLRGSSALVELVLHQAAAALTAPVPTSITSKEERENQDVIVTAIEEVVLGLLDVGLHEDLAFEADVGMLPCFNFYRDGRLVDGIRADGNYGHGNKLGNGRKGAAWMIQRCLAFVTTMEEDVGYIDVSRGDTPSLSATQLLSASTAPRSFYLVNAIPPGEPLNLFIAGDRSKVGKSSVCLALLGSLLRLGFAPGDLAYIKPATQCEAPQLVTAWCDSVGIANRGIGPVVFYKGFTREFLKGNAGTSADLLREACEGVRSVGTGKKIVLVDGVGYPAVGSICGISNADIARALGACPVLLVGRSGVGDAVDSFNLHATYFRHQGVKVLGAVFNRLPLEGFYSLAACREAVGGYFAKFQSQSKAYGFLPEVASLGKVREEMEAEHAAGQKPGEEKAKRMEMVQVLVEAFREHVDLEGLLQDAWEYRLEEREGRRLSGGKATVGGRRRGREVPSDVDFAESGQGKAVQEGGGGGGGICAFVPGQKRKSRGEIEQEAKKQGAKGG 530
BLAST of EWM27506.1 vs. NCBI_GenBank
Match: gi|1214708328|gb|OWZ19623.1| (hypothetical protein PHMEG_0006093 [Phytophthora megakarya]) HSP 1 Score: 302.753 bits (774), Expect = 2.002e-93 Identity = 156/274 (56.93%), Postives = 195/274 (71.17%), Query Frame = 0
Query: 184 AIPPGE--PLNLFIAGDRSKVGKSSVCLALLGSLLRLGFAPGDLAYIKPATQCEAPQLVTAWCDSVGIANRGIGPVVFYKGFTREFLKGNAGTSADLLREACEGVRSVGTGKKIVLVDGVGYPAVGSICGISNADIARALGACPVLLVGRSGVGDAVDSFNLHATYFRHQGVKVLGAVFNRLPLEGFYSLAACREAVGGYFAKFQSQSKAYGFLPEV------ASLGKVREEMEAEHAAGQKPGEEKAKRMEMVQVLVEAFREHVDLEGLLQDA 449
AIP E PL LF++GDR++VGKS+VCL L+G+LLR G+ P D+AYIKPATQCE PQLVT +C GI +GP++FYKGFTREFLKG TSA LL +A + V VG GKKIV+VDGVGYPAVGSICG+SNA +A L PV+LVG+ GVGDAVDSFNL+AT+F GVKVLG +FNRLP +GFYSL CRE+V YF +FQS+ YGF+PE+ A + + EE E E +G E+ + +V+AF + +DL+ LL DA
Sbjct: 110 AIPTSEKPPLRLFVSGDRAQVGKSTVCLGLVGALLRSGYKPNDIAYIKPATQCEKPQLVTKFCRQQGITCCEVGPILFYKGFTREFLKGETETSAQLLEKAKKKVEEVGRGKKIVVVDGVGYPAVGSICGVSNAHVAGKL-ETPVVLVGKKGVGDAVDSFNLNATFFESHGVKVLGGIFNRLPEDGFYSLENCRESVTAYFEQFQSEKHVYGFIPELTDGGHSALIAEKTEEDENEPVSGVF---LTVAEDELAKKVVDAFVDSIDLKKLLADA 379
BLAST of EWM27506.1 vs. NCBI_GenBank
Match: gi|695406998|ref|XP_009524258.1| (hypothetical protein PHYSODRAFT_557542 [Phytophthora sojae] >gi|348681725|gb|EGZ21541.1| hypothetical protein PHYSODRAFT_557542 [Phytophthora sojae]) HSP 1 Score: 293.893 bits (751), Expect = 1.177e-89 Identity = 149/271 (54.98%), Postives = 191/271 (70.48%), Query Frame = 0
Query: 190 PLNLFIAGDRSKVGKSSVCLALLGSLLRLGFAPGDLAYIKPATQCEAPQLVTAWCDSVGIANRGIGPVVFYKGFTREFLKGNAGTSADLLREACEGVRSVGTGKKIVLVDGVGYPAVGSICGISNADIARALGACPVLLVGRSGVGDAVDSFNLHATYFRHQGVKVLGAVFNRLPLEGFYSLAACREAVGGYFAKFQSQSKAYGFLPEVASLG-------KVREEMEAEHAAGQKPGEEKAKRMEMVQVLVEAFREHVDLEGLLQDAWEYR 453
PL LF++GDR++VGKS+ CL L+G+LLR G+ DLAYIKPATQCE PQLVT +C G+A +GP++FYKGFTREFL+G ++ LL +A + V VGTGKK+V+VDGVGYPAVGSICG+SNA +A+ L PV+LVG+ GVGDAVDSFNL+AT+F GVKVLG +FNRLP +GFYSL C+E V YF +FQ YGFLPE+ G K EE ++E A G A ++ + +V+AF +H+DL LL DA Y+
Sbjct: 134 PLRLFVSGDRAQVGKSTTCLGLVGALLREGYKAEDLAYIKPATQCEKPQLVTKFCRQQGVACCEVGPILFYKGFTREFLRGETESAPQLLEKARKKVEEVGTGKKVVIVDGVGYPAVGSICGVSNAHVAKKL-EVPVVLVGKKGVGDAVDSFNLNATFFESHGVKVLGGIFNRLPEDGFYSLEHCKENVTAYFEQFQPDKHVYGFLPELTDGGHSALIAEKGSEEGQSEPAPGVF---LTAAEDQLAKKVVDAFAKHIDLTKLLADAKVYQ 400
BLAST of EWM27506.1 vs. NCBI_GenBank
Match: gi|953497766|emb|CEG40526.1| (P-loop containing nucleoside triphosphate hydrolase [Plasmopara halstedii]) HSP 1 Score: 289.656 bits (740), Expect = 1.546e-89 Identity = 144/264 (54.55%), Postives = 188/264 (71.21%), Query Frame = 0
Query: 190 PLNLFIAGDRSKVGKSSVCLALLGSLLRLGFAPGDLAYIKPATQCEAPQLVTAWCDSVGIANRGIGPVVFYKGFTREFLKGNAGTSADLLREACEGVRSVGTGKKIVLVDGVGYPAVGSICGISNADIARALGACPVLLVGRSGVGDAVDSFNLHATYFRHQGVKVLGAVFNRLPLEGFYSLAACREAVGGYFAKFQSQSKAYGFLPEVASLGKVREEMEAEHAAGQ---KPGEEKAK-RMEMVQVLVEAFREHVDLEGLLQDA 449
PL LFI+GDR+++GKS VCL L+G+LL+ G+ D+AYIKPATQCE PQLVT +C GI+ +GP++FYKGFTR+FLKG TS+ LL +A + V VG GKK V+VDGVGYPAVGSICG+SNAD+AR L A PV+LVG+ GVGDA+DSFNL+A++F GVKVLG +FNRLP +GFYSL C+E V YF ++Q Q YGFLPE+ + + E HA Q PG ++ ++ + V+AF ++D+ LL D
Sbjct: 128 PLRLFISGDRAQIGKSMVCLGLIGALLQHGYQAVDIAYIKPATQCETPQLVTKFCRQHGISCCEVGPILFYKGFTRQFLKGETETSSQLLEKAKQKVDEVGIGKKFVIVDGVGYPAVGSICGVSNADVARKLAA-PVVLVGKKGVGDAIDSFNLNASFFESYGVKVLGGIFNRLPNDGFYSLELCQENVTAYFEQYQPQKHIYGFLPELNNDRHDKVNAENTHATEQIESIPGVFLSQAEDDLAKKFVDAFMANIDVTKLLADT 390
BLAST of EWM27506.1 vs. NCBI_GenBank
Match: gi|698803154|ref|XP_009834606.1| (hypothetical protein H257_09922 [Aphanomyces astaci] >gi|574110465|gb|ETV75964.1| hypothetical protein H257_09922 [Aphanomyces astaci]) HSP 1 Score: 283.108 bits (723), Expect = 7.044e-87 Identity = 150/285 (52.63%), Postives = 188/285 (65.96%), Query Frame = 0
Query: 169 LLSASTAPRSFYLVNAIPPGEPLNLFIAGDRSKVGKSSVCLALLGSLLRLGFAPGDLAYIKPATQCEAPQLVTAWCDSVGIANRGIGPVVFYKGFTREFLK--GNAGTSADLLREACEGVRSVGTGKKIVLVDGVGYPAVGSICGISNADIARALGACPVLLVGRSGVGDAVDSFNLHATYFRHQGVKVLGAVFNRLPLEGFYSLAACREAVGGYFAKFQSQS--KAYGFLPEVASLGKVREEMEAEHAAGQKPGEEKAKRMEMVQVLVEAFREHVDLEGLLQDA 449
++ ST+P + P G L LFI GDRS+VGKS+VCL +LG+LL+LG+ P +LAYIKPATQCE PQLV +C+ GIA + IGPVVFY GFTR FL A S DLLR+ V ++ GK+IV++DGVGYPAVGSICG+SNADIA AL VLLVG+ GVGDAVDSFNL+ATYF + V+VLG +FNRLP G+YSL C+ AV YFAK + KAYGF+P E++ +A P E A +V A +HVD+ G++ DA
Sbjct: 75 FVTPSTSPPPLFPSAGTPNGA-LRLFIGGDRSQVGKSTVCLGILGALLQLGYHPSELAYIKPATQCEEPQLVARFCEHYGIAAQPIGPVVFYAGFTRAFLDQPDPARASLDLLRQVVHAVDAISVGKRIVIIDGVGYPAVGSICGVSNADIAAALQPISVLLVGKKGVGDAVDSFNLNATYFSSRHVRVLGGIFNRLPAHGYYSLDQCKAAVTTYFAKMSNLDGYKAYGFVP----------ELDPTTSAISPPDEWHA--------IVHAMMQHVDVRGIVADA 340
BLAST of EWM27506.1 vs. NCBI_GenBank
Match: gi|223993097|ref|XP_002286232.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220977547|gb|EED95873.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 281.567 bits (719), Expect = 1.006e-84 Identity = 143/274 (52.19%), Postives = 186/274 (67.88%), Query Frame = 0
Query: 193 LFIAGDRSKVGKSSVCLALLGSLLRLG-FAPGDLAYIKPATQCEAPQLVTAWCDSVGI-ANRGIGPVVFYKGFTREFLKGNAG-TSADLLREACEGVRSVGTGKKIVLVDGVGYPAVGSICGISNADIARALGA------------CPVLLVGRSGVGDAVDSFNLHATYFRHQGVKVLGAVFNRLPLEGFYSLAACREAVGGYFAKFQSQSKAYGFLPEVASLGKVREEMEAEHAAGQKPGEEKAKRMEMVQVLVEAFREHVDLEGLLQDAWE 451
+FIAGDRS+VGKSS+C+ LLG+LL+ G + P DLAYIKPATQCE QLV A+C GI A IGP+V+YKGFTR FLKG G S LL+ A E V S+ GKK+V++DGVGYPAVGSI G NA +A A G PVLL+G+SGVGDAVDSFN++ATYF H+ + V+G++FN+L L GFYSL C+EA+ YF KFQ KA+GF+PE+ SL RE + A E+ + ++ + VE FR+HV+++ ++ A E
Sbjct: 197 IFIAGDRSQVGKSSICMGLLGALLKTGKYKPSDLAYIKPATQCEQTQLVEAFCKHKGIDACVPIGPIVYYKGFTRSFLKGETGENSEQLLQNASEAVDSLAKGKKVVIIDGVGYPAVGSITGTDNASVALACGVPFTMAQSTQRAPVPVLLIGKSGVGDAVDSFNINATYFIHRNIPVVGSIFNKLSLNGFYSLQNCKEAIEMYFHKFQPDKKAFGFIPEIQSLSNARENI-----ANLAQEEQMQQALDAADLFVEEFRKHVNVDDIVLSAKE 465
BLAST of EWM27506.1 vs. NCBI_GenBank
Match: gi|970663108|gb|KUG00358.1| (hypothetical protein AM587_10016764 [Phytophthora nicotianae]) HSP 1 Score: 274.633 bits (701), Expect = 1.458e-82 Identity = 152/264 (57.58%), Postives = 187/264 (70.83%), Query Frame = 0
Query: 190 PLNLFIAGDRSKVGKSSVCLALLGSLLRLGFAPGDLAYIKPATQCEAPQLVTAWCDSVGIANRGIGPVVFYKGFTREFLKGNAGTSADLLREACEGVRSVGTGKKIVLVDGVGYPAVGSICGISNADIARALGACPVLLVGRSGVGDAVDSFNLHATYFRHQGVKVLGAVFNRLPLEGFYSLAACREAVGGYFAKFQSQSKAYGFLPEVASLGKVREEMEAEHAAGQKPGEE----KAKRMEMVQVLVEAFREHVDLEGLLQDA 449
PL LFI+GDR++VGKS+VCL L+G+LLR G+A GD+AYIKPATQCE PQLVT +C GI +GP++FYKGFTREFLKG TSA LL +A + V VG GKK+V+VDGVGYPAVGSICG+SNA +A+ L A PV+LVG+ GVGDAVDSFNL+AT+F GVKVLG +FNRLP +GFYSL C+E V YF +FQ + YGFLPE+ G E GQK E ++ + +V+AF E +DL LL D
Sbjct: 132 PLRLFISGDRAQVGKSTVCLGLVGALLRSGYAAGDIAYIKPATQCEKPQLVTKFCRQQGITCCEVGPILFYKGFTREFLKGETDTSAQLLEKAKQKVDEVGRGKKVVVVDGVGYPAVGSICGVSNAHVAKKLEA-PVVLVGKKGVGDAVDSFNLNATFFESHGVKVLGGIFNRLPEDGFYSLEHCKENVTAYFEQFQPEKHVYGFLPELTDGGHSALIAEKASEEGQKEPEPGVFLTVAEGQLAKNVVDAFVESIDLTKLLVDT 394
BLAST of EWM27506.1 vs. NCBI_GenBank
Match: gi|566033523|gb|ETI56434.1| (hypothetical protein F443_00978 [Phytophthora parasitica P1569] >gi|568028779|gb|ETM02715.1| hypothetical protein L917_00873 [Phytophthora parasitica] >gi|568059342|gb|ETM55918.1| hypothetical protein L914_00912 [Phytophthora parasitica]) HSP 1 Score: 274.633 bits (701), Expect = 3.548e-82 Identity = 152/264 (57.58%), Postives = 187/264 (70.83%), Query Frame = 0
Query: 190 PLNLFIAGDRSKVGKSSVCLALLGSLLRLGFAPGDLAYIKPATQCEAPQLVTAWCDSVGIANRGIGPVVFYKGFTREFLKGNAGTSADLLREACEGVRSVGTGKKIVLVDGVGYPAVGSICGISNADIARALGACPVLLVGRSGVGDAVDSFNLHATYFRHQGVKVLGAVFNRLPLEGFYSLAACREAVGGYFAKFQSQSKAYGFLPEVASLGKVREEMEAEHAAGQKPGEE----KAKRMEMVQVLVEAFREHVDLEGLLQDA 449
PL LFI+GDR++VGKS+VCL L+G+LLR G+A GD+AYIKPATQCE PQLVT +C GI +GP++FYKGFTREFLKG TSA LL +A + V VG GKK+V+VDGVGYPAVGSICG+SNA +A+ L A PV+LVG+ GVGDAVDSFNL+AT+F GVKVLG +FNRLP +GFYSL C+E V YF +FQ + YGFLPE+ G E GQK E ++ + +V+AF E +DL LL D
Sbjct: 163 PLRLFISGDRAQVGKSTVCLGLVGALLRSGYAAGDIAYIKPATQCEKPQLVTKFCRQQGITCCEVGPILFYKGFTREFLKGETDTSAQLLEKAKQKVDEVGRGKKVVVVDGVGYPAVGSICGVSNAHVAKKLEA-PVVLVGKKGVGDAVDSFNLNATFFESHGVKVLGGIFNRLPEDGFYSLEHCKENVTAYFEQFQPEKHVYGFLPELTDGGHSALIAEKASEEGQKEPEPGVFLTVAEGQLAKNVVDAFVESIDLTKLLVDT 425
BLAST of EWM27506.1 vs. NCBI_GenBank
Match: gi|675163503|ref|XP_008890636.1| (hypothetical protein PPTG_00834 [Phytophthora parasitica INRA-310] >gi|568109972|gb|ETN24579.1| hypothetical protein PPTG_00834 [Phytophthora parasitica INRA-310]) HSP 1 Score: 273.863 bits (699), Expect = 6.856e-82 Identity = 152/264 (57.58%), Postives = 187/264 (70.83%), Query Frame = 0
Query: 190 PLNLFIAGDRSKVGKSSVCLALLGSLLRLGFAPGDLAYIKPATQCEAPQLVTAWCDSVGIANRGIGPVVFYKGFTREFLKGNAGTSADLLREACEGVRSVGTGKKIVLVDGVGYPAVGSICGISNADIARALGACPVLLVGRSGVGDAVDSFNLHATYFRHQGVKVLGAVFNRLPLEGFYSLAACREAVGGYFAKFQSQSKAYGFLPEVASLGKVREEMEAEHAAGQKPGEE----KAKRMEMVQVLVEAFREHVDLEGLLQDA 449
PL LFI+GDR++VGKS+VCL L+G+LLR G+A GD+AYIKPATQCE PQLVT +C GI +GP++FYKGFTREFLKG TSA LL +A + V VG GKK+V+VDGVGYPAVGSICG+SNA +A+ L A PV+LVG+ GVGDAVDSFNL+AT+F GVKVLG +FNRLP +GFYSL C+E V YF +FQ + YGFLPE+ G E GQK E ++ + +V+AF E +DL LL D
Sbjct: 163 PLRLFISGDRAQVGKSTVCLGLVGALLRSGYAAGDIAYIKPATQCEKPQLVTKFCRQQGITCCEVGPILFYKGFTREFLKGETDTSAQLLEKAKQKVDEVGRGKKVVVVDGVGYPAVGSICGVSNAHVAKKLEA-PVVLVGKKGVGDAVDSFNLNATFFESYGVKVLGGIFNRLPEDGFYSLEHCKENVTAYFEQFQPEKHVYGFLPELTDGGHSALIAEKASEEGQKEPEPGVFLTVAEGQLAKNVVDAFVESIDLTKLLVDT 425
BLAST of EWM27506.1 vs. NCBI_GenBank
Match: gi|301121138|ref|XP_002908296.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262103327|gb|EEY61379.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 272.322 bits (695), Expect = 8.453e-82 Identity = 162/306 (52.94%), Postives = 201/306 (65.69%), Query Frame = 0
Query: 191 LNLFIAGDRSKVGKSSVCLALLGSLLRLGFAPGDLAYIKPATQCEAPQLVTAWCDSVGIANRGIGPVVFYKGFTREFLKGNAGTSADLLREACEGVRSVGTGKKIVLVDGVGYPAVGSICGISNADIARALGACPVLLVGRSGVGDAVDSFNLHATYFRHQGVKVLGAVFNRLPLEGFYSLAACREAVGGYFAKFQSQSKAYGFLPEVASLGKVREEMEAEHAAGQKPGEE----KAKRMEMVQVLVEAFREHVDLEGLLQDAWEYRLEEREGRRLSGGKATV------GGRRRGREVPSDVDFAE 486
L LFI+GDR++VGKS+VCL L+G+LLR G+A D+AYIKPATQCE PQLVT +C GI +GP++FYKGFTREFLKG TSA LL +A + V VG GKK+V+VDGVGYPAVGSICG+SNA +A+ L PV+LVG+ GVGDAVDSFNL+AT+F GVKVLG +FNRLP +GFYSL CRE V YF +FQS+ + YGFLPE+ G E GQ A E+ +V+AF + +DL LL DA E E + +G KA V R R E+P+ + E
Sbjct: 130 LRLFISGDRAQVGKSTVCLGLVGALLRSGYAASDIAYIKPATQCEKPQLVTKFCRQQGITCCEVGPILFYKGFTREFLKGETETSAQLLEKAKQKVEEVGKGKKVVVVDGVGYPAVGSICGVSNAHVAKKLKT-PVVLVGKKGVGDAVDSFNLNATFFESHGVKVLGGIFNRLPEDGFYSLEHCRENVTAYFEQFQSEKRVYGFLPELTDGGHSALFAEKTSEEGQNDSVSGVFLTAAEDELATKVVDAFVQSIDLTKLLVDA-EASKEPAKAVGSNGTKAVVPKANTKPKRARNFEIPTSFETVE 433 The following BLAST results are available for this feature:
BLAST of EWM27506.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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