EWM27515.1, cds3146 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27515.1 vs. NCBI_GenBank
Match: gi|585109781|gb|EWM27515.1| (sideroflexin 2 [Nannochloropsis gaditana]) HSP 1 Score: 404.06 bits (1037), Expect = 8.459e-143 Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0
Query: 1 MVFGWGKGKAKPEKPVEPEPPKVPRIDLSKPRWDQSTFEGRARHFFSTTNPLNSLASDAELDRAKTLLEQYKAGTEPPGTTEEQVWEAKHLYDSAYHPETGEKLFLPGRMSFQVPGNMVITGCMMQFYRSIPAVVFWQWVNQSFNAIVNYSNRNACLCGHGCWIQPSYRSQSEIEPGDDWTFCASTRSGCC 191
MVFGWGKGKAKPEKPVEPEPPKVPRIDLSKPRWDQSTFEGRARHFFSTTNPLNSLASDAELDRAKTLLEQYKAGTEPPGTTEEQVWEAKHLYDSAYHPETGEKLFLPGRMSFQVPGNMVITGCMMQFYRSIPAVVFWQWVNQSFNAIVNYSNRNACLCGHGCWIQPSYRSQSEIEPGDDWTFCASTRSGCC
Sbjct: 1 MVFGWGKGKAKPEKPVEPEPPKVPRIDLSKPRWDQSTFEGRARHFFSTTNPLNSLASDAELDRAKTLLEQYKAGTEPPGTTEEQVWEAKHLYDSAYHPETGEKLFLPGRMSFQVPGNMVITGCMMQFYRSIPAVVFWQWVNQSFNAIVNYSNRNACLCGHGCWIQPSYRSQSEIEPGDDWTFCASTRSGCC 191
BLAST of EWM27515.1 vs. NCBI_GenBank
Match: gi|673050267|ref|XP_008879094.1| (hypothetical protein H310_13386 [Aphanomyces invadans] >gi|574465304|gb|ETV92343.1| hypothetical protein H310_13386 [Aphanomyces invadans]) HSP 1 Score: 230.72 bits (587), Expect = 1.976e-72 Identity = 102/131 (77.86%), Postives = 117/131 (89.31%), Query Frame = 0
Query: 25 RIDLSKPRWDQSTFEGRARHFFSTTNPLNSLASDAELDRAKTLLEQYKAGTEPPGTTEEQVWEAKHLYDSAYHPETGEKLFLPGRMSFQVPGNMVITGCMMQFYRSIPAVVFWQWVNQSFNAIVNYSNRNA 155
RI+L PRWDQSTFEGRA+HFF+TTNP+N LASD ELD AK+L+EQY+ G EP GTT EQVW AKHLYDSA+HP+TGEK F+ GRMSFQVPGNMVITGCMM FYRS PAVVFWQ++NQ+FN+IVNY+NRNA
Sbjct: 5 RINLDAPRWDQSTFEGRAKHFFTTTNPINVLASDEELDAAKSLVEQYRRGAEPAGTTPEQVWAAKHLYDSAFHPDTGEKNFILGRMSFQVPGNMVITGCMMAFYRSTPAVVFWQFMNQTFNSIVNYTNRNA 135
BLAST of EWM27515.1 vs. NCBI_GenBank
Match: gi|698818449|ref|XP_009842253.1| (hypothetical protein H257_15751 [Aphanomyces astaci] >gi|574102761|gb|ETV68309.1| hypothetical protein H257_15751 [Aphanomyces astaci]) HSP 1 Score: 228.024 bits (580), Expect = 2.490e-71 Identity = 99/131 (75.57%), Postives = 116/131 (88.55%), Query Frame = 0
Query: 25 RIDLSKPRWDQSTFEGRARHFFSTTNPLNSLASDAELDRAKTLLEQYKAGTEPPGTTEEQVWEAKHLYDSAYHPETGEKLFLPGRMSFQVPGNMVITGCMMQFYRSIPAVVFWQWVNQSFNAIVNYSNRNA 155
R++L PRWDQSTFEGRARHFF+TTNP+N LA+D +LD AK L++QY+ G EP GTT EQVW AKHLYDSA+HP+TGEK F+ GRMSFQVPGNMVITGCMM FYRS PAVVFWQ++NQ+FN+IVNY+NRNA
Sbjct: 5 RLNLDAPRWDQSTFEGRARHFFTTTNPINVLATDEQLDAAKALVQQYQGGAEPAGTTPEQVWAAKHLYDSAFHPDTGEKNFIMGRMSFQVPGNMVITGCMMAFYRSTPAVVFWQFMNQTFNSIVNYTNRNA 135
BLAST of EWM27515.1 vs. NCBI_GenBank
Match: gi|669140956|ref|XP_008606046.1| (hypothetical protein SDRG_02248 [Saprolegnia diclina VS20] >gi|530742105|gb|EQC40347.1| hypothetical protein SDRG_02248 [Saprolegnia diclina VS20]) HSP 1 Score: 227.254 bits (578), Expect = 4.197e-71 Identity = 98/131 (74.81%), Postives = 116/131 (88.55%), Query Frame = 0
Query: 25 RIDLSKPRWDQSTFEGRARHFFSTTNPLNSLASDAELDRAKTLLEQYKAGTEPPGTTEEQVWEAKHLYDSAYHPETGEKLFLPGRMSFQVPGNMVITGCMMQFYRSIPAVVFWQWVNQSFNAIVNYSNRNA 155
R++L +PRWDQSTFEGRA+HF +TTNPLN LASDA+LD AK L+EQYKAGTEP G +E VW AKHLYDSA+HP+TGEK F+ GRM+FQVPGNM ITGCMM FYRS PAV+FWQ++NQ+FN+IVNY+NRNA
Sbjct: 4 RLNLDEPRWDQSTFEGRAKHFLTTTNPLNVLASDADLDAAKALIEQYKAGTEPAGIKDEDVWAAKHLYDSAFHPDTGEKNFILGRMAFQVPGNMAITGCMMTFYRSTPAVIFWQFMNQTFNSIVNYTNRNA 134
BLAST of EWM27515.1 vs. NCBI_GenBank
Match: gi|1173947885|gb|OQR96057.1| (sideroflexin-1-like protein [Achlya hypogyna]) HSP 1 Score: 224.942 bits (572), Expect = 3.941e-70 Identity = 98/131 (74.81%), Postives = 115/131 (87.79%), Query Frame = 0
Query: 25 RIDLSKPRWDQSTFEGRARHFFSTTNPLNSLASDAELDRAKTLLEQYKAGTEPPGTTEEQVWEAKHLYDSAYHPETGEKLFLPGRMSFQVPGNMVITGCMMQFYRSIPAVVFWQWVNQSFNAIVNYSNRNA 155
R++L +PRWDQSTFEGRA+HF +TTNPLN LASDAELD AK L+EQYK G EP GT +E VW AKHLYDSA+HP+TGEK F+ GRMSFQVPGNM ITGCM+ FYRS PAV+FWQ++NQ+FN+IVNY+NRNA
Sbjct: 4 RLNLDEPRWDQSTFEGRAKHFLTTTNPLNVLASDAELDAAKMLVEQYKRGAEPAGTKDEDVWAAKHLYDSAFHPDTGEKNFILGRMSFQVPGNMAITGCMLTFYRSTPAVIFWQFMNQTFNSIVNYTNRNA 134
BLAST of EWM27515.1 vs. NCBI_GenBank
Match: gi|813165342|ref|XP_012203729.1| (hypothetical protein SPRG_08736 [Saprolegnia parasitica CBS 223.65] >gi|641531474|gb|KDO25546.1| hypothetical protein SPRG_08736 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 224.172 bits (570), Expect = 6.022e-70 Identity = 97/131 (74.05%), Postives = 115/131 (87.79%), Query Frame = 0
Query: 25 RIDLSKPRWDQSTFEGRARHFFSTTNPLNSLASDAELDRAKTLLEQYKAGTEPPGTTEEQVWEAKHLYDSAYHPETGEKLFLPGRMSFQVPGNMVITGCMMQFYRSIPAVVFWQWVNQSFNAIVNYSNRNA 155
R++L +PRWDQSTFEGRA+HF +TTNPLN LASDA+LD AK L+EQYKAG EP G +E VW AKHLYDSA+HP+TGEK F+ GRM+FQVPGNM ITGCMM FYRS PAV+FWQ++NQ+FN+IVNY+NRNA
Sbjct: 4 RLNLDEPRWDQSTFEGRAKHFLTTTNPLNVLASDADLDAAKALVEQYKAGREPAGIKDEDVWAAKHLYDSAFHPDTGEKNFILGRMAFQVPGNMAITGCMMTFYRSTPAVIFWQFMNQTFNSIVNYTNRNA 134
BLAST of EWM27515.1 vs. NCBI_GenBank
Match: gi|1173959859|gb|OQS06043.1| (sideroflexin-1 [Thraustotheca clavata]) HSP 1 Score: 223.402 bits (568), Expect = 7.980e-66 Identity = 99/131 (75.57%), Postives = 115/131 (87.79%), Query Frame = 0
Query: 25 RIDLSKPRWDQSTFEGRARHFFSTTNPLNSLASDAELDRAKTLLEQYKAGTEPPGTTEEQVWEAKHLYDSAYHPETGEKLFLPGRMSFQVPGNMVITGCMMQFYRSIPAVVFWQWVNQSFNAIVNYSNRNA 155
R++L PRWDQSTF GRA+ FF+TTNPLN LASDAELD AK L+EQYKAGTEP GT +E VW AKHLYDSA+HP+TGEK F+ GRM+FQVPGNM ITGCMM FYRS PAV+FWQ++NQ+FN+IVNY+NRNA
Sbjct: 3 RLNLDDPRWDQSTFTGRAKFFFTTTNPLNVLASDAELDAAKLLVEQYKAGTEPAGTKDEDVWAAKHLYDSAFHPDTGEKNFILGRMAFQVPGNMAITGCMMTFYRSTPAVIFWQFMNQTFNSIVNYTNRNA 133
BLAST of EWM27515.1 vs. NCBI_GenBank
Match: gi|443699275|gb|ELT98842.1| (hypothetical protein CAPTEDRAFT_145479 [Capitella teleta]) HSP 1 Score: 204.527 bits (519), Expect = 1.795e-64 Identity = 88/129 (68.22%), Postives = 111/129 (86.05%), Query Frame = 0
Query: 25 RIDLSKPRWDQSTFEGRARHFFSTTNPLNSLASDAELDRAKTLLEQYKAGTEPPGTTEEQVWEAKHLYDSAYHPETGEKLFLPGRMSFQVPGNMVITGCMMQFYRSIPAVVFWQWVNQSFNAIVNYSNR 153
RI+L++PR+DQ T+ GRA+HFF+TTNPLN AS A+L++AK L+ QY+ G EP GTT++QVW AK+LYDSA+HP+TGEK+F+ GRMS QVP NM ITGCMM FYR+ PAV+FWQW NQSFNA+VNY+NR
Sbjct: 5 RINLNEPRFDQGTYTGRAKHFFNTTNPLNLFASGADLEKAKLLVNQYRQGIEPSGTTDDQVWRAKNLYDSAFHPDTGEKMFMLGRMSAQVPVNMTITGCMMTFYRTTPAVIFWQWFNQSFNAVVNYTNR 133
BLAST of EWM27515.1 vs. NCBI_GenBank
Match: gi|301112082|ref|XP_002905120.1| (sideroflexin-1-like protein [Phytophthora infestans T30-4] >gi|262095450|gb|EEY53502.1| sideroflexin-1-like protein [Phytophthora infestans T30-4]) HSP 1 Score: 207.994 bits (528), Expect = 1.685e-63 Identity = 91/130 (70.00%), Postives = 113/130 (86.92%), Query Frame = 0
Query: 26 IDLSKPRWDQSTFEGRARHFFSTTNPLNSLASDAELDRAKTLLEQYKAGTEPPGTTEEQVWEAKHLYDSAYHPETGEKLFLPGRMSFQVPGNMVITGCMMQFYRSIPAVVFWQWVNQSFNAIVNYSNRNA 155
++L PRWDQST+ GRA+HFF+TTNPLN LASDAELD AK L+E+YKAG + P +E+++W AK L DSA+HP+TGEK FL GRM+FQVPGNM+ITGCMM FYRS PAV+FWQ++NQ+FN+IVNY+NRNA
Sbjct: 6 VNLDAPRWDQSTYTGRAKHFFATTNPLNVLASDAELDAAKQLVEEYKAG-QHPNLSEDEIWNAKQLVDSAFHPDTGEKNFLAGRMAFQVPGNMIITGCMMTFYRSTPAVIFWQFMNQTFNSIVNYTNRNA 134
BLAST of EWM27515.1 vs. NCBI_GenBank
Match: gi|953487524|emb|CEG48352.1| (sideroflexin-1-like protein [Plasmopara halstedii]) HSP 1 Score: 206.453 bits (524), Expect = 3.807e-63 Identity = 90/130 (69.23%), Postives = 113/130 (86.92%), Query Frame = 0
Query: 26 IDLSKPRWDQSTFEGRARHFFSTTNPLNSLASDAELDRAKTLLEQYKAGTEPPGTTEEQVWEAKHLYDSAYHPETGEKLFLPGRMSFQVPGNMVITGCMMQFYRSIPAVVFWQWVNQSFNAIVNYSNRNA 155
++L +PRWDQST+ GRA+HFF+TTNPLN LASDA+LD AK L+E+YKAG P +EE++W AK L DSA+HP+TGEK FL GRM+FQVPGNM+I+GCMM FYRS PAV+FWQ++NQ+FN+IVNY+NRNA
Sbjct: 6 VNLDEPRWDQSTYSGRAKHFFATTNPLNVLASDADLDAAKRLVEEYKAGLHP-NLSEEEIWSAKQLVDSAFHPDTGEKNFLAGRMAFQVPGNMIISGCMMTFYRSTPAVIFWQFMNQTFNSIVNYTNRNA 134 The following BLAST results are available for this feature:
BLAST of EWM27515.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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