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Properties
Property Name | Value |
Product | sideroflexin 2 |
Orig transcript id | gnl|cribi|Naga_100101g19.9053.mrna |
Orig protein id | gnl|cribi|Naga_100101g19.9053 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002460.1 | supercontig | CM002460.1:862235..863172 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3154 ID=rna3154|Name=rna3154|organism=Nannochloropsis gaditana|type=mRNA|length=2095bp TTGATGCGGCAGCGGGAGCTGATGGAGGGGATCGACATTAAGACGCAGGA GGGGGAGGTGCTGGGTAAGAGCAAAGAGGCCGCCAAGACGGCGGTCGCCC AAGTTGTGCCCTCCAGGATTTTGATGGCTACACCCGGGATGGTAATCCCT CCCGTGATCATGGTGCGGTTGGAACAAACGGCTGCACTGCGTGCGACTCC TAGTCTCGGTGCCCCTATTATGGTGGGCATGACAGGTCTTTTCCTCGCCT TCTCCACACCTTTGTGCTGCGCACTGTTCCCTCAAGAAGCGTCCATTTCG CTAAGTCAGATCGAGCCAGAGTTACAGGAAAAGGCAAAGAAAATGAATCC AGTTCCAACTGTCTTTTACTACAACAAGGGGCTGTAGACAAGCAGGATTG GACAGCTTTCAAGCCGTGCTCGACAAACTTTAAATTTATTATGATCACCT ACGCGAAGTCTGGAACGTGAATCTTATCGACGAAGAGAGAAGCAATAGGC AGAGGTATGGGATAGTTGCAGCATAGCGGACGCATACATAATGACTTCAA TCAGGAACGGACGCGCCCCAAAAAAATCAATCACGCACACGTCATCGCAT TAAATCTGTATCTTTAATTTGCTTATACCAACACAACGTGGACTTCAATT CTCTAGCAGTGGTTTGACCACAGTAAACCTAAAATGGAGCAGGAGGTTAT TGTGTGCGGCCGAGAGGGTTCGAGCGAGCGGATGCGAGAGCTTTTCCTGC CTCCCCGTGCAGAGATCAACGCCACTGCTTTCAAGACTTGACTTCTGTCT CACCGCAGATTCCTGTATGTCACACGCCATCTCAGGTTGTGCTAGACTCG CACGGCCGTAAATTTGAACGGACAATCGAGGAAGTCAGTTCTGAAAAACA AAGCGAAGGATTCTAGTCCAGGGGCAGCAGCAACATGGCTAGCAGGCGGG GCAACGCATCGTATGGAATCCACAAATTCTTCCTCGTGAGCATTCTCTTC CTCGTACAGACCGCAGTAGGGCAACAGCAACAGCAGCTGCACCGGTACCC CGGGCCTGGCGGTCCTCCCCGGAGACGACCTCCAGGCCCGAATGCCATTG AACTGGGAAAGGAGAACAAGCGTGCTACGTATACAGCAATTGCGGGAGGT GTTCTGGCGGGGTATTGGTTGTCTGGATGGAATTATCGGAGTAAAAACAA GAAGATGAAGCAGAAGTATGAAAGAGATTTGGCGCACCAGGAGAAGCGGG TAGAGGACGCCATTCGCTCGGTTAGACAGCAGTACGAAGACGTGTTGGAA AGAAAGCAGGAGGAATACGTGGAGAAGTACAAGCATCTCCAGTACATCGA GAATGCTATGGGAGAAGCTGGCATCCCAGTTGATCTCTCCATGGTGTCTC CGTCAGCTTCACTTCAACAAGACTATGCAGAGTTCAAGCAGCCGGATCTG AATGGCGACGACAAGATCACGCGGCGGGAGTTCGACCAGTACATGCGTCA ATATCTGGCCGCGAATCCCGAGTACAGCAAGTACGACTACCCCTCATTCG ATGAGTTCGACAAGGATGGTGACAATGCCATCACGTTCGCGGAATGGCAG CAGTATATCCAGGACGCAGAGGCTGCAGCTTTAGCTCAAGAGCAGCTTAT GTATCAACAACAAAAGAAGGGCAAAATGGCCGGACGCCGGAGATAGACGT GGAGTATGCGCGGGATGATTAATGCAAGAGTGCTCTCAAGGATTCCTTGA GGCAATACAAGCATTAAGCAAACGGATGGCTGGATTGTCTCAATGTGGCG CATACGGGACTTTAAATTCAAACAGCTGGGCCTGGAAAAGACGCGGATGG AGGTTGGCAATATTCGTGGATGGAATTGAGGACATCAAACGTGCATGAAA AGGAGAGGGAAAAAACAAATTAGTTTCGCCTGATCGGTATCAGCGCATTT GTTCTTCCACGTGTTTGCCCTCATACATCACATTTACGAAACCTTTTACT TTCTATATAATAAACAAACCAGAGAACCCCACTTTTGATACAAATACATG TCAGTGTCATCTTATCTGTAGCAAGGCAAGATTGTCTCTACTTGT back to topprotein sequence of rna3154 >rna3154-protein ID=rna3154-protein|Name=rna3154|organism=Nannochloropsis gaditana|type=polypeptide|length=191bp MVFGWGKGKAKPEKPVEPEPPKVPRIDLSKPRWDQSTFEGRARHFFSTTN PLNSLASDAELDRAKTLLEQYKAGTEPPGTTEEQVWEAKHLYDSAYHPET GEKLFLPGRMSFQVPGNMVITGCMMQFYRSIPAVVFWQWVNQSFNAIVNY SNRNACLCGHGCWIQPSYRSQSEIEPGDDWTFCASTRSGCC back to topmRNA from alignment at CM002460.1:862235..863172- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3154 ID=rna3154|Name=rna3154|organism=Nannochloropsis gaditana|type=mRNA|length=938bp|location=Sequence derived from alignment at CM002460.1:862235..863172- (Nannochloropsis gaditana) ATGGTGTTTGGATGGGGCAAGGGCAAAGCCAAGCCCGAGAAGCCAGTGGA
GCCTGAGCCTCCTAAAGTGCCGCGAATCGATTTGAGCAAGGTAAATGATG
ACTGTAAAGGGACCAACAAGGTTGTAGATGATTGCTCGTCCTAGAGCATT
GTCCAGAATGCTTTGTCAGAAAAAATGAACTCAGGGAGGATGCTGTGTGA
TTCGAAGGGACGCGTCGGAAAGGCCAGGTGACTTAGTCCCGGCATTGCAT
CGAGAAAGTTTTTGACAGGAGATAGATGGTGGCGATTTGGCCCATACAAG
GAAGCCTTGAATAGGAAAATTTGTATACAATGGACAGCCATATGATGTTT
GAAATGGTTCACTCAGGTCAAATCCTTTCGTCCGCCCACAATTTGACAGC
CTCGATGGGACCAAAGCACCTTCGAAGGCCGTGCTCGCCATTTCTTCAGC
ACAACTAATCCTCTCAACAGTCTTGCCTCAGATGCGGAGCTGGACCGTGC
CAAGACGCTTCTGGAGCAGTACAAAGCAGGCACGGAGCCCCCGGGGACGA
CGGAGGAACAGGTGTGGGAAGCTAAGCACCTGTATGACTCTGCCTATCAC
CCCGAGACTGGCGAGAAGCTTTTCTTGCCAGGCAGAATGTCGTTTCAAGT
GCCAGGAAATATGGTCATTACCGGATGCATGATGCAGTTCTACCGCTCAA
TACCGGCGGTTGTATTCTGGCAATGGGTGAACCAAAGCTTTAATGCCATC
GTCAATTACTCAAACCGCAATGCGTCAGCAGGTGTGACCACCGAACAGCT
AGGTCAGGCATACGTGGCCGCAACAGCTGCCTCTGTGGCCACGGCTGTTG
GATTCAACCGTCTTATCGCTCGCAATCCGAAATTGAGCCAGGGGATGATT
GGACGTTTTGTGCCTCTACTCGCAGTGGCTGCTGCTAA back to topCoding sequence (CDS) from alignment at CM002460.1:862235..863172- >rna3154 ID=rna3154|Name=rna3154|organism=Nannochloropsis gaditana|type=CDS|length=1728bp|location=Sequence derived from alignment at CM002460.1:862235..863172- (Nannochloropsis gaditana) CTGCCTCTGTGGCCACGGCTGTTGGATTCAACCGTCTTATCGCTCGCAAT CCGAAATTGAGCCAGGGGATGATTGGACGTTTTGTGCCTCTACTCGCAGT GGCTGCTGCTAACCTCGATGGGACCAAAGCACCTTCGAAGGCCGTGCTCG CCATTTCTTCAGCACAACTAATCCTCTCAACAGTCTTGCCTCAGATGCGG AGCTGGACCGTGCCAAGACGCTTCTGGAGCAGTACAAAGCAGGCACGGAG CCCCCGGGGACGACGGAGGAACAGGTGTGGGAAGCTAAGCACCTGTATGA CTCTGCCTATCACCCCGAGACTGGCGAGAAGCTTTTCTTGCCAGGCAGAA TGTCGTTTCAAGTGCCAGGAAATATGGTCATTACCGGATGCATGATGCAG TTCTACCGCTCAATACCGGCGGTTGTATTCTGGCAATGGGTGAACCAAAG CTTTAATGCCATCGTCAATTACTCAAACCGCAATGCATGGTGTTTGGATG GGGCAAGGGCAAAGCCAAGCCCGAGAAGCCAGTGGAGCCTGAGCCTCCTA AAGTGCCGCGAATCGATTTGAGCAAGCTGCCTCTGTGGCCACGGCTGTTG GATTCAACCGTCTTATCGCTCGCAATCCGAAATTGAGCCAGGGGATGATT GGACGTTTTGTGCCTCTACTCGCAGTGGCTGCTGCTAACCTCGATGGGAC CAAAGCACCTTCGAAGGCCGTGCTCGCCATTTCTTCAGCACAACTAATCC TCTCAACAGTCTTGCCTCAGATGCGGAGCTGGACCGTGCCAAGACGCTTC TGGAGCAGTACAAAGCAGGCACGGAGCCCCCGGGGACGACGGAGGAACAG GTGTGGGAAGCTAAGCACCTGTATGACTCTGCCTATCACCCCGAGACTGG CGAGAAGCTTTTCTTGCCAGGCAGAATGTCGTTTCAAGTGCCAGGAAATA TGGTCATTACCGGATGCATGATGCAGTTCTACCGCTCAATACCGGCGGTT GTATTCTGGCAATGGGTGAACCAAAGCTTTAATGCCATCGTCAATTACTC AAACCGCAATGCATGGTGTTTGGATGGGGCAAGGGCAAAGCCAAGCCCGA GAAGCCAGTGGAGCCTGAGCCTCCTAAAGTGCCGCGAATCGATTTGAGCA AGCTGCCTCTGTGGCCACGGCTGTTGGATTCAACCGTCTTATCGCTCGCA ATCCGAAATTGAGCCAGGGGATGATTGGACGTTTTGTGCCTCTACTCGCA GTGGCTGCTGCTAACCTCGATGGGACCAAAGCACCTTCGAAGGCCGTGCT CGCCATTTCTTCAGCACAACTAATCCTCTCAACAGTCTTGCCTCAGATGC GGAGCTGGACCGTGCCAAGACGCTTCTGGAGCAGTACAAAGCAGGCACGG AGCCCCCGGGGACGACGGAGGAACAGGTGTGGGAAGCTAAGCACCTGTAT GACTCTGCCTATCACCCCGAGACTGGCGAGAAGCTTTTCTTGCCAGGCAG AATGTCGTTTCAAGTGCCAGGAAATATGGTCATTACCGGATGCATGATGC AGTTCTACCGCTCAATACCGGCGGTTGTATTCTGGCAATGGGTGAACCAA AGCTTTAATGCCATCGTCAATTACTCAAACCGCAATGCATGGTGTTTGGA TGGGGCAAGGGCAAAGCCAAGCCCGAGAAGCCAGTGGAGCCTGAGCCTCC TAAAGTGCCGCGAATCGATTTGAGCAAG back to top
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