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Properties
| Property Name | Value |
|---|
| Product | Ribosomal protein L18e/L15P |
| Orig transcript id | gnl|cribi|Naga_100015g48.6415.mrna |
| Orig protein id | gnl|cribi|Naga_100015g48.6415 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:745752..747443 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3114 ID=rna3114|Name=rna3114|organism=Nannochloropsis gaditana|type=mRNA|length=1212bp
ATGTCATCTGCTATGGCTGTCCCGAGAGCACGTCAAGTGCAGGATGATGA
GGACGATGATATGGTATTACTTGCGAAGCTACTGCGGGAAGAGGAGGACC
GAGAACAGGAATCACTCTTCGCTAGTGACAGAAGACCTGATCCCATTTCT
ACTCTCCCGAAGGGTTTTGCTGGGAATGATGGCGTCAAAGGGATGACAAG
ACCTCATGGTGTTGCTAAGCGTCAGCGCGTCGAGTCTTCTGCAAAAGCCA
AGAACAGGCGCAGTGTCGTGGACCAAGAGGAGGAGGAAGATTGGATCCGC
GTCGCGGATGCAGTCGTACCTATTCGAAGGCCAAAAATCTACAACGACAA
CGACTTATTCCGGAGCCTACAGCTGATGGATTTTGAAAGCGTGCAAGCGC
TGCTCGAGCACGACCGGGAGCTGGTAAGCGCCCGAGACGAGGACTTCGCT
CAGCCCTTGGCAGTGGCTGTTGAGGCGCGCTTTGAAAGAGGGGTCAAGTT
TCTCCTCCACTTGAAATGCCCGCTCCTCGAGGTGGACGGCAGGGGTTACA
GCGCCTTGCACTTGGCGGTGGAGGTCTTTGCGGACATGCCTTTCTTGTTG
CGGTACCTGCTGCAACACGGAGGTATGGACATCAATGCCCGCGCCCCCCC
CTCGCTCGGCCCATGCCCCCTTCACCTGGCATCGGGCACTCGCGCCCTGA
GGCTTCTGCTTGCTTGCGGCGCCGACCCCACGGTCCCGGCCCAAAATGAG
AGGGAAGGGAGCGAGGGAGGAAATGTGCTGGCGTGGGTGGAGCGTACTTG
GCCGCAGACTCGAGAAAAGACCAAGGCGCGCTTCATGCTCGCGTGCCTGT
CGCCCTACCACAGCTTCGTGGTGGCCAAGCTCTGCTTCATTTCCCGCATG
TACGCAGTCCCTGGTGCACCGGGAGCAGCGCCCGCGGCCAACCCTTGCAC
TGGGGCCCGAAGCGCCCGCTTCCCCCCTTCCCCCTCCCTGGTGGCCGTTC
AAGCACGTCCCCCCTCCCACTCCCTCACCCATCGCATCGGGGCTATGATT
GCAAACGCGCGCCTGGACGGGCAGACGGAGGAAGTGAATCCTCTAAAGGA
CGACGAGCATTCGGACGAGGCCGCTCGCGCAGTAACCGTTGCCAATTCAA
GGAAGGACGCGGGTGCTGGGAGGGTCAGGAGTGGCTCTGCCTGCCTCCTT
TGCCGCGGGTGA back to topprotein sequence of rna3114 >rna3114-protein ID=rna3114-protein|Name=rna3114|organism=Nannochloropsis gaditana|type=polypeptide|length=191bp
MGIDLKSGGRRTGHKTRTAPKSDNVYLKLLVKLYRFLARRTDSNFNAVIL
KRLFMSKNNRPPIAISRLVRHMKGKEGKTAVIVGTITDDARMLEVPKLSV
AALKVTATARARILQAGGEILTFDELALRAPKGTNCVLLRGPHDREALSH
FGHRSTVGNVHTHDNVKPYTRSKGRKFEKARGRRRSTGFKV back to topmRNA from alignment at CM002460.1:745752..747443+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3114 ID=rna3114|Name=rna3114|organism=Nannochloropsis gaditana|type=mRNA|length=1692bp|location=Sequence derived from alignment at CM002460.1:745752..747443+ (Nannochloropsis gaditana)
gctgTCGACCGTGGGGTTTTCCCCCTCAAGCAACCTCTCGAGCGAAGgga
gcggcaggaggaggagggtacaTGGGGCCTCGACGCTCAATGAGAGCACG
TATGACGATACACTTGCTTCCAAGCATGGACTAGACCCTTCTTTACGAAG
AGGCTGATAGTTTCCTTCATATTCCTGTGGTTCTGACGTGCCCTTGCAAC
CCTTCTTTATCGTCTTATCGCCATCCATCCTCCTGTGCTTCTTCGTGCCC
GCTCTACCTTGTCCTGCCTAACGCCCCTGTCTCTCGTTCATATCCTGGCA
ATTACAGTGATTCCACAGAGCGATGGGGATCGATCTTAAAAGCGGTGGTC
GCCGTACGGGCCACAAGGTGCGTCGAAATGGGGGGTGGCGGAGACAGGAG
TGGGGTCTAGGCAGTGTGGGATGCGTGCATGCGTTTACAGAGACACCGAG
TTTCCCCTCCAAGTTTCATCAGCACCTTTTTGTGAGAGGACGAATGTTtt
gggcgaggaagcgggagtTTAGACAAAACGACGGGAGCGATGTATGATCG
AGCCGCGTGTGGGTTGTGAAGTGCACTAGTATTGGTTGCGCGGAGGCCGG
ACGGCCAGTGGATGAGTTGAGCGTCGCTAGACACTGTGGGGAAGGGTGGA
TAGGCTCGTAGCTTACGCTCAATTTATGTCTCTCCCGTTCTCCTCAGACC
CGCACGGCCCCCAAGTCGGACAATGTGTATCTGAAGCTGCTGGTCAAGCT
CTACCGCTTTCTGGCCCGACGAACGGATTCAAATTTCAACGCCGTCATCC
TGAAGCGATTGTTCATGTCCAAGAACAACCGTCCCCCCATCGCCATCTCC
CGTCTTGTGCGGCacatgaaggggaaagagggcaaaaCGGCGGTGATCGT
CGGCACCATCACGGACGACGCCCGCATGCTGGAGGTCCCCAAGCTGAGTG
TGGCTGCCCTGAAggtgacggcgacggcgcGGGCGCGCATCTTacaggca
gggggggagattCTGACGTTCGACGAGCTGGCGCTCCGGGCGCCCAAGGG
GACGAACTGCGTGTTGCTGCGCGGACCTCACGACCGAGAGGCCTTGTCGC
ACTTCGGGCACCGCTCCACAGTTGGAAACGTCCACACCCACGACAACGTC
AAGCCGTACACGCGATCAAAGGGCCGAAAGTTCGAGAAGGCCCGTGGTCG
CCGGCGTTCGACGGGTTTCAAGGTctaagaagggaaaggagggggtggcg
gaCGCAGGGAGCCCGGTGCCTGCTGGGGGTAGACGGAAtaggatgggggg
gggggaagatttTTTTTCTCATTGTGAGTTTCTGGACGCTACCCTCGTTG
CCAAGTCCGGAGATAGAAAGGGCAAGGGGTCGGGCCAGAGCACGCGTCAg
ctttttttccatttcttcGCGGAGATGTGTTCACGTAGATCCGGGGGGAT
GTGTGGAAATAGTGGAGCAGAGATTGACGTGAAGGATAGATTGTAACAGG
TCGGGAGCTGGAAAAATCCtcttgaggaggaaagacgctGGGTGCAACGA
AATTtacgagaagaaaaaaatcgaGCTCATACGGTGCGATGACCTATCTG
CTCTCTCAGTGTGGTTGCTACTTGCGTCGATATCATGTTGTGCGTGCGCT
CGTGCCCACGTGATGCAGATCGGGCACTGTGGTGGGTCTCCT back to topCoding sequence (CDS) from alignment at CM002460.1:745752..747443+ >rna3114 ID=rna3114|Name=rna3114|organism=Nannochloropsis gaditana|type=CDS|length=1152bp|location=Sequence derived from alignment at CM002460.1:745752..747443+ (Nannochloropsis gaditana)
ATGGGGATCGATCTTAAAAGCGGTGGTCGCCGTACGGGCCACAAGACCCG
CACGGCCCCCAAGTCGGACAATGTGTATCTGAAGCTGCTGGTCAAGCTCT
ACCGCTTTCTGGCCCGACGAACGGATTCAAATTTCAACGCCGTCATCCTG
AAGCGATTGTTCATGTCCAAGAACAACCGTCCCCCCATCGCCATCTCCCG
TCTTGTGCGGCacatgaaggggaaagagggcaaaaCGGCGGTGATCGTCG
GCACCATCACGGACGACGCCCGCATGCTGGAGGTCCCCAAGCTGAGTGTG
GCTGCCCTGAAggtgacggcgacggcgcGGGCGCGCATCTTacaggcagg
gggggagattCTGACGTTCGACGAGCTGGCGCTCCGGGCGCCCAAGGGGA
CGAACTGCGTGTTGCTGCGCGGACCTCACGACCGAGAGGCCTTGTCGCAC
TTCGGGCACCGCTCCACAGTTGGAAACGTCCACACCCACGACAACGTCAA
GCCGTACACGCGATCAAAGGGCCGAAAGTTCGAGAAGGCCCGTGGTCGCC
GGCGTTCGACGGGTTTCAAGGTctaaATGGGGATCGATCTTAAAAGCGGT
GGTCGCCGTACGGGCCACAAGACCCGCACGGCCCCCAAGTCGGACAATGT
GTATCTGAAGCTGCTGGTCAAGCTCTACCGCTTTCTGGCCCGACGAACGG
ATTCAAATTTCAACGCCGTCATCCTGAAGCGATTGTTCATGTCCAAGAAC
AACCGTCCCCCCATCGCCATCTCCCGTCTTGTGCGGCacatgaaggggaa
agagggcaaaaCGGCGGTGATCGTCGGCACCATCACGGACGACGCCCGCA
TGCTGGAGGTCCCCAAGCTGAGTGTGGCTGCCCTGAAggtgacggcgacg
gcgcGGGCGCGCATCTTacaggcagggggggagattCTGACGTTCGACGA
GCTGGCGCTCCGGGCGCCCAAGGGGACGAACTGCGTGTTGCTGCGCGGAC
CTCACGACCGAGAGGCCTTGTCGCACTTCGGGCACCGCTCCACAGTTGGA
AACGTCCACACCCACGACAACGTCAAGCCGTACACGCGATCAAAGGGCCG
AAAGTTCGAGAAGGCCCGTGGTCGCCGGCGTTCGACGGGTTTCAAGGTct
aa back to top
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